| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6577717.1 hypothetical protein SDJN03_25291, partial [Cucurbita argyrosperma subsp. sororia] | 2.5e-97 | 76.87 | Show/hide |
Query: MATLESAIPIIYQYTCSSCSSSSCCSRKAKSSLSKLPSAIKLRISFSSPLLSLTPSLS------FLSNPSPNRSSSSSSLPRLCSAIQEELSLDEAS---
MATLESAIPII QY SS S K S KLPSAIKLRISFSSPLLSL P+ + FL+NPS NR R CSA+Q E+SL+EAS
Subjt: MATLESAIPIIYQYTCSSCSSSSCCSRKAKSSLSKLPSAIKLRISFSSPLLSLTPSLS------FLSNPSPNRSSSSSSLPRLCSAIQEELSLDEAS---
Query: -DQNQKRKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQKNGRSRGFAFLTMSSPDQAQAAIDKFNSQEISGRVIQVEFAKRLKKPPPPKPPGPPPGE
D NQKRKLYIFNLPWS SVVDIK+ FGQCGTVTDVEIIKQKNGRSRGFAF+TM+SPD+AQAAI KF+SQEISGRVI+VEFAKRLKKPPPPKPPGPPPGE
Subjt: -DQNQKRKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQKNGRSRGFAFLTMSSPDQAQAAIDKFNSQEISGRVIQVEFAKRLKKPPPPKPPGPPPGE
Query: TVNKLYVSNLAWKVRSSNLRDMLSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKE
TV+KLYVSNLAWK RS+NLR+ SENFNPIAARVVFDSPSG+SAGYGFVSFATREEAETALSSLEGKE
Subjt: TVNKLYVSNLAWKVRSSNLRDMLSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKE
|
|
| XP_008448669.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Cucumis melo] | 2.8e-96 | 77.48 | Show/hide |
Query: MATLESAIPIIYQYTCSSCSSSSCCSRKAKSSLSKLPSAIKLRISFSSPLLSLTPSLSFLSNPSPNRSSSSSSLPRLCSAIQEELSLDEAS----DQNQK
MATLESA+PII Y SS SS C +KLPSAIKLRISFSSPLLSL P +S S N S + RLCSA+Q E+SL+EAS D NQK
Subjt: MATLESAIPIIYQYTCSSCSSSSCCSRKAKSSLSKLPSAIKLRISFSSPLLSLTPSLSFLSNPSPNRSSSSSSLPRLCSAIQEELSLDEAS----DQNQK
Query: RKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQKNGRSRGFAFLTMSSPDQAQAAIDKFNSQEISGRVIQVEFAKRLKKPPPPKPPGPPPGETVNKLY
+KLYIFNLPWSLSVVDIK+LFGQCGTV+DVEIIKQKNGRSRGFAF+TM+SPD+AQAAI KF+SQEISGRVI+VEFAKR K+PPPPKPPGPPPGETVNKLY
Subjt: RKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQKNGRSRGFAFLTMSSPDQAQAAIDKFNSQEISGRVIQVEFAKRLKKPPPPKPPGPPPGETVNKLY
Query: VSNLAWKVRSSNLRDMLSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKE
VSNLAWKVRSSNLRD SE+FNPIAARVVFDSPSGRSAGYGFVSFATREEA+TALSSLEGKE
Subjt: VSNLAWKVRSSNLRDMLSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKE
|
|
| XP_022923294.1 33 kDa ribonucleoprotein, chloroplastic [Cucurbita moschata] | 4.3e-97 | 76.49 | Show/hide |
Query: MATLESAIPIIYQYTCSSCSSSSCCSRKAKSSLSKLPSAIKLRISFSSPLLSLTPSLS------FLSNPSPNRSSSSSSLPRLCSAIQEELSLDEAS---
MATLESAIPII QY SS SS K S+ LPSAIKLRISFSSPLLS P+ + FL+NPS NR R CSA+Q E+SL+EAS
Subjt: MATLESAIPIIYQYTCSSCSSSSCCSRKAKSSLSKLPSAIKLRISFSSPLLSLTPSLS------FLSNPSPNRSSSSSSLPRLCSAIQEELSLDEAS---
Query: -DQNQKRKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQKNGRSRGFAFLTMSSPDQAQAAIDKFNSQEISGRVIQVEFAKRLKKPPPPKPPGPPPGE
