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Sed0006635 (gene) of Chayote v1 genome

Gene IDSed0006635
OrganismSechium edule (Chayote v1)
DescriptionCACTA en-spm transposon protein
Genome locationLG07:15827533..15828262
RNA-Seq ExpressionSed0006635
SyntenySed0006635
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045540.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]7.0e-0635.96Show/hide
Query:  MCNHWELLDWLEKSRKAKESRVGLKYHDRVGSRSFLNIQ-EMGE------------------MIALQKSPIVEGSQPLTKAKICVKVLGRLSDRINGMSY
        +CNH+    + E+SR  K +R    Y+   GS+SFL  Q E+ E                  M+ LQ  P  EGSQPL++ +IC +VLGR  D   G+ +
Subjt:  MCNHWELLDWLEKSRKAKESRVGLKYHDRVGSRSFLNIQ-EMGE------------------MIALQKSPIVEGSQPLTKAKICVKVLGRLSDRINGMSY

Query:  LPKTKRSKSASSSS
         PK K  ++ S+SS
Subjt:  LPKTKRSKSASSSS

KAA0046652.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]5.9e-0535.34Show/hide
Query:  MCNHWELLDWLEKSRKAKESRVGLKYHDRVGSRSFLNIQ-EMGE------------------MIALQKSPIVEGSQPLTKAKICVKVLGRLSDRINGMSY
        +C+H+    + E+SR  K +R    Y+   GS+SFL  Q E+ E                  M+ LQ  P  EGSQPL++ +IC +VLGR      G+ +
Subjt:  MCNHWELLDWLEKSRKAKESRVGLKYHDRVGSRSFLNIQ-EMGE------------------MIALQKSPIVEGSQPLTKAKICVKVLGRLSDRINGMSY

Query:  LPKTKRSKSASSSSGS
         PK K  ++AS+SS S
Subjt:  LPKTKRSKSASSSSGS

KAA0051394.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]1.7e-0429.34Show/hide
Query:  MCNHWELLDWLEKSRKAKESRVGLKYHDRVGSRSFLNIQ--------EMGEMIALQKSPIVEGSQPLTKAKICVKVLGRLSDRINGMSY--LPKTKRSKS
        +C+H+    + E+SR  K +R    Y+   GS+SFL  Q        E+ +++ LQ  P  +GSQPL + +IC +VLGR S    G+ +   PK +R+ S
Subjt:  MCNHWELLDWLEKSRKAKESRVGLKYHDRVGSRSFLNIQ--------EMGEMIALQKSPIVEGSQPLTKAKICVKVLGRLSDRINGMSY--LPKTKRSKS

Query:  ASSSSGSKGNRDRDFDDTVVALKEDFEQQIVALKKAQEEKDKQTMEKMDSMQTMMAGMYKKFNQGHP
        ASSSS S     +   +    L E  E+      + Q+   +    +++ +Q ++   + +  QG P
Subjt:  ASSSSGSKGNRDRDFDDTVVALKEDFEQQIVALKKAQEEKDKQTMEKMDSMQTMMAGMYKKFNQGHP

TYK22243.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa]4.8e-0737.14Show/hide
Query:  MCNHWELLDWLEKSRKAKESRVGLKYHDRVGSRSFLNIQ--------EMGEMIALQKSPIVEGSQPLTKAKICVKVLGRLSDRINGMSYLPKTKRSKSAS
        +CNH+    + E+SR  K +R    Y+   GS+SFL  Q        E+ +++ LQ  P  +GSQPL + +IC +VLGR S  + G+ + PK K  ++ S
Subjt:  MCNHWELLDWLEKSRKAKESRVGLKYHDRVGSRSFLNIQ--------EMGEMIALQKSPIVEGSQPLTKAKICVKVLGRLSDRINGMSYLPKTKRSKSAS

Query:  SSSGS
        +SS S
Subjt:  SSSGS

XP_034677791.1 uncharacterized protein LOC117908288 [Vitis riparia]2.0e-0833.08Show/hide
Query:  MCNHWELLDWLEKSRKAKESRVGLKYHDRVGSRSFL-NIQEMGEMIALQKSPIVEGSQPLTKAKICVKVLGRLSDRINGMSYLPKTKRSKSASSSSGSKG
        +C+ +    +  +S    E+R+ L +  R GSRSF+ +++E+ +M+ LQK P++EG Q L +A+ICV+VLG  S  I G+ + P   R  S+SS S  K 
Subjt:  MCNHWELLDWLEKSRKAKESRVGLKYHDRVGSRSFL-NIQEMGEMIALQKSPIVEGSQPLTKAKICVKVLGRLSDRINGMSYLPKTKRSKSASSSSGSKG

Query:  NRDRDFDDTVVALKEDFEQQIVALKKAQEE
        +R+ + ++ + A +E  + Q   ++  Q +
Subjt:  NRDRDFDDTVVALKEDFEQQIVALKKAQEE

TrEMBL top hitse value%identityAlignment
A0A5A7TQV6 CACTA en-spm transposon protein3.4e-0635.96Show/hide
Query:  MCNHWELLDWLEKSRKAKESRVGLKYHDRVGSRSFLNIQ-EMGE------------------MIALQKSPIVEGSQPLTKAKICVKVLGRLSDRINGMSY
        +CNH+    + E+SR  K +R    Y+   GS+SFL  Q E+ E                  M+ LQ  P  EGSQPL++ +IC +VLGR  D   G+ +
Subjt:  MCNHWELLDWLEKSRKAKESRVGLKYHDRVGSRSFLNIQ-EMGE------------------MIALQKSPIVEGSQPLTKAKICVKVLGRLSDRINGMSY

Query:  LPKTKRSKSASSSS
         PK K  ++ S+SS
Subjt:  LPKTKRSKSASSSS

A0A5A7TT95 CACTA en-spm transposon protein2.9e-0535.34Show/hide
Query:  MCNHWELLDWLEKSRKAKESRVGLKYHDRVGSRSFLNIQ-EMGE------------------MIALQKSPIVEGSQPLTKAKICVKVLGRLSDRINGMSY
        +C+H+    + E+SR  K +R    Y+   GS+SFL  Q E+ E                  M+ LQ  P  EGSQPL++ +IC +VLGR      G+ +
Subjt:  MCNHWELLDWLEKSRKAKESRVGLKYHDRVGSRSFLNIQ-EMGE------------------MIALQKSPIVEGSQPLTKAKICVKVLGRLSDRINGMSY

Query:  LPKTKRSKSASSSSGS
         PK K  ++AS+SS S
Subjt:  LPKTKRSKSASSSSGS

A0A5A7U7V3 CACTA en-spm transposon protein8.3e-0529.34Show/hide
Query:  MCNHWELLDWLEKSRKAKESRVGLKYHDRVGSRSFLNIQ--------EMGEMIALQKSPIVEGSQPLTKAKICVKVLGRLSDRINGMSY--LPKTKRSKS
        +C+H+    + E+SR  K +R    Y+   GS+SFL  Q        E+ +++ LQ  P  +GSQPL + +IC +VLGR S    G+ +   PK +R+ S
Subjt:  MCNHWELLDWLEKSRKAKESRVGLKYHDRVGSRSFLNIQ--------EMGEMIALQKSPIVEGSQPLTKAKICVKVLGRLSDRINGMSY--LPKTKRSKS

Query:  ASSSSGSKGNRDRDFDDTVVALKEDFEQQIVALKKAQEEKDKQTMEKMDSMQTMMAGMYKKFNQGHP
        ASSSS S     +   +    L E  E+      + Q+   +    +++ +Q ++   + +  QG P
Subjt:  ASSSSGSKGNRDRDFDDTVVALKEDFEQQIVALKKAQEEKDKQTMEKMDSMQTMMAGMYKKFNQGHP

A0A5A7ULK1 CACTA en-spm transposon protein1.4e-0432.06Show/hide
Query:  MCNHWELLDWLEKSRKAKESRVGLKYHDRVGSRSFLNIQ-EMGE---------------------------------MIALQKSPIVEGSQPLTKAKICV
        +C+H+    + E+SR  K +R    Y+   GS+SFL  Q E+ E                                 M+ LQ  P  EGSQPL++ +IC 
Subjt:  MCNHWELLDWLEKSRKAKESRVGLKYHDRVGSRSFLNIQ-EMGE---------------------------------MIALQKSPIVEGSQPLTKAKICV

Query:  KVLGRLSDRINGMSYLPKTKRSKSASSSSGS
        +VLGR  D   G+ + PK K  ++AS+SS S
Subjt:  KVLGRLSDRINGMSYLPKTKRSKSASSSSGS

A0A5D3DFC9 CACTA en-spm transposon protein2.3e-0737.14Show/hide
Query:  MCNHWELLDWLEKSRKAKESRVGLKYHDRVGSRSFLNIQ--------EMGEMIALQKSPIVEGSQPLTKAKICVKVLGRLSDRINGMSYLPKTKRSKSAS
        +CNH+    + E+SR  K +R    Y+   GS+SFL  Q        E+ +++ LQ  P  +GSQPL + +IC +VLGR S  + G+ + PK K  ++ S
Subjt:  MCNHWELLDWLEKSRKAKESRVGLKYHDRVGSRSFLNIQ--------EMGEMIALQKSPIVEGSQPLTKAKICVKVLGRLSDRINGMSYLPKTKRSKSAS

Query:  SSSGS
        +SS S
Subjt:  SSSGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCAACCACTGGGAATTGCTTGACTGGTTGGAAAAGAGTAGGAAAGCGAAAGAGAGTCGAGTAGGGCTTAAATACCACGACCGAGTAGGCAGTAGGTCCTTCTTGAA
CATTCