; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0006518 (gene) of Chayote v1 genome

Gene IDSed0006518
OrganismSechium edule (Chayote v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Genome locationLG03:17873801..17874544
RNA-Seq ExpressionSed0006518
SyntenySed0006518
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR013103 - Reverse transcriptase, RNA-dependent DNA polymerase
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PNY13707.1 putative copia-type protein, partial [Trifolium pratense]7.4e-7960.08Show/hide
Query:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR
        ++IYVDDI++ GNND  I +L+ QLG+EF+IKDL  LHYFLG+E     DGL LTQ+KYT DLLLK  M      ATP  L   SS+  D+  ++ATE+R
Subjt:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR

Query:  SLVGSLQYLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSNIISWSSKKQ
        S+VG+LQYLT TRPD+ H+VN+ CQHF  PT  DLK VKRILRYL GT ++G++Y  ++ H LY + DADW GCP+TRRSTTG+CV+LG+N ISWSSKKQ
Subjt:  SLVGSLQYLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSNIISWSSKKQ

Query:  PTVSRSSSEAEYRAMATTTAEITWLTYLFRELCIRLLKPPKLF
        PTV+RSS+EAEYR+MA TTAE+TW+TYL +++ + L + P+LF
Subjt:  PTVSRSSSEAEYRAMATTTAEITWLTYLFRELCIRLLKPPKLF

RVW43526.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera]4.3e-7960.74Show/hide
Query:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR
        ++IYVDDII+TGN++  I+ LIS L  EFS+KDL +LHYFLG+EV   P+GL ++Q KY +DLL    M + +   TPMAL     T FDE PI+ T+YR
Subjt:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR

Query:  SLVGSLQYLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSNIISWSSKKQ
         LVGSLQYLT TRPD+VH+VNK CQHFQ PT  DL+ VKRILRYL GT+++GI+++K SS  L  +CDADW GC  TRRST+G+C++LG+N ISWSSK+Q
Subjt:  SLVGSLQYLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSNIISWSSKKQ

Query:  PTVSRSSSEAEYRAMATTTAEITWLTYLFRELCIRLLKPPKL
        PTVSRSS+EAEYR++A++ AEITWLT+L R++ I+L +PP+L
Subjt:  PTVSRSSSEAEYRAMATTTAEITWLTYLFRELCIRLLKPPKL

RVX04530.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera]4.3e-7960.74Show/hide
Query:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR
        ++IYVDDII+TGN++  I+ LIS L  EFS+KDL +LHYFLG+EV   P+GL ++Q KY +DLL    M + +   TPMAL     T FDE PI+ T+YR
Subjt:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR

Query:  SLVGSLQYLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSNIISWSSKKQ
         LVGSLQYLT TRPD+VH+VNK CQHFQ PT  DL+ VKRILRYL GT+++GI+++K SS  L  +CDADW GC  TRRST+G+C++LG+N ISWSSK+Q
Subjt:  SLVGSLQYLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSNIISWSSKKQ

Query:  PTVSRSSSEAEYRAMATTTAEITWLTYLFRELCIRLLKPPKL
        PTVSRSS+EAEYR++A++ AEITWLT+L R++ I+L +PP+L
Subjt:  PTVSRSSSEAEYRAMATTTAEITWLTYLFRELCIRLLKPPKL

XP_022139305.1 uncharacterized protein LOC111010253 isoform X1 [Momordica charantia]1.3e-8062.81Show/hide
Query:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR
        M++YVDDII+TG++ + I  L+SQLG EFS+KDL  LHYFLGIEVH T  GLML+Q KY +++L KA M +AS  +TPM+ +  SS+  D + I+AT+YR
Subjt:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR

Query:  SLVGSLQYLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSNIISWSSKKQ
        SLVGSLQYLTLTRPD+  +VNK CQH   P  KDL  VK ILRYL GTL YGI +YK+SS +LYA+CDADWGGCP TRRST+G C++LGSN I WSSKKQ
Subjt:  SLVGSLQYLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSNIISWSSKKQ

Query:  PTVSRSSSEAEYRAMATTTAEITWLTYLFRELCIRLLKPPKL
         TV+RSSSEAEYRAMAT  A++TW+T++ +++ ++L KPP+L
Subjt:  PTVSRSSSEAEYRAMATTTAEITWLTYLFRELCIRLLKPPKL

