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Sed0006558 (gene) of Chayote v1 genome

Gene IDSed0006558
OrganismSechium edule (Chayote v1)
Descriptionsmall acidic protein 1
Genome locationLG04:34737561..34738323
RNA-Seq ExpressionSed0006558
SyntenySed0006558
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593800.1 Small acidic protein 2, partial [Cucurbita argyrosperma subsp. sororia]4.2e-2395.16Show/hide
Query:  MRPTPMEFFAEMEEAGSTVAMDVDDVDPLEILGEGVISAESKLADADFFNSFQDDFDDSDIN
        MRPTPMEFFAEMEE GSTVAMDVDDVDPLEILGEGVISAE+KLADADFFNSF+DDFDDSDIN
Subjt:  MRPTPMEFFAEMEEAGSTVAMDVDDVDPLEILGEGVISAESKLADADFFNSFQDDFDDSDIN
KAG7026131.1 Small acidic protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-2395.16Show/hide
Query:  MRPTPMEFFAEMEEAGSTVAMDVDDVDPLEILGEGVISAESKLADADFFNSFQDDFDDSDIN
        MRPTPMEFFAEMEE GSTVAMDVDDVDPLEILGEGVISAE+KLADADFFNSF+DDFDDSDIN
Subjt:  MRPTPMEFFAEMEEAGSTVAMDVDDVDPLEILGEGVISAESKLADADFFNSFQDDFDDSDIN
XP_022964281.1 small acidic protein 1 [Cucurbita moschata]4.2e-2395.16Show/hide
Query:  MRPTPMEFFAEMEEAGSTVAMDVDDVDPLEILGEGVISAESKLADADFFNSFQDDFDDSDIN
        MRPTPMEFFAEMEE GSTVAMDVDDVDPLEILGEGVISAE+KLADADFFNSF+DDFDDSDIN
Subjt:  MRPTPMEFFAEMEEAGSTVAMDVDDVDPLEILGEGVISAESKLADADFFNSFQDDFDDSDIN
XP_023513491.1 small acidic protein 1 [Cucurbita pepo subsp. pepo]9.3e-2393.55Show/hide
Query:  MRPTPMEFFAEMEEAGSTVAMDVDDVDPLEILGEGVISAESKLADADFFNSFQDDFDDSDIN
        MRPTPMEFFAEMEE GSTVAMDVDDVDPLEILGEGVISAE+KLAD+DFFNSF+DDFDDSDIN
Subjt:  MRPTPMEFFAEMEEAGSTVAMDVDDVDPLEILGEGVISAESKLADADFFNSFQDDFDDSDIN
XP_038875245.1 small acidic protein 1 [Benincasa hispida]9.3e-2393.55Show/hide
Query:  MRPTPMEFFAEMEEAGSTVAMDVDDVDPLEILGEGVISAESKLADADFFNSFQDDFDDSDIN
        MRPTPMEFFAE+EE GSTVAMDVDDVDPLEILGEGVISAE+KLADADFFNSF+DDFDDSDIN
Subjt:  MRPTPMEFFAEMEEAGSTVAMDVDDVDPLEILGEGVISAESKLADADFFNSFQDDFDDSDIN
TrEMBL top hitse value%identityAlignment
A0A0A0LNK1 Uncharacterized protein1.1e-2190.32Show/hide
Query:  MRPTPMEFFAEMEEAGSTVAMDVDDVDPLEILGEGVISAESKLADADFFNSFQDDFDDSDIN
        MR +PMEFFAE+EE GSTVAMDVDDVDPLEILGEGVISAE+KLADADFFNSF+DDFDDSDIN
Subjt:  MRPTPMEFFAEMEEAGSTVAMDVDDVDPLEILGEGVISAESKLADADFFNSFQDDFDDSDIN
A0A5A7SMJ5 Small acidic protein 11.5e-2188.71Show/hide
Query:  MRPTPMEFFAEMEEAGSTVAMDVDDVDPLEILGEGVISAESKLADADFFNSFQDDFDDSDIN
        MR +PMEFFAE+EE GSTVAMDVDDVDPLEILGEGVISAE+KLADADFFNSF+DDFDDSD+N
Subjt:  MRPTPMEFFAEMEEAGSTVAMDVDDVDPLEILGEGVISAESKLADADFFNSFQDDFDDSDIN
A0A6J1CAH2 small acidic protein 16.5e-2290.32Show/hide
Query:  MRPTPMEFFAEMEEAGSTVAMDVDDVDPLEILGEGVISAESKLADADFFNSFQDDFDDSDIN
        MRPTPM+FFAEMEE GSTVAMDVDDVDPLEI  EGVISAE+KLADADFFNSF+DDFDDSDIN
Subjt:  MRPTPMEFFAEMEEAGSTVAMDVDDVDPLEILGEGVISAESKLADADFFNSFQDDFDDSDIN
