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Sed0006569 (gene) of Chayote v1 genome

Gene IDSed0006569
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG06:46482700..46483196
RNA-Seq ExpressionSed0006569
SyntenySed0006569
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571254.1 hypothetical protein SDJN03_30169, partial [Cucurbita argyrosperma subsp. sororia]1.7e-2960.43Show/hide
Query:  MKKGGFVLVLWMMLAVSIGLGKKGYDEEEVPNNIEEIAVKV--TGGASSRPNSNSYWGWNWNWNWKEEVQKVVNKAYTYLFPPKIDFRPGKPVEDD--DA
        MKKGGFVLVL + + V +G+GK    +EE  NNIEEI  +V     ASS    NSYW         EEV+KVVN+A T LFPPKIDFRPG PVED   + 
Subjt:  MKKGGFVLVLWMMLAVSIGLGKKGYDEEEVPNNIEEIAVKV--TGGASSRPNSNSYWGWNWNWNWKEEVQKVVNKAYTYLFPPKIDFRPGKPVEDD--DA

Query:  QVNMKEAIAKSFHHTKQMVEDSANVAAQTLQQPKPHSEL
          NMKE+I KSFH TKQMVEDSAN AAQTL QP+P SEL
Subjt:  QVNMKEAIAKSFHHTKQMVEDSANVAAQTLQQPKPHSEL

KAG6571255.1 hypothetical protein SDJN03_30170, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2656.83Show/hide
Query:  MKKGGFVLVLWMMLAVSIGLGKKGYDEEEVPNNIEEIAVKV--TGGASSRPNSNSYWGWNWNWNWKEEVQKVVNKAYTYLFPPKIDFRPGKPVEDD--DA
        MKKGGFVLVL + + V +G+GK    ++E  NNIEE   +V     ASS    NSYW         EEV+KVVN+A T LFPPKIDFR G PVED   + 
Subjt:  MKKGGFVLVLWMMLAVSIGLGKKGYDEEEVPNNIEEIAVKV--TGGASSRPNSNSYWGWNWNWNWKEEVQKVVNKAYTYLFPPKIDFRPGKPVEDD--DA

Query:  QVNMKEAIAKSFHHTKQMVEDSANVAAQTLQQPKPHSEL
          NMKE+I KSFH TKQMV+DSA  AAQTL QP+P SEL
Subjt:  QVNMKEAIAKSFHHTKQMVEDSANVAAQTLQQPKPHSEL

KAG6571256.1 hypothetical protein SDJN03_30171, partial [Cucurbita argyrosperma subsp. sororia]5.2e-2656.83Show/hide
Query:  MKKGGFVLVLWMMLAVSIGLGKKGYDEEEVPNNIEEIAVKV--TGGASSRPNSNSYWGWNWNWNWKEEVQKVVNKAYTYLFPPKIDFRPGKPVEDD--DA
        MKKGGFVLVL + + V +G+GK    +EE  NNIEE   +V     ASS    NSYW         EEV+KVVN+A T LFP KIDFR G PVED   + 
Subjt:  MKKGGFVLVLWMMLAVSIGLGKKGYDEEEVPNNIEEIAVKV--TGGASSRPNSNSYWGWNWNWNWKEEVQKVVNKAYTYLFPPKIDFRPGKPVEDD--DA

Query:  QVNMKEAIAKSFHHTKQMVEDSANVAAQTLQQPKPHSEL
          NMKE+I KSFH TKQMVEDSA  +AQTL QP+P SEL
Subjt:  QVNMKEAIAKSFHHTKQMVEDSANVAAQTLQQPKPHSEL

KAG6571257.1 hypothetical protein SDJN03_30172, partial [Cucurbita argyrosperma subsp. sororia]2.7e-2758.27Show/hide
Query:  MKKGGFVLVLWMMLAVSIGLGKKGYDEEEVPNNIEEIAVKV--TGGASSRPNSNSYWGWNWNWNWKEEVQKVVNKAYTYLFPPKIDFRPGKPVEDD--DA
        MKKGGFVLVL + + V +G+GK    +EE  NNIEE   +V     ASS    NSYW         EEV+KVVN+A T LFPPKIDFR G PVED   + 
Subjt:  MKKGGFVLVLWMMLAVSIGLGKKGYDEEEVPNNIEEIAVKV--TGGASSRPNSNSYWGWNWNWNWKEEVQKVVNKAYTYLFPPKIDFRPGKPVEDD--DA

Query:  QVNMKEAIAKSFHHTKQMVEDSANVAAQTLQQPKPHSEL
          NMKE+I KSFH TKQMVEDSA  AAQTL QP+P SEL
Subjt:  QVNMKEAIAKSFHHTKQMVEDSANVAAQTLQQPKPHSEL

XP_022948557.1 uncharacterized protein LOC111452199 [Cucurbita moschata]9.7e-2557.6Show/hide
Query:  LAVSIGLGKKGYDEEEVPNNIEEIAVKV-TGGASSRPNSNSYWGWNWNWNWKEEVQKVVNKAYTYLFPPKIDFRPGKPVEDD--DAQVNMKEAIAKSFHH
        + + +G+GK    +EE PNNIEE   +V +  A+S P  NSYW         EEV+KVVN+A T LFPPKIDFRPGKPVED   +   NMKE+I KSFH 
Subjt:  LAVSIGLGKKGYDEEEVPNNIEEIAVKV-TGGASSRPNSNSYWGWNWNWNWKEEVQKVVNKAYTYLFPPKIDFRPGKPVEDD--DAQVNMKEAIAKSFHH

Query:  TKQMVEDSANVAAQTLQQPKPHSEL
        TKQMVEDSA  AAQTL +P+P SEL
Subjt:  TKQMVEDSANVAAQTLQQPKPHSEL

TrEMBL top hitse value%identityAlignment
A0A0A0L904 Uncharacterized protein5.2e-2454.23Show/hide
Query:  KKGGFVL-VLWMMLAVSIGLGKKGYDEEEVPNNIEEIAVKVTGGASSRPN-SNSYWGWNWNWNWKEEVQKVVNKAYTYLFPPKIDFRPGKPVEDD-----
        KK   VL +L ++L V +G+ K     EE  NNI           +S PN  NSYW         EEV+KVVNKAYTYLFPPKIDFRPGK VEDD     
Subjt:  KKGGFVL-VLWMMLAVSIGLGKKGYDEEEVPNNIEEIAVKVTGGASSRPN-SNSYWGWNWNWNWKEEVQKVVNKAYTYLFPPKIDFRPGKPVEDD-----

Query:  -DAQVNMKEAIAKSFHHTKQMVEDSANVAAQTLQQPKPHSEL
         +  VN+KEA+ KSF  TK+MVEDSA  AAQTLQ+P PHSEL
Subjt:  -DAQVNMKEAIAKSFHHTKQMVEDSANVAAQTLQQPKPHSEL

A0A1S3CDE0 uncharacterized protein LOC1034991556.4e-2250.75Show/hide
Query:  VLVLWMMLAVSIGLGKKGYDEEEVPNNIEEIAVKVTGGASSRPN-SNSYWGWNWNWNWKEEVQKVVNKAYTYLFPPKIDFRPGKPVEDDDA----QVNMK
        +L+L +++ V I +       +E  NN+           +S PN  NSYW         EEV+KVVNKAY+YLFPPKIDFRPGK VEDD        N+K
Subjt:  VLVLWMMLAVSIGLGKKGYDEEEVPNNIEEIAVKVTGGASSRPN-SNSYWGWNWNWNWKEEVQKVVNKAYTYLFPPKIDFRPGKPVEDDDA----QVNMK

Query:  EAIAKSFHHTKQMVEDSANVAAQTLQQPKPHSEL
        EA+ KSF  TK+MVEDSA  AAQTLQ+P PHSEL
Subjt:  EAIAKSFHHTKQMVEDSANVAAQTLQQPKPHSEL

A0A5A7VE77 Putative transmembrane protein6.4e-2250.75Show/hide
Query:  VLVLWMMLAVSIGLGKKGYDEEEVPNNIEEIAVKVTGGASSRPN-SNSYWGWNWNWNWKEEVQKVVNKAYTYLFPPKIDFRPGKPVEDDDA----QVNMK
        +L+L +++ V I +       +E  NN+           +S PN  NSYW         EEV+KVVNKAY+YLFPPKIDFRPGK VEDD        N+K
Subjt:  VLVLWMMLAVSIGLGKKGYDEEEVPNNIEEIAVKVTGGASSRPN-SNSYWGWNWNWNWKEEVQKVVNKAYTYLFPPKIDFRPGKPVEDDDA----QVNMK

Query:  EAIAKSFHHTKQMVEDSANVAAQTLQQPKPHSEL
        EA+ KSF  TK+MVEDSA  AAQTLQ+P PHSEL
Subjt:  EAIAKSFHHTKQMVEDSANVAAQTLQQPKPHSEL

A0A6J1D2A4 uncharacterized protein LOC1110169333.8e-0632.87Show/hide
Query:  FVLVLWMMLAVSIGLGKKGYDEEEVPNNIEEI---------------------AVKVTGGASSRPNSNSYWGWNWNWNWKEEVQKVVNKAYTYLFPPKID
        FVL+L   + +S G+  K  D+ +  +  EE                      A+ V    S+ P   +   W+    W      V++    YLFPPKID
Subjt:  FVLVLWMMLAVSIGLGKKGYDEEEVPNNIEEI---------------------AVKVTGGASSRPNSNSYWGWNWNWNWKEEVQKVVNKAYTYLFPPKID

Query:  FRPGKPVEDDD----AQVNMKEAIAKSFHHTKQMVEDSANVAA
        FRPGK  +D+D       N+KEA+ KSF   KQ+V+DSA  AA
Subjt:  FRPGKPVEDDD----AQVNMKEAIAKSFHHTKQMVEDSANVAA

A0A6J1G9K3 uncharacterized protein LOC1114521994.7e-2557.6Show/hide
Query:  LAVSIGLGKKGYDEEEVPNNIEEIAVKV-TGGASSRPNSNSYWGWNWNWNWKEEVQKVVNKAYTYLFPPKIDFRPGKPVEDD--DAQVNMKEAIAKSFHH
        + + +G+GK    +EE PNNIEE   +V +  A+S P  NSYW         EEV+KVVN+A T LFPPKIDFRPGKPVED   +   NMKE+I KSFH 
Subjt:  LAVSIGLGKKGYDEEEVPNNIEEIAVKV-TGGASSRPNSNSYWGWNWNWNWKEEVQKVVNKAYTYLFPPKIDFRPGKPVEDD--DAQVNMKEAIAKSFHH

Query:  TKQMVEDSANVAAQTLQQPKPHSEL
        TKQMVEDSA  AAQTL +P+P SEL
Subjt:  TKQMVEDSANVAAQTLQQPKPHSEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16850.1 unknown protein4.1e-0525.42Show/hide
Query:  VLWMMLAVSIGLGKKGYDEEEVPNNIEEIAVKVTGGASSRPNSNSYWGWNWNWNWKEEVQKVVNKAYTYLFPPKIDFRPGKPVEDDDAQVNMKEAIAKSF
        + + +  +S+ +      E  VP+  +   V +T     + +  +YW          +V++ +++  ++ FPP   F  GK      A  NMKEA  +SF
Subjt:  VLWMMLAVSIGLGKKGYDEEEVPNNIEEIAVKVTGGASSRPNSNSYWGWNWNWNWKEEVQKVVNKAYTYLFPPKIDFRPGKPVEDDDAQVNMKEAIAKSF

Query:  HHTKQMVEDSANVAAQTL
         H+K  VE++A  AA+ +
Subjt:  HHTKQMVEDSANVAAQTL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAGGTGGTTTTGTTTTGGTGTTATGGATGATGTTGGCTGTTAGTATTGGCCTTGGGAAGAAGGGTTATGATGAGGAAGAAGTACCAAATAACATAGAAGAAAT
AGCAGTTAAAGTTACAGGAGGGGCATCATCCCGGCCTAACTCTAACTCGTACTGGGGCTGGAACTGGAACTGGAACTGGAAGGAGGAGGTTCAAAAAGTGGTCAATAAAG
CCTACACCTATCTCTTTCCTCCCAAGATAGATTTCCGACCAGGAAAACCCGTGGAAGATGATGATGCACAAGTGAATATGAAGGAAGCCATCGCCAAGAGCTTCCACCAC
ACCAAACAAATGGTGGAGGATTCTGCCAACGTTGCCGCCCAAACGCTTCAACAACCCAAACCACATTCAGAACTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAAGGTGGTTTTGTTTTGGTGTTATGGATGATGTTGGCTGTTAGTATTGGCCTTGGGAAGAAGGGTTATGATGAGGAAGAAGTACCAAATAACATAGAAGAAAT
AGCAGTTAAAGTTACAGGAGGGGCATCATCCCGGCCTAACTCTAACTCGTACTGGGGCTGGAACTGGAACTGGAACTGGAAGGAGGAGGTTCAAAAAGTGGTCAATAAAG
CCTACACCTATCTCTTTCCTCCCAAGATAGATTTCCGACCAGGAAAACCCGTGGAAGATGATGATGCACAAGTGAATATGAAGGAAGCCATCGCCAAGAGCTTCCACCAC
ACCAAACAAATGGTGGAGGATTCTGCCAACGTTGCCGCCCAAACGCTTCAACAACCCAAACCACATTCAGAACTCTAA
Protein sequenceShow/hide protein sequence
MKKGGFVLVLWMMLAVSIGLGKKGYDEEEVPNNIEEIAVKVTGGASSRPNSNSYWGWNWNWNWKEEVQKVVNKAYTYLFPPKIDFRPGKPVEDDDAQVNMKEAIAKSFHH
TKQMVEDSANVAAQTLQQPKPHSEL