XP_022141787.1 uncharacterized protein LOC111012071 [Momordica charantia]5.4e-8265.43Show/hide
Query:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR
        M+IYVDDIIL G N   +  LI++LG EF++KDL ALHYFL IEVH TP G MLTQ KYT+D+LLKA M  AS   T MAL+  SS   D D ++AT YR
Subjt:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR

Query:  SLVGSLQYLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSNIISWSSKKQ
        S+VGSLQYLTLTRPD+V++VNKVCQH QT T  + ++VKRILRYL GTL +GI ++K+S+ +LYA+CDADWGGCP TRRSTTG+C++L +N ISWSSKKQ
Subjt:  SLVGSLQYLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSNIISWSSKKQ

Query:  PTVSRSSSEAEYRAMATTTAEITWLTYLFRELCIRLLKPPKLF
        PT++RSS+EAEYRAMA TTAE+TWLT+LFR++ I L +PP  F
Subjt:  PTVSRSSSEAEYRAMATTTAEITWLTYLFRELCIRLLKPPKLF

TrEMBL top hitse value%identityAlignment
A0A2K3PEI5 Putative copia-type protein (Fragment)3.6e-7960.08Show/hide
Query:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR
        ++IYVDDI++ GNND  I +L+ QLG+EF+IKDL  LHYFLG+E     DGL LTQ+KYT DLLLK  M      ATP  L   SS+  D+  ++ATE+R
Subjt:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR

Query:  SLVGSLQYLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSNIISWSSKKQ
        S+VG+LQYLT TRPD+ H+VN+ CQHF  PT  DLK VKRILRYL GT ++G++Y  ++ H LY + DADW GCP+TRRSTTG+CV+LG+N ISWSSKKQ
Subjt:  SLVGSLQYLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSNIISWSSKKQ

Query:  PTVSRSSSEAEYRAMATTTAEITWLTYLFRELCIRLLKPPKLF
        PTV+RSS+EAEYR+MA TTAE+TW+TYL +++ + L + P+LF
Subjt:  PTVSRSSSEAEYRAMATTTAEITWLTYLFRELCIRLLKPPKLF

A0A438E6Z5 Retrovirus-related Pol polyprotein from transposon TNT 1-942.1e-7960.74Show/hide
Query:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR
        ++IYVDDII+TGN++  I+ LIS L  EFS+KDL +LHYFLG+EV   P+GL ++Q KY +DLL    M + +   TPMAL     T FDE PI+ T+YR
Subjt:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR

Query:  SLVGSLQYLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSNIISWSSKKQ
         LVGSLQYLT TRPD+VH+VNK CQHFQ PT  DL+ VKRILRYL GT+++GI+++K SS  L  +CDADW GC  TRRST+G+C++LG+N ISWSSK+Q
Subjt:  SLVGSLQYLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSNIISWSSKKQ

Query:  PTVSRSSSEAEYRAMATTTAEITWLTYLFRELCIRLLKPPKL
        PTVSRSS+EAEYR++A++ AEITWLT+L R++ I+L +PP+L
Subjt:  PTVSRSSSEAEYRAMATTTAEITWLTYLFRELCIRLLKPPKL

A0A438J6E1 Retrovirus-related Pol polyprotein from transposon RE12.1e-7960.74Show/hide
Query:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR
        ++IYVDDII+TGN++  I+ LIS L  EFS+KDL +LHYFLG+EV   P+GL ++Q KY +DLL    M + +   TPMAL     T FDE PI+ T+YR
Subjt:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR

Query:  SLVGSLQYLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSNIISWSSKKQ
         LVGSLQYLT TRPD+VH+VNK CQHFQ PT  DL+ VKRILRYL GT+++GI+++K SS  L  +CDADW GC  TRRST+G+C++LG+N ISWSSK+Q
Subjt:  SLVGSLQYLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSNIISWSSKKQ

Query:  PTVSRSSSEAEYRAMATTTAEITWLTYLFRELCIRLLKPPKL
        PTVSRSS+EAEYR++A++ AEITWLT+L R++ I+L +PP+L
Subjt:  PTVSRSSSEAEYRAMATTTAEITWLTYLFRELCIRLLKPPKL