D NQKRKLYIFNLPWS SVVDIK+ FGQCGTVTDVEIIKQKNGRSRGFAF+TM+SPD+AQAAI KF+SQEISGRVI+VEFAKRLKKPPPPKPPGPPPGE
Subjt: -DQNQKRKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQKNGRSRGFAFLTMSSPDQAQAAIDKFNSQEISGRVIQVEFAKRLKKPPPPKPPGPPPGE
Query: TVNKLYVSNLAWKVRSSNLRDMLSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKE
TV+KLYVSNLAWK RS+NLR+ SENFNPIAARVVFDSPSG+SAGYGFVSFATREEAETALSSLEGKE
Subjt: TVNKLYVSNLAWKVRSSNLRDMLSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKE
|
|
| XP_023007582.1 29 kDa ribonucleoprotein A, chloroplastic [Cucurbita maxima] | 4.6e-99 | 77.99 | Show/hide |
Query: MATLESAIPIIYQYTCSSCSSSSCCSRKAKSSLSKLPSAIKLRISFSSPLLSLTPSLS------FLSNPSPNRSSSSSSLPRLCSAIQEELSLDEAS---
MATLESAIPII QY SS SSSS S +K S KLPSAIKLRISFSSPLLSL P+ + FL+NP NR R CSA+Q E+SL+EAS
Subjt: MATLESAIPIIYQYTCSSCSSSSCCSRKAKSSLSKLPSAIKLRISFSSPLLSLTPSLS------FLSNPSPNRSSSSSSLPRLCSAIQEELSLDEAS---
Query: -DQNQKRKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQKNGRSRGFAFLTMSSPDQAQAAIDKFNSQEISGRVIQVEFAKRLKKPPPPKPPGPPPGE
D NQKRKLYIFNLPWS SVVDIK+ FGQCGTVTDVEIIKQKNGRSRGFAF+TM+SPD+AQAAI KF+SQEISGRVI+VEFAKRLKKPPPPKPPGPPPGE
Subjt: -DQNQKRKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQKNGRSRGFAFLTMSSPDQAQAAIDKFNSQEISGRVIQVEFAKRLKKPPPPKPPGPPPGE
Query: TVNKLYVSNLAWKVRSSNLRDMLSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKE
TV+KLYVSNLAWK RS+NLR+ SENFNPIAARVVFDSPSG+SAGYGFVSFATREEAETALSSLEGKE
Subjt: TVNKLYVSNLAWKVRSSNLRDMLSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKE
|
|
| XP_023551853.1 29 kDa ribonucleoprotein A, chloroplastic [Cucurbita pepo subsp. pepo] | 2.8e-96 | 76.87 | Show/hide |
Query: MATLESAIPIIYQYTCSSCSSSSCCSRKAKSSLSKLPSAIKLRISFSSPLLSLTPSLS------FLSNPSPNRSSSSSSLPRLCSAIQEELSLDEAS---
MATLESAIPII QY SS SSSS +K S LPSAIKLRIS SSPLLSL P+ + FL+NPS NR R SA+Q E+SL+EAS
Subjt: MATLESAIPIIYQYTCSSCSSSSCCSRKAKSSLSKLPSAIKLRISFSSPLLSLTPSLS------FLSNPSPNRSSSSSSLPRLCSAIQEELSLDEAS---
Query: -DQNQKRKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQKNGRSRGFAFLTMSSPDQAQAAIDKFNSQEISGRVIQVEFAKRLKKPPPPKPPGPPPGE
D NQKRKLYIFNLPWS SVVDIK+ FGQCGTVTDVEIIKQKNGRSRGFAF+TM+SPD+AQAAI KF+SQEISGRVI+VEFAKRLKKPPPPKPPGPPPGE
Subjt: -DQNQKRKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQKNGRSRGFAFLTMSSPDQAQAAIDKFNSQEISGRVIQVEFAKRLKKPPPPKPPGPPPGE
Query: TVNKLYVSNLAWKVRSSNLRDMLSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKE
TV+KLYVSNLAWK RS+NLR+ SENFNPIAARVVFDSPSG+SAGYGFVSFATREEAETALSSLEGKE
Subjt: TVNKLYVSNLAWKVRSSNLRDMLSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKE
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0L1U2 Uncharacterized protein | 5.1e-96 | 76.72 | Show/hide |
