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Sed0006616 (gene) of Chayote v1 genome

Gene IDSed0006616
OrganismSechium edule (Chayote v1)
Descriptionprotein NIM1-INTERACTING 3-like
Genome locationLG03:46448432..46449071
RNA-Seq ExpressionSed0006616
SyntenySed0006616
Gene Ontology termsGO:0010112 - regulation of systemic acquired resistance (biological process)
InterPro domainsIPR031425 - NPR1/NH1-interacting protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599168.1 hypothetical protein SDJN03_08946, partial [Cucurbita argyrosperma subsp. sororia]3.5e-2055Show/hide
Query:  MEGDRKRRKLQNIE-----KEQNQEEEEDEEENMKLFFALIQNTKAMRDRNKTKQ-----DKSKGVWNPKFQPEDFMED------------FQLQDASSS
        MEG RKRRKLQNIE     +E++++E+EDEEE MKLFFALIQNTKAMRD+ K+K+     + +KGVWNPKFQPEDF+ED             +L  ASSS
Subjt:  MEGDRKRRKLQNIE-----KEQNQEEEEDEEENMKLFFALIQNTKAMRDRNKTKQ-----DKSKGVWNPKFQPEDFMED------------FQLQDASSS

Query:  NPKQSIQKEQQQE-------PEPEPEPDKEKKGLDLNLSL
          KQS QKE+ QE        E + + ++ KKGLDLNLSL
Subjt:  NPKQSIQKEQQQE-------PEPEPEPDKEKKGLDLNLSL

KGN61024.1 hypothetical protein Csa_021295 [Cucumis sativus]1.5e-1553.49Show/hide
Query:  MEGDRKRRKLQNIEKEQNQEEEEDEEENMKLFFALIQNTKAMRDRNK-----TKQDKSKGVWNPKFQPEDFMED-------------FQLQDASSSNPKQ
        ME  RKRRKLQ       +EEEE+E+E M+LF+ALIQNTKAMRD  K     T+++KSKGVWNPKFQPEDF E+              QL  ASSS  KQ
Subjt:  MEGDRKRRKLQNIEKEQNQEEEEDEEENMKLFFALIQNTKAMRDRNK-----TKQDKSKGVWNPKFQPEDFMED-------------FQLQDASSSNPKQ

Query:  SIQKEQQQEPEPEPEPDKEKKGLDLNLSL
          +K+QQ+E +   +  + KKGLDLNLSL
Subjt:  SIQKEQQQEPEPEPEPDKEKKGLDLNLSL

XP_022156378.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111023284 [Momordica charantia]1.5e-1554.92Show/hide
Query:  MEGDRKRRKLQNIEKEQNQEEEEDEEENMKLFFALIQNTKAMRDRNKTK-----QDKSKGVWNPKFQPEDFMEDFQL------QDASSSNPKQSIQKEQQ
        ME  R++RKLQ+ EKE  Q+E+E+EEE MKLFFALIQNTK++RDR K+K     QDKSKGVWNPKFQPEDF+ED         Q A+SS+ KQ  ++E++
Subjt:  MEGDRKRRKLQNIEKEQNQEEEEDEEENMKLFFALIQNTKAMRDRNKTK-----QDKSKGVWNPKFQPEDFMEDFQL------QDASSSNPKQSIQKEQQ

Query:  QEPEPEPEPDKEKKGLDLNLSL
        ++ + + E  ++   LDLNLSL
Subjt:  QEPEPEPEPDKEKKGLDLNLSL

XP_038889660.1 protein NIM1-INTERACTING 3 isoform X1 [Benincasa hispida]1.6e-1253.39Show/hide
Query:  MEGDRKRRKLQNIEKEQNQEEEEDEEENMKLFFALIQNTKAMRDRNKTK----QDKSKGVWNPKFQPEDFMED----------FQLQDASSSNPKQSIQK
        ME  RKRRKL     E+ +EE++DEE  MKL FALIQN KAMR R K+K    ++KSKGVWNPKFQPEDF+ED           QL  ASSS  K S  K
Subjt:  MEGDRKRRKLQNIEKEQNQEEEEDEEENMKLFFALIQNTKAMRDRNKTK----QDKSKGVWNPKFQPEDFMED----------FQLQDASSSNPKQSIQK