A0A6J1CBZ1 uncharacterized protein LOC111010253 isoform X16.5e-8162.81Show/hide
Query:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR
        M++YVDDII+TG++ + I  L+SQLG EFS+KDL  LHYFLGIEVH T  GLML+Q KY +++L KA M +AS  +TPM+ +  SS+  D + I+AT+YR
Subjt:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR

Query:  SLVGSLQYLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSNIISWSSKKQ
        SLVGSLQYLTLTRPD+  +VNK CQH   P  KDL  VK ILRYL GTL YGI +YK+SS +LYA+CDADWGGCP TRRST+G C++LGSN I WSSKKQ
Subjt:  SLVGSLQYLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSNIISWSSKKQ

Query:  PTVSRSSSEAEYRAMATTTAEITWLTYLFRELCIRLLKPPKL
         TV+RSSSEAEYRAMAT  A++TW+T++ +++ ++L KPP+L
Subjt:  PTVSRSSSEAEYRAMATTTAEITWLTYLFRELCIRLLKPPKL

A0A6J1CKU6 uncharacterized protein LOC1110120712.6e-8265.43Show/hide
Query:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR
        M+IYVDDIIL G N   +  LI++LG EF++KDL ALHYFL IEVH TP G MLTQ KYT+D+LLKA M  AS   T MAL+  SS   D D ++AT YR
Subjt:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR

Query:  SLVGSLQYLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSNIISWSSKKQ
        S+VGSLQYLTLTRPD+V++VNKVCQH QT T  + ++VKRILRYL GTL +GI ++K+S+ +LYA+CDADWGGCP TRRSTTG+C++L +N ISWSSKKQ
Subjt:  SLVGSLQYLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSNIISWSSKKQ

Query:  PTVSRSSSEAEYRAMATTTAEITWLTYLFRELCIRLLKPPKLF
        PT++RSS+EAEYRAMA TTAE+TWLT+LFR++ I L +PP  F
Subjt:  PTVSRSSSEAEYRAMATTTAEITWLTYLFRELCIRLLKPPKLF

SwissProt top hitse value%identityAlignment
P04146 Copia protein5.9e-3131.58Show/hide
Query:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR
        +++YVDD+++   +   + +    L ++F + DL  + +F+GI +    D + L+Q  Y + +L K  M + +  +TP+  +  +  + + D    T  R
Subjt:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR

Query:  SLVGSLQYLTL-TRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSS--HHLYAYCDADWGGCPITRRSTTGFCVYL-GSNIISWS
        SL+G L Y+ L TRPDL  +VN + ++      +  + +KR+LRYL GT+D  + + K+ +  + +  Y D+DW G  I R+STTG+   +   N+I W+
Subjt:  SLVGSLQYLTL-TRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSS--HHLYAYCDADWGGCPITRRSTTGFCVYL-GSNIISWS

Query:  SKKQPTVSRSSSEAEYRAMATTTAEITWLTYLFRELCIRLLKPPKLF
        +K+Q +V+ SS+EAEY A+     E  WL +L   + I+L  P K++
Subjt:  SKKQPTVSRSSSEAEYRAMATTTAEITWLTYLFRELCIRLLKPPKLF

P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-942.1e-2834.85Show/hide
Query:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEV--HPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMA------LAPCSSTIFDED
        +++YVDD+++ G +   IA L   L K F +KDL      LG+++    T   L L+Q+KY + +L +  M +A   +TP+A         C +T+ ++ 
Subjt:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEV--HPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMA------LAPCSSTIFDED

Query:  PINATEYRSLVGSLQY-LTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSN
         +    Y S VGSL Y +  TRPD+ H+V  V +  + P  +  + VK ILRYL GT       +  S   L  Y DAD  G    R+S+TG+       
Subjt:  PINATEYRSLVGSLQY-LTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSN

Query:  IISWSSKKQPTVSRSSSEAEYRAMATTTAEITWLTYLFREL
         ISW SK Q  V+ S++EAEY A   T  E+ WL    +EL
Subjt:  IISWSSKKQPTVSRSSSEAEYRAMATTTAEITWLTYLFREL

P92519 Uncharacterized mitochondrial protein AtMg008102.6e-6352.23Show/hide
Query:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR
        +++YVDDI+LTG+++  +  LI QL   FS+KDL  +HYFLGI++   P GL L+Q KY + +L  AGM D    +TP+ L   SS    + P + +++R
Subjt:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR

Query:  SLVGSLQYLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSNIISWSSKKQ
        S+VG+LQYLTLTRPD+ ++VN VCQ    PT  D   +KR+LRY+ GT+ +G+  +K+S  ++ A+CD+DW GC  TRRSTTGFC +LG NIISWS+K+Q
Subjt:  SLVGSLQYLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSNIISWSSKKQ

Query:  PTVSRSSSEAEYRAMATTTAEITW
        PTVSRSS+E EYRA+A T AE+TW
Subjt:  PTVSRSSSEAEYRAMATTTAEITW

Q94HW2 Retrovirus-related Pol polyprotein from transposon RE12.2e-5748.15Show/hide
Query:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR
        M++YVDDI++TGN+   + + +  L + FS+KD   LHYFLGIE    P GL L+Q++Y  DLL +  M  A    TPMA +P  S        + TEYR
Subjt:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR

Query:  SLVGSLQYLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSNIISWSSKKQ
         +VGSLQYL  TRPD+ ++VN++ Q    PT + L+ +KRILRYLAGT ++GI   K ++  L+AY DADW G      ST G+ VYLG + ISWSSKKQ
Subjt:  SLVGSLQYLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSNIISWSSKKQ

Query:  PTVSRSSSEAEYRAMATTTAEITWLTYLFRELCIRLLKPPKLF
          V RSS+EAEYR++A T++E+ W+  L  EL IRL +PP ++
Subjt:  PTVSRSSSEAEYRAMATTTAEITWLTYLFRELCIRLLKPPKLF

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE23.1e-5647.74Show/hide
Query:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR
        M++YVDDI++TGN+   +   +  L + FS+K+   LHYFLGIE    P GL L+Q++YT DLL +  M  A   ATPMA +P  +        + TEYR
Subjt:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR

Query:  SLVGSLQYLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSNIISWSSKKQ
         +VGSLQYL  TRPDL ++VN++ Q+   PT      +KR+LRYLAGT D+GI   K ++  L+AY DADW G      ST G+ VYLG + ISWSSKKQ
Subjt:  SLVGSLQYLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSNIISWSSKKQ

Query:  PTVSRSSSEAEYRAMATTTAEITWLTYLFRELCIRLLKPPKLF
          V RSS+EAEYR++A T++E+ W+  L  EL I+L  PP ++
Subjt:  PTVSRSSSEAEYRAMATTTAEITWLTYLFRELCIRLLKPPKLF

Arabidopsis top hitse value%identityAlignment
AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 81.0e-4941.98Show/hide
Query:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR
        +++YVDDII+  NND  +  L SQL   F ++DL  L YFLG+E+  +  G+ + Q+KY  DLL + G+     S+ PM  +   S     D ++A  YR
Subjt:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR

Query:  SLVGSLQYLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSNIISWSSKKQ
         L+G L YL +TR D+  +VNK+ Q  + P     + V +IL Y+ GT+  G+ Y   +   L  + DA +  C  TRRST G+C++LG+++ISW SKKQ
Subjt:  SLVGSLQYLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSNIISWSSKKQ

Query:  PTVSRSSSEAEYRAMATTTAEITWLTYLFRELCIRLLKPPKLF
          VS+SS+EAEYRA++  T E+ WL   FREL + L KP  LF
Subjt:  PTVSRSSSEAEYRAMATTTAEITWLTYLFRELCIRLLKPPKLF

ATMG00240.1 Gag-Pol-related retrotransposon family protein6.8e-1443.59Show/hide
Query:  YLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFC
        YLT+TRPDL  +VN++ Q         ++ V ++L Y+ GT+  G+ Y   S   L A+ D+DW  CP TRRS TGFC
Subjt:  YLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFC

ATMG00810.1 DNA/RNA polymerases superfamily protein1.9e-6452.23Show/hide
Query:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR
        +++YVDDI+LTG+++  +  LI QL   FS+KDL  +HYFLGI++   P GL L+Q KY + +L  AGM D    +TP+ L   SS    + P + +++R
Subjt:  MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYR

Query:  SLVGSLQYLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSNIISWSSKKQ
        S+VG+LQYLTLTRPD+ ++VN VCQ    PT  D   +KR+LRY+ GT+ +G+  +K+S  ++ A+CD+DW GC  TRRSTTGFC +LG NIISWS+K+Q
Subjt:  SLVGSLQYLTLTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSNIISWSSKKQ

Query:  PTVSRSSSEAEYRAMATTTAEITW
        PTVSRSS+E EYRA+A T AE+TW
Subjt:  PTVSRSSSEAEYRAMATTTAEITW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGATCTATGTGGATGATATCATATTAACAGGAAACAATGATGAATGTATTGCAAGTCTAATATCTCAGCTAGGCAAAGAGTTCTCTATTAAGGACCTTAGGGCTCT
ACATTACTTCTTGGGTATTGAGGTTCATCCCACACCAGATGGACTCATGCTAACTCAAAAGAAATACACCCAGGATCTGCTTCTAAAGGCAGGCATGACAGATGCTTCAA
TAAGTGCTACTCCTATGGCTCTTGCTCCATGCTCAAGTACCATATTTGATGAGGATCCAATAAATGCAACTGAGTATAGAAGTTTAGTGGGGTCTCTACAATACTTAACT
CTCACTAGGCCGGATTTAGTTCATTCTGTAAACAAGGTGTGTCAACATTTTCAAACACCCACTTATAAGGACTTAAAAGAAGTAAAACGAATTCTAAGGTACTTAGCTGG
AACTTTAGACTACGGAATCAAGTATTATAAACACAGCAGCCACCATCTATATGCCTATTGTGATGCTGATTGGGGGGGATGCCCGATAACTAGACGAAGCACAACAGGTT
TTTGTGTATATCTTGGATCCAATATTATCTCATGGTCATCAAAGAAACAGCCAACAGTGTCTCGATCTAGCTCAGAAGCAGAATATCGTGCTATGGCTACAACAACTGCT
GAAATTACTTGGCTTACCTATCTATTTCGAGAACTCTGTATTCGTCTACTCAAACCCCCTAAACTATTTTTTGCGATAATATGA
mRNA sequenceShow/hide mRNA sequence
ATGATGATCTATGTGGATGATATCATATTAACAGGAAACAATGATGAATGTATTGCAAGTCTAATATCTCAGCTAGGCAAAGAGTTCTCTATTAAGGACCTTAGGGCTCT
ACATTACTTCTTGGGTATTGAGGTTCATCCCACACCAGATGGACTCATGCTAACTCAAAAGAAATACACCCAGGATCTGCTTCTAAAGGCAGGCATGACAGATGCTTCAA
TAAGTGCTACTCCTATGGCTCTTGCTCCATGCTCAAGTACCATATTTGATGAGGATCCAATAAATGCAACTGAGTATAGAAGTTTAGTGGGGTCTCTACAATACTTAACT
CTCACTAGGCCGGATTTAGTTCATTCTGTAAACAAGGTGTGTCAACATTTTCAAACACCCACTTATAAGGACTTAAAAGAAGTAAAACGAATTCTAAGGTACTTAGCTGG
AACTTTAGACTACGGAATCAAGTATTATAAACACAGCAGCCACCATCTATATGCCTATTGTGATGCTGATTGGGGGGGATGCCCGATAACTAGACGAAGCACAACAGGTT
TTTGTGTATATCTTGGATCCAATATTATCTCATGGTCATCAAAGAAACAGCCAACAGTGTCTCGATCTAGCTCAGAAGCAGAATATCGTGCTATGGCTACAACAACTGCT
GAAATTACTTGGCTTACCTATCTATTTCGAGAACTCTGTATTCGTCTACTCAAACCCCCTAAACTATTTTTTGCGATAATATGA
Protein sequenceShow/hide protein sequence
MMIYVDDIILTGNNDECIASLISQLGKEFSIKDLRALHYFLGIEVHPTPDGLMLTQKKYTQDLLLKAGMTDASISATPMALAPCSSTIFDEDPINATEYRSLVGSLQYLT
LTRPDLVHSVNKVCQHFQTPTYKDLKEVKRILRYLAGTLDYGIKYYKHSSHHLYAYCDADWGGCPITRRSTTGFCVYLGSNIISWSSKKQPTVSRSSSEAEYRAMATTTA
EITWLTYLFRELCIRLLKPPKLFFAII