Query: MATLESAIPIIYQYTCSSCSSSSCCSRKAKSSLSKLPSAIKLRISFSSPLLSLTPSLSFLSNPSPNRSSSSSSLPRLCSAIQEELSLDEAS----DQNQK
M T+ES +PII Y SS SSS+ +K +KLPS IKLRISFSSPLLSL P+ +S S N S + RLCSA+Q E++L+EAS D NQK
Subjt: MATLESAIPIIYQYTCSSCSSSSCCSRKAKSSLSKLPSAIKLRISFSSPLLSLTPSLSFLSNPSPNRSSSSSSLPRLCSAIQEELSLDEAS----DQNQK
Query: RKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQKNGRSRGFAFLTMSSPDQAQAAIDKFNSQEISGRVIQVEFAKRLKKPPPPKPPGPPPGETVNKLY
RKLYIFNLPWSLSVVDIK+LFGQCGTV+DVEIIKQKNGRSRGFAF+TM+SPD+AQAAI KF+SQEISGRVI+VEFAKRLKKPPPPKPPGPPPGETVNKLY
Subjt: RKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQKNGRSRGFAFLTMSSPDQAQAAIDKFNSQEISGRVIQVEFAKRLKKPPPPKPPGPPPGETVNKLY
Query: VSNLAWKVRSSNLRDMLSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKE
VSNLAWKVRS+NLRD SENFNPIAARVVFDSP+GRSAGYGFVSFATREEA+TALSSLEGKE
Subjt: VSNLAWKVRSSNLRDMLSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKE
|
|
| A0A1S3BK84 28 kDa ribonucleoprotein, chloroplastic | 1.3e-96 | 77.48 | Show/hide |
Query: MATLESAIPIIYQYTCSSCSSSSCCSRKAKSSLSKLPSAIKLRISFSSPLLSLTPSLSFLSNPSPNRSSSSSSLPRLCSAIQEELSLDEAS----DQNQK
MATLESA+PII Y SS SS C +KLPSAIKLRISFSSPLLSL P +S S N S + RLCSA+Q E+SL+EAS D NQK
Subjt: MATLESAIPIIYQYTCSSCSSSSCCSRKAKSSLSKLPSAIKLRISFSSPLLSLTPSLSFLSNPSPNRSSSSSSLPRLCSAIQEELSLDEAS----DQNQK
Query: RKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQKNGRSRGFAFLTMSSPDQAQAAIDKFNSQEISGRVIQVEFAKRLKKPPPPKPPGPPPGETVNKLY
+KLYIFNLPWSLSVVDIK+LFGQCGTV+DVEIIKQKNGRSRGFAF+TM+SPD+AQAAI KF+SQEISGRVI+VEFAKR K+PPPPKPPGPPPGETVNKLY
Subjt: RKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQKNGRSRGFAFLTMSSPDQAQAAIDKFNSQEISGRVIQVEFAKRLKKPPPPKPPGPPPGETVNKLY
Query: VSNLAWKVRSSNLRDMLSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKE
VSNLAWKVRSSNLRD SE+FNPIAARVVFDSPSGRSAGYGFVSFATREEA+TALSSLEGKE
Subjt: VSNLAWKVRSSNLRDMLSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKE
|
|
| A0A5A7UAR3 28 kDa ribonucleoprotein | 6.2e-94 | 76.72 | Show/hide |
Query: MATLESAIPIIYQYTCSSCSSSSCCSRKAKSSLSKLPSAIKLRISFSSPLLSLTPSLSFLSNPSPNRSSSSSSLPRLCSAIQEELSLDEAS----DQNQK
MATLESA+PII Y SS SS C +KLPSAIKLRISFSSPLLSL P +S S N S + RLCSA+Q E+SL+EAS D NQK
Subjt: MATLESAIPIIYQYTCSSCSSSSCCSRKAKSSLSKLPSAIKLRISFSSPLLSLTPSLSFLSNPSPNRSSSSSSLPRLCSAIQEELSLDEAS----DQNQK
Query: RKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQKNGRSRGFAFLTMSSPDQAQAAIDKFNSQEISGRVIQVEFAKRLKKPPPPKPPGPPPGETVNKLY
+KLYIFNLPWSLSVVDIK+LFGQCGTV+D IIKQKNGRSRGFAF+TM+SPD+AQAAI KF+SQEISGRVI+VEFAKR K+PPPPKPPGPPPGETVNKLY
Subjt: RKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQKNGRSRGFAFLTMSSPDQAQAAIDKFNSQEISGRVIQVEFAKRLKKPPPPKPPGPPPGETVNKLY
Query: VSNLAWKVRSSNLRDMLSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKE
VSNLAWKVRSSNLRD SE+FNPIAARVVFDSPSGRSAGYGFVSFATREEA+TALSSLEGKE
Subjt: VSNLAWKVRSSNLRDMLSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKE
|
|
| A0A6J1E5Z7 33 kDa ribonucleoprotein, chloroplastic | 2.1e-97 | 76.49 | Show/hide |
Query: MATLESAIPIIYQYTCSSCSSSSCCSRKAKSSLSKLPSAIKLRISFSSPLLSLTPSLS------FLSNPSPNRSSSSSSLPRLCSAIQEELSLDEAS---
MATLESAIPII QY SS SS K S+ LPSAIKLRISFSSPLLS P+ + FL+NPS NR R CSA+Q E+SL+EAS
Subjt: MATLESAIPIIYQYTCSSCSSSSCCSRKAKSSLSKLPSAIKLRISFSSPLLSLTPSLS------FLSNPSPNRSSSSSSLPRLCSAIQEELSLDEAS---
Query: -DQNQKRKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQKNGRSRGFAFLTMSSPDQAQAAIDKFNSQEISGRVIQVEFAKRLKKPPPPKPPGPPPGE
D NQKRKLYIFNLPWS SVVDIK+ FGQCGTVTDVEIIKQKNGRSRGFAF+TM+SPD+AQAAI KF+SQEISGRVI+VEFAKRLKKPPPPKPPGPPPGE
Subjt: -DQNQKRKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQKNGRSRGFAFLTMSSPDQAQAAIDKFNSQEISGRVIQVEFAKRLKKPPPPKPPGPPPGE
Query: TVNKLYVSNLAWKVRSSNLRDMLSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKE
TV+KLYVSNLAWK RS+NLR+ SENFNPIAARVVFDSPSG+SAGYGFVSFATREEAETALSSLEGKE
Subjt: TVNKLYVSNLAWKVRSSNLRDMLSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKE
|
|
| A0A6J1KZ42 29 kDa ribonucleoprotein A, chloroplastic | 2.2e-99 | 77.99 | Show/hide |
Query: MATLESAIPIIYQYTCSSCSSSSCCSRKAKSSLSKLPSAIKLRISFSSPLLSLTPSLS------FLSNPSPNRSSSSSSLPRLCSAIQEELSLDEAS---
MATLESAIPII QY SS SSSS S +K S KLPSAIKLRISFSSPLLSL P+ + FL+NP NR R CSA+Q E+SL+EAS
Subjt: MATLESAIPIIYQYTCSSCSSSSCCSRKAKSSLSKLPSAIKLRISFSSPLLSLTPSLS------FLSNPSPNRSSSSSSLPRLCSAIQEELSLDEAS---
Query: -DQNQKRKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQKNGRSRGFAFLTMSSPDQAQAAIDKFNSQEISGRVIQVEFAKRLKKPPPPKPPGPPPGE
D NQKRKLYIFNLPWS SVVDIK+ FGQCGTVTDVEIIKQKNGRSRGFAF+TM+SPD+AQAAI KF+SQEISGRVI+VEFAKRLKKPPPPKPPGPPPGE
Subjt: -DQNQKRKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQKNGRSRGFAFLTMSSPDQAQAAIDKFNSQEISGRVIQVEFAKRLKKPPPPKPPGPPPGE
Query: TVNKLYVSNLAWKVRSSNLRDMLSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKE
TV+KLYVSNLAWK RS+NLR+ SENFNPIAARVVFDSPSG+SAGYGFVSFATREEAETALSSLEGKE
Subjt: TVNKLYVSNLAWKVRSSNLRDMLSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKE
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P19683 31 kDa ribonucleoprotein, chloroplastic | 6.5e-24 | 33.33 | Show/hide |
Query: EELSLDEASDQNQK----RKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQKN-GRSRGFAFLTMSSPDQAQAAIDKFNSQEISGRVIQV-EFAKRLK
+E+ DE ++ Q+ KL++ NLP+ + + +LF Q G V E+I ++ +SRGF F+TMS+ ++A+ A++ +N +++GR++ V + A+R +
Subjt: EELSLDEASDQNQK----RKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQKN-GRSRGFAFLTMSSPDQAQAAIDKFNSQEISGRVIQV-EFAKRLK