A0A6J1HIH2 small acidic protein 12.0e-2395.16Show/hide
Query:  MRPTPMEFFAEMEEAGSTVAMDVDDVDPLEILGEGVISAESKLADADFFNSFQDDFDDSDIN
        MRPTPMEFFAEMEE GSTVAMDVDDVDPLEILGEGVISAE+KLADADFFNSF+DDFDDSDIN
Subjt:  MRPTPMEFFAEMEEAGSTVAMDVDDVDPLEILGEGVISAESKLADADFFNSFQDDFDDSDIN
A0A6J1KE12 small acidic protein 12.0e-2395.16Show/hide
Query:  MRPTPMEFFAEMEEAGSTVAMDVDDVDPLEILGEGVISAESKLADADFFNSFQDDFDDSDIN
        MRPTPMEFFAEMEE GSTVAMDVDDVDPLEILGEGVISAE+KLADADFFNSF+DDFDDSDIN
Subjt:  MRPTPMEFFAEMEEAGSTVAMDVDDVDPLEILGEGVISAESKLADADFFNSFQDDFDDSDIN
SwissProt top hitse value%identityAlignment
Q1ECS0 Small acidic protein 27.0e-0544.93Show/hide
Query:  MRP-TPMEFFAEMEEAGSTVAM----DVDDVDPLEILGE--GVISAESKLADADFFNSFQDDFDDSDIN
        MRP    +F  EME  G ++ M    D DD  P+++  E  G+   + K  D+DFFN F+DDFDDSDIN
Subjt:  MRP-TPMEFFAEMEEAGSTVAM----DVDDVDPLEILGE--GVISAESKLADADFFNSFQDDFDDSDIN
Q9T0H2 Small acidic protein 17.4e-1559.68Show/hide
Query:  MRPTPMEFFAEMEEAGSTVAMDVDDVDPLEILGEGVISAESKLADADFFNSFQDDFDDSDIN
        MRP  ++  +EM++AGS++AMDVDD++ +EIL EG + +++KLADADFFN F DDFDD+DIN
Subjt:  MRPTPMEFFAEMEEAGSTVAMDVDDVDPLEILGEGVISAESKLADADFFNSFQDDFDDSDIN
Arabidopsis top hitse value%identityAlignment
AT3G24280.1 small acidic protein 25.0e-0644.93Show/hide
Query:  MRP-TPMEFFAEMEEAGSTVAM----DVDDVDPLEILGE--GVISAESKLADADFFNSFQDDFDDSDIN
        MRP    +F  EME  G ++ M    D DD  P+++  E  G+   + K  D+DFFN F+DDFDDSDIN
Subjt:  MRP-TPMEFFAEMEEAGSTVAM----DVDDVDPLEILGE--GVISAESKLADADFFNSFQDDFDDSDIN
AT4G13520.1 small acidic protein 15.3e-1659.68Show/hide
Query:  MRPTPMEFFAEMEEAGSTVAMDVDDVDPLEILGEGVISAESKLADADFFNSFQDDFDDSDIN
        MRP  ++  +EM++AGS++AMDVDD++ +EIL EG + +++KLADADFFN F DDFDD+DIN
Subjt:  MRPTPMEFFAEMEEAGSTVAMDVDDVDPLEILGEGVISAESKLADADFFNSFQDDFDDSDIN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCCTACACCGATGGAGTTCTTTGCGGAGATGGAAGAGGCGGGATCCACGGTCGCGATGGACGTGGATGATGTCGATCCACTTGAGATATTAGGCGAGGGAGTCAT
CTCAGCCGAGAGCAAGCTCGCCGACGCCGATTTCTTCAACTCTTTCCAGGACGATTTTGATGACTCCGACATCAACTGA
mRNA sequenceShow/hide mRNA sequence
TTGACACCACACAAAAAAAACCCCCTTCTTTCACATTTGAATAAACCGATTTGTTAAAGAAAATTCAGCCCTAAGCGCCATTATCAATTTGTGGCTCTAACCCTTTCTCA
CTCAGACTCGAAGGCGAAGCAAGAACAATCAGCGAAAGCAGGAATGAGGCCTACACCGATGGAGTTCTTTGCGGAGATGGAAGAGGCGGGATCCACGGTCGCGATGGACG
TGGATGATGTCGATCCACTTGAGATATTAGGCGAGGGAGTCATCTCAGCCGAGAGCAAGCTCGCCGACGCCGATTTCTTCAACTCTTTCCAGGACGATTTTGATGACTCC
GACATCAACTGATATTCGGTGAAGTCAATTTACTGAATCGTATGTTTATTGCTTCTGTTCATAAAATATGATAGATGCTACTGCTACTGTGTTTTTGGAATTTTAGTGCT
TCTGTTTTTTTTTTTGGCGATAAATTGAGAATTTTACATTGTTTACTTTTGAGTACTTGATTGATTCTCCCGTTCTTTGCCTCTCAAAAGCATGGTGTATCTTTTTCATT
AGTTGCAATCAAAAGTAATGAGGTGTTTATGCA
Protein sequenceShow/hide protein sequence
MRPTPMEFFAEMEEAGSTVAMDVDDVDPLEILGEGVISAESKLADADFFNSFQDDFDDSDIN