Query:  EQQQEPEPEPEPDKEKKG
        ++QQE     + DK K G
Subjt:  EQQQEPEPEPEPDKEKKG

XP_038889662.1 protein NIM1-INTERACTING 3 isoform X3 [Benincasa hispida]1.6e-1252.94Show/hide
Query:  MEGDRKRRKLQNIEKEQNQEEEEDEEENMKLFFALIQNTKAMRDRNKTK----QDKSKGVWNPKFQPEDFMED----------FQLQDASSSNPKQSIQK
        ME  RKRRKL     E+ +EE++DEE  MKL FALIQN KAMR R K+K    ++KSKGVWNPKFQPEDF+ED           QL  ASSS  K S  K
Subjt:  MEGDRKRRKLQNIEKEQNQEEEEDEEENMKLFFALIQNTKAMRDRNKTK----QDKSKGVWNPKFQPEDFMED----------FQLQDASSSNPKQSIQK

Query:  EQQQEPEPEPEPDKEKKGL
        ++QQE     + DK K  L
Subjt:  EQQQEPEPEPEPDKEKKGL

TrEMBL top hitse value%identityAlignment
A0A0A0LJ23 Uncharacterized protein7.3e-1653.49Show/hide
Query:  MEGDRKRRKLQNIEKEQNQEEEEDEEENMKLFFALIQNTKAMRDRNK-----TKQDKSKGVWNPKFQPEDFMED-------------FQLQDASSSNPKQ
        ME  RKRRKLQ       +EEEE+E+E M+LF+ALIQNTKAMRD  K     T+++KSKGVWNPKFQPEDF E+              QL  ASSS  KQ
Subjt:  MEGDRKRRKLQNIEKEQNQEEEEDEEENMKLFFALIQNTKAMRDRNK-----TKQDKSKGVWNPKFQPEDFMED-------------FQLQDASSSNPKQ

Query:  SIQKEQQQEPEPEPEPDKEKKGLDLNLSL
          +K+QQ+E +   +  + KKGLDLNLSL
Subjt:  SIQKEQQQEPEPEPEPDKEKKGLDLNLSL

A0A2I4EAN7 protein NIM1-INTERACTING 3-like5.1e-0943.51Show/hide
Query:  MEGDRKRRKLQNIE-KEQNQEEEEDEEENMKLFFALIQNTKAMRDRNKT---------------KQDKSKGVWNPKFQPEDFMEDFQLQDASSSNPKQSI
        MEG  K+RK+ N E   + +EEEEDEE+ M+ FFALI++T+ +RDR +T               K+ K+  VWNPKFQPEDF  +++     SS P  S 
Subjt:  MEGDRKRRKLQNIE-KEQNQEEEEDEEENMKLFFALIQNTKAMRDRNKT---------------KQDKSKGVWNPKFQPEDFMEDFQLQDASSSNPKQSI

Query:  ----QKEQQQEPEPEPEPDKEKKGLDLNLSL
             K +++E E E E   + KGLDLNLSL
Subjt:  ----QKEQQQEPEPEPEPDKEKKGLDLNLSL

A0A5N5GZ17 Protein NIM1-INTERACTING 15.6e-0842.74Show/hide
Query:  MEGDRKRRKLQNIEKEQNQEEEEDEEENMKLFFALIQNTKAMR-------DRNKTKQDKSK------GVWNPKFQPEDFMEDFQLQDASSSNPKQSIQKE
        MEG  K+RK+++       EEEEDEEE ++ F+ALI +T+ +R       + +K K+DK K      G WNP FQPEDF+ED ++   S  +   S + +
Subjt:  MEGDRKRRKLQNIEKEQNQEEEEDEEENMKLFFALIQNTKAMR-------DRNKTKQDKSK------GVWNPKFQPEDFMEDFQLQDASSSNPKQSIQKE

Query:  QQQEPEPEPEPDKEKKGLDLNLSL
        Q++E E + E DKE  GL+LNLSL
Subjt:  QQQEPEPEPEPDKEKKGLDLNLSL

A0A6J1DQG7 LOW QUALITY PROTEIN: uncharacterized protein LOC1110232847.3e-1654.92Show/hide
Query:  MEGDRKRRKLQNIEKEQNQEEEEDEEENMKLFFALIQNTKAMRDRNKTK-----QDKSKGVWNPKFQPEDFMEDFQL------QDASSSNPKQSIQKEQQ
        ME  R++RKLQ+ EKE  Q+E+E+EEE MKLFFALIQNTK++RDR K+K     QDKSKGVWNPKFQPEDF+ED         Q A+SS+ KQ  ++E++
Subjt:  MEGDRKRRKLQNIEKEQNQEEEEDEEENMKLFFALIQNTKAMRDRNKTK-----QDKSKGVWNPKFQPEDFMEDFQL------QDASSSNPKQSIQKEQQ

Query:  QEPEPEPEPDKEKKGLDLNLSL
        ++ + + E  ++   LDLNLSL
Subjt:  QEPEPEPEPDKEKKGLDLNLSL

V7BGK0 Uncharacterized protein1.1e-0842.4Show/hide
Query:  MEGDRKRRKLQNIEKEQNQEEEEDEEENMKLFFALIQNTKAMRDR--NKTKQDKSKGVWNPKFQPEDFMEDFQL------QDASSSNPKQSIQK---EQQ
        MEG R++RK+   E+E+  EEEE EEE M+ FFALI++TK  RDR   + +++K+KGVW P F+PEDFM+D +L      +DA   + K + ++   +  
Subjt:  MEGDRKRRKLQNIEKEQNQEEEEDEEENMKLFFALIQNTKAMRDR--NKTKQDKSKGVWNPKFQPEDFMEDFQL------QDASSSNPKQSIQK---EQQ

Query:  QEPEPEPE---PDKEKKGLDLNLSL
         +P P+P+    +K    LDL LSL
Subjt:  QEPEPEPE---PDKEKKGLDLNLSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGAGATAGAAAAAGAAGAAAACTTCAAAACATTGAAAAAGAACAAAACCAAGAAGAAGAAGAAGATGAAGAGGAAAATATGAAGCTGTTCTTTGCTCTGATTCA
AAACACCAAAGCCATGCGAGACAGAAACAAGACAAAACAAGACAAATCAAAAGGGGTTTGGAATCCAAAGTTCCAACCAGAAGATTTCATGGAAGATTTTCAATTACAAG
ATGCTTCATCTTCAAACCCAAAACAGAGCATTCAAAAGGAACAACAACAAGAACCAGAACCAGAACCAGAACCAGATAAAGAAAAAAAGGGTCTTGATCTTAATCTCTCT
CTTTGA
mRNA sequenceShow/hide mRNA sequence
CCCGTCTAAAACATTTCAAAGTGAACCATTTCTCTCTCTTGTAATTCATTTCCCACCATTGGAGCCATGGAAGGAGATAGAAAAAGAAGAAAACTTCAAAACATTGAAAA
AGAACAAAACCAAGAAGAAGAAGAAGATGAAGAGGAAAATATGAAGCTGTTCTTTGCTCTGATTCAAAACACCAAAGCCATGCGAGACAGAAACAAGACAAAACAAGACA
AATCAAAAGGGGTTTGGAATCCAAAGTTCCAACCAGAAGATTTCATGGAAGATTTTCAATTACAAGATGCTTCATCTTCAAACCCAAAACAGAGCATTCAAAAGGAACAA
CAACAAGAACCAGAACCAGAACCAGAACCAGATAAAGAAAAAAAGGGTCTTGATCTTAATCTCTCTCTTTGATTCTATTTTTAATGTTTTTTTTTATATGTAATTGACAG
TGTTTGATGATGGGTAGCTTTTGGTTTTTCTTGTTTCTATTTTAAAAGCTCTCATCTTATCCATTTTTATATTTTTAAGACTGCTCTGTTTCTATTGATCCTTTGAAGAA
GTTTTCTTTGGTCATTTTGAGTGGTAAATTTTGAGAAAAGTGGAAAACCCCATCATTGATTTCAAGGGGAAAGTTGAAGATTAGGGTAAA
Protein sequenceShow/hide protein sequence
MEGDRKRRKLQNIEKEQNQEEEEDEEENMKLFFALIQNTKAMRDRNKTKQDKSKGVWNPKFQPEDFMEDFQLQDASSSNPKQSIQKEQQQEPEPEPEPDKEKKGLDLNLS
L