Query: KPPPPKPPGPPPGETVNKLYVSNLAWKVRSSNLRDMLSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKEQESGKTI
+P P P E ++YV N+ W + + L + SE+ ++ARVV+D +GRS G+GFV+ A+ E A+++L+G+ + G+TI
Subjt: KPPPPKPPGPPPGETVNKLYVSNLAWKVRSSNLRDMLSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKEQESGKTI
|
|
| P19684 33 kDa ribonucleoprotein, chloroplastic | 1.8e-21 | 31.69 | Show/hide |
Query: SAIKLRISFSSPLLSLTPSLSFLSNPSPNRSSSSSSLPRLCSAIQEELSL----DEASDQNQKR---------KLYIFNLPWSLSVVDIKKLFGQCGTVT
++ KL+ F P+ SL S FLS +S S + + +EE++L +E ++ ++R +LY+ NLP+S++ + ++F + GTV
Subjt: SAIKLRISFSSPLLSLTPSLSFLSNPSPNRSSSSSSLPRLCSAIQEELSL----DEASDQNQKR---------KLYIFNLPWSLSVVDIKKLFGQCGTVT
Query: DVEIIKQK-NGRSRGFAFLTMSSPDQAQAAIDKFNSQEISGRVIQVEFAK----RLKKPPPPKPPGPPPG--ETVNKLYVSNLAWKVRSSNLRDMLSENF
+VEI+ + RSRGFAF+TM S ++A+ AI F+ ++ GR ++V F + ++ K G ++ +KLYV+NL+W + S LRD ++
Subjt: DVEIIKQK-NGRSRGFAFLTMSSPDQAQAAIDKFNSQEISGRVIQVEFAK----RLKKPPPPKPPGPPPG--ETVNKLYVSNLAWKVRSSNLRDMLSENF
Query: NPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKEQE
++A+V++D SGRS G+GF++F++ E +AL ++ E E
Subjt: NPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKEQE
|
|
| Q08935 29 kDa ribonucleoprotein A, chloroplastic | 6.5e-24 | 35.34 | Show/hide |
Query: SLTPSLSFLSNP--SPNRSSSSSS---------------LPRLCSAIQEELSLDEASDQNQKRKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQK-N
S T SLSF S P S N S SSSS ++ + ++E + + K+++ NLP+S + +LF + G V VE+I K
Subjt: SLTPSLSFLSNP--SPNRSSSSSS---------------LPRLCSAIQEELSLDEASDQNQKRKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQK-N
Query: GRSRGFAFLTMSSPDQAQAAIDKFNSQEISGRVIQVEFAKRLKKPPPPK---------PPGPPPGETVNKLYVSNLAWKVRSSNLRDMLSENFNPIAARV
GRSRGF F+TMSS ++ +AA +FN E+ GR ++V PPP K G ++ N++YV NLAW V L + SE + A+V
Subjt: GRSRGFAFLTMSSPDQAQAAIDKFNSQEISGRVIQVEFAKRLKKPPPPK---------PPGPPPGETVNKLYVSNLAWKVRSSNLRDMLSENFNPIAARV
Query: VFDSPSGRSAGYGFVSFATREEAETALSSLEG
V+D SGRS G+GFV++++ EE A+ SL+G
Subjt: VFDSPSGRSAGYGFVSFATREEAETALSSLEG
|
|
| Q39061 RNA-binding protein CP33, chloroplastic | 2.0e-25 | 29.13 | Show/hide |
Query: SSSSSSLPRLCSAIQEELSLDEASDQNQKR---------------KLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQK-NGRSRGFAFLTMSSPDQAQ
+ +SS+ + ++++EE ++E D+ ++ +LY+ NLP++++ ++ ++FG+ GTV DV+I+ K RSRGF F+TM S ++A+
Subjt: SSSSSSLPRLCSAIQEELSLDEASDQNQKR---------------KLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQK-NGRSRGFAFLTMSSPDQAQ
Query: AAIDKFNSQEISGRVIQVEFAKRLKKPPPPKPPGPPPGE-----------------TVNKLYVSNLAWKVRSSNLRDMLSENFNPIAARVVFDSPSGRSA
A+ FNS +I GR ++V F P P GE + +K+Y NL W + S L+D + + A+V+++ +GRS
Subjt: AAIDKFNSQEISGRVIQVEFAKRLKKPPPPKPPGPPPGE-----------------TVNKLYVSNLAWKVRSSNLRDMLSENFNPIAARVVFDSPSGRSA
Query: GYGFVSFATREEAETALSSLEGKEQESGKTIGRARMLDGLYYFEEASTSHKKVQ
G+GF+SF + E ++AL+++ G E E GRA L+ E+ + S V+
Subjt: GYGFVSFATREEAETALSSLEGKEQESGKTIGRARMLDGLYYFEEASTSHKKVQ
|
|
| Q9ZUU4 RNA-binding protein CP29B, chloroplastic | 3.6e-22 | 31.15 | Show/hide |
Query: PSAIKLRISFSSPLLSLTPSLSFLSNP-------SPNRSSSSSSLPRLCS-----AIQEELSLDEASDQNQK----RKLYIFNLPWSLSVVDIKKLFGQC
P ++ +S + + L+PSLSF N + +S +S R + ++E+ D A + Q KL++ NLP+++ + +LF
Subjt: PSAIKLRISFSSPLLSLTPSLSFLSNP-------SPNRSSSSSSLPRLCS-----AIQEELSLDEASDQNQK----RKLYIFNLPWSLSVVDIKKLFGQC
Query: GTVTDVEIIKQK-NGRSRGFAFLTMSSPDQAQAAIDKFNSQEISGRVIQVEFAKRLKKPPPPKPP---------------------GPPPGETVNKLYVS
G V VE+I K GRSRGF F+TMSS + +AA +FN E+ GR ++V PPPPK G + N++YV
Subjt: GTVTDVEIIKQK-NGRSRGFAFLTMSSPDQAQAAIDKFNSQEISGRVIQVEFAKRLKKPPPPKPP---------------------GPPPGETVNKLYVS
Query: NLAWKVRSSNLRDMLSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKE
NL+W V L + SE + ARV++D SGRS G+GFV++ + +E + A+ SL+G +
Subjt: NLAWKVRSSNLRDMLSENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKE
|
|
| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G60000.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 1.0e-24 | 37.56 | Show/hide |
Query: SNPSPNRSSSSSSLPR---LCSAIQEELSLDEASDQNQ---------KRKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQKN-GRSRGFAFLTMSSP
S P P SS S R L I +L +E D KLY NLP+++ + ++ VE++ ++ G+SRGFAF+TMS+
Subjt: SNPSPNRSSSSSSLPR---LCSAIQEELSLDEASDQNQ---------KRKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQKN-GRSRGFAFLTMSSP
Query: DQAQAAIDKFNSQEISGRVIQVEFAKRLKKPPPPKPPGPPPGETVNKLYVSNLAWKVRSSNLRDMLSENFNPIAARVVFDSPSGRSAGYGFVSFATREEA
+ ID + E GR ++V FA KP P K P P ET +KL+V NL+W V S +L E + + ARVVFD +GRS GYGFV ++++ E
Subjt: DQAQAAIDKFNSQEISGRVIQVEFAKRLKKPPPPKPPGPPPGETVNKLYVSNLAWKVRSSNLRDMLSENFNPIAARVVFDSPSGRSAGYGFVSFATREEA
Query: ETALSSLEGKEQE
ETAL SL+G E E
Subjt: ETALSSLEGKEQE
|
|
| AT2G35410.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 6.2e-62 | 52.54 | Show/hide |
Query: MATLESAIPIIYQYTCSSCSSSSCCSRKAKSSLSKLPSAIKLRI-SFSSPLLSLTPSLSFLSNPSPNRSSSSSS---LPRLCSAIQEELSLDEASDQ---
MA LE+++ I+ ++ SS SS K SSL KL +A+ LRI S SP+ SL RS S +S + LCS ++E S DE + Q
Subjt: MATLESAIPIIYQYTCSSCSSSSCCSRKAKSSLSKLPSAIKLRI-SFSSPLLSLTPSLSFLSNPSPNRSSSSSS---LPRLCSAIQEELSLDEASDQ---
Query: -------NQKRKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQKNGRSRGFAFLTMSSPDQAQAAIDKFNSQEISGRVIQVEFAKRLKKPPPPKP---
N KRKL++FNLPWS+SV DI +LFGQCGTV +VEII+QK+G++RGFAF+TM+S ++AQAAIDKF++ ++SGR+I V FA+R KKP P P
Subjt: -------NQKRKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQKNGRSRGFAFLTMSSPDQAQAAIDKFNSQEISGRVIQVEFAKRLKKPPPPKP---
