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Sed0006603 (gene) of Chayote v1 genome

Gene IDSed0006603
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG05:24624643..24625108
RNA-Seq ExpressionSed0006603
SyntenySed0006603
Gene Ontology termsGO:0010112 - regulation of systemic acquired resistance (biological process)
InterPro domainsIPR031425 - NPR1/NH1-interacting protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581317.1 hypothetical protein SDJN03_21319, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1645Show/hide
Query:  MEISGKRKRSENEEESEEEAAQMEKFSQIVEKFRAPYDWFSAKMCGSIRTATNDGDRGTNNK------EKLSDDVWMPSFLLRDFEEEEVIKVWKSKALR
        MEISGKRKR E++    ++  ++EKFS+IV+ FRAPY+WF AK+ GS  + TN  D   N+K       +  D VWMP FL+ DFEE+EVIK WK++AL 
Subjt:  MEISGKRKRSENEEESEEEAAQMEKFSQIVEKFRAPYDWFSAKMCGSIRTATNDGDRGTNNK------EKLSDDVWMPSFLLRDFEEEEVIKVWKSKALR

Query:  KPET-------------AVITTETIEEKENKEELDLRLCL
        K +T             A+   E  ++K++ +ELDLRL L
Subjt:  KPET-------------AVITTETIEEKENKEELDLRLCL
KAG6606917.1 hypothetical protein SDJN03_00259, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2455.64Show/hide
Query:  MEISGKRKRSENE-EESEEEAAQMEKFSQIVEKFRAPYDWFSAKMCGSIRTATNDGDRGTNNKEKLSD-----DVWMPSFLLRDFEEEEVIKVWKSKALR
        ME SGKRKR EN+   +E + A +EKF +IVEKFRAPYDWF AKM GS+    +   +    K+ + D     DVWMP FLL DFEEEEVIK WKS ALR
Subjt:  MEISGKRKRSENE-EESEEEAAQMEKFSQIVEKFRAPYDWFSAKMCGSIRTATNDGDRGTNNKEKLSD-----DVWMPSFLLRDFEEEEVIKVWKSKALR

Query:  KPETAVITTETI------EEKENKEELDLRLCL
        K ET    T         EEKEN E LDLRLCL
Subjt:  KPETAVITTETI------EEKENKEELDLRLCL
KGN58537.1 hypothetical protein Csa_002705 [Cucumis sativus]1.9e-1949.29Show/hide
Query:  MEISGKRKRSENEEESEEEAAQMEKFSQIVEKFRAPYDWFSAKMCGSIRTATNDGDRGTNNKEKLS----------DDVWMPSFLLRDFEEEEVIKVWKS
        M+ISGKRKR++N +  E+E   ++KFS+IVEKFRAPY+WF A+M      AT++G      K+K S          DDVWMP FLL+DFEEEEVIK WK+
Subjt:  MEISGKRKRSENEEESEEEAAQMEKFSQIVEKFRAPYDWFSAKMCGSIRTATNDGDRGTNNKEKLS----------DDVWMPSFLLRDFEEEEVIKVWKS

Query:  KALRKPETA--VITTETIE------EKENKEE-LDLRLCL
        +A+ +PETA      E+++      EK  KEE L+LRL L
Subjt:  KALRKPETA--VITTETIE------EKENKEE-LDLRLCL
TrEMBL top hitse value%identityAlignment
A0A0A0LCY6 Uncharacterized protein9.1e-2049.29Show/hide
Query:  MEISGKRKRSENEEESEEEAAQMEKFSQIVEKFRAPYDWFSAKMCGSIRTATNDGDRGTNNKEKLS----------DDVWMPSFLLRDFEEEEVIKVWKS
        M+ISGKRKR++N +  E+E   ++KFS+IVEKFRAPY+WF A+M      AT++G      K+K S          DDVWMP FLL+DFEEEEVIK WK+
Subjt:  MEISGKRKRSENEEESEEEAAQMEKFSQIVEKFRAPYDWFSAKMCGSIRTATNDGDRGTNNKEKLS----------DDVWMPSFLLRDFEEEEVIKVWKS

Query:  KALRKPETA--VITTETIE------EKENKEE-LDLRLCL
        +A+ +PETA      E+++      EK  KEE L+LRL L
Subjt:  KALRKPETA--VITTETIE------EKENKEE-LDLRLCL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTTCAGGGAAGAGAAAGCGAAGCGAGAATGAGGAGGAAAGCGAGGAGGAGGCGGCGCAAATGGAGAAGTTCAGCCAGATCGTGGAGAAATTCCGGGCTCCTTA
CGACTGGTTCAGCGCCAAAATGTGCGGTTCGATTCGAACTGCAACAAACGATGGCGATCGGGGAACGAACAACAAGGAGAAGTTAAGCGACGACGTTTGGATGCCCAGTT
TTCTTCTCCGAGATTTCGAGGAAGAGGAGGTTATCAAGGTATGGAAATCTAAGGCGCTGCGGAAACCCGAGACGGCGGTGATCACGACGGAGACAATCGAGGAAAAGGAG
AATAAGGAAGAGTTAGACCTTCGCCTTTGTCTTTGA
mRNA sequenceShow/hide mRNA sequence
GCATCCTCGAAAGTAAGTACAAAGTTGAGACAATTCCCCAATTCATATTACCTTTCATCTTCTTCCCCAATTCGGCAAAATCCAATCCCAAAGAAATACAATGGAGATTT
CAGGGAAGAGAAAGCGAAGCGAGAATGAGGAGGAAAGCGAGGAGGAGGCGGCGCAAATGGAGAAGTTCAGCCAGATCGTGGAGAAATTCCGGGCTCCTTACGACTGGTTC
AGCGCCAAAATGTGCGGTTCGATTCGAACTGCAACAAACGATGGCGATCGGGGAACGAACAACAAGGAGAAGTTAAGCGACGACGTTTGGATGCCCAGTTTTCTTCTCCG
AGATTTCGAGGAAGAGGAGGTTATCAAGGTATGGAAATCTAAGGCGCTGCGGAAACCCGAGACGGCGGTGATCACGACGGAGACAATCGAGGAAAAGGAGAATAAGGAAG
AGTTAGACCTTCGCCTTTGTCTTTGA
Protein sequenceShow/hide protein sequence
MEISGKRKRSENEEESEEEAAQMEKFSQIVEKFRAPYDWFSAKMCGSIRTATNDGDRGTNNKEKLSDDVWMPSFLLRDFEEEEVIKVWKSKALRKPETAVITTETIEEKE
NKEELDLRLCL