Query: PGPPPGETVNKLYVSNLAWKVRSSNLRDML-SENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKE
P P PG+T +KLYVSNLAWK RS++LR++ + +FNP++ARVVF P GRS+GYGFVSFATREEAE A++ L GKE
Subjt: PGPPPGETVNKLYVSNLAWKVRSSNLRDML-SENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKE
|
|
| AT3G52380.1 chloroplast RNA-binding protein 33 | 1.4e-26 | 29.13 | Show/hide |
Query: SSSSSSLPRLCSAIQEELSLDEASDQNQKR---------------KLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQK-NGRSRGFAFLTMSSPDQAQ
+ +SS+ + ++++EE ++E D+ ++ +LY+ NLP++++ ++ ++FG+ GTV DV+I+ K RSRGF F+TM S ++A+
Subjt: SSSSSSLPRLCSAIQEELSLDEASDQNQKR---------------KLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQK-NGRSRGFAFLTMSSPDQAQ
Query: AAIDKFNSQEISGRVIQVEFAKRLKKPPPPKPPGPPPGE-----------------TVNKLYVSNLAWKVRSSNLRDMLSENFNPIAARVVFDSPSGRSA
A+ FNS +I GR ++V F P P GE + +K+Y NL W + S L+D + + A+V+++ +GRS
Subjt: AAIDKFNSQEISGRVIQVEFAKRLKKPPPPKPPGPPPGE-----------------TVNKLYVSNLAWKVRSSNLRDMLSENFNPIAARVVFDSPSGRSA
Query: GYGFVSFATREEAETALSSLEGKEQESGKTIGRARMLDGLYYFEEASTSHKKVQ
G+GF+SF + E ++AL+++ G E E GRA L+ E+ + S V+
Subjt: GYGFVSFATREEAETALSSLEGKEQESGKTIGRARMLDGLYYFEEASTSHKKVQ
|
|
| AT4G09040.1 RNA-binding (RRM/RBD/RNP motifs) family protein | 3.8e-27 | 37.06 | Show/hide |
Query: PSPNRSSSSSSLPRLCSAIQEELSLDEASDQNQKRKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQKNGRSRGFAFLTMSSPDQAQAAIDKFNSQEI
P SSSSSS P + ++EE+S K +L N+PW+ + DI+ LF + G+V D+E+ K R+RG F+ M+SP++A A+ S E
Subjt: PSPNRSSSSSSLPRLCSAIQEELSLDEASDQNQKRKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQKNGRSRGFAFLTMSSPDQAQAAIDKFNSQEI
Query: SGRVIQVEFAKRLKKPPPPKPPGPPPGETVNKLYVSNLAWKVRSSNLRDML-SENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKE
GR ++V++AK KK P P T N L+V+NLA++ R+ +L++ ++ N ++ V+F RS+GYGFVSF T+++AE AL +GK+
Subjt: SGRVIQVEFAKRLKKPPPPKPPGPPPGETVNKLYVSNLAWKVRSSNLRDML-SENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKE
|
|
| AT4G09040.2 RNA-binding (RRM/RBD/RNP motifs) family protein | 3.6e-25 | 36.6 | Show/hide |
Query: SSSSSSLPRL-CSAIQE-ELSLDEASDQNQKRKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQKNGRSRGFAFLTMSSPDQAQAAIDKFNSQEISGR
S SS + RL S IQ+ L + + K +L N+PW+ + DI+ LF + G+V D+E+ K R+RG F+ M+SP++A A+ S E GR
Subjt: SSSSSSLPRL-CSAIQE-ELSLDEASDQNQKRKLYIFNLPWSLSVVDIKKLFGQCGTVTDVEIIKQKNGRSRGFAFLTMSSPDQAQAAIDKFNSQEISGR
Query: VIQVEFAKRLKKPPPPKPPGPPPGETVNKLYVSNLAWKVRSSNLRDML-SENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKE
++V++AK KK P P T N L+V+NLA++ R+ +L++ ++ N ++ V+F RS+GYGFVSF T+++AE AL +GK+
Subjt: VIQVEFAKRLKKPPPPKPPGPPPGETVNKLYVSNLAWKVRSSNLRDML-SENFNPIAARVVFDSPSGRSAGYGFVSFATREEAETALSSLEGKE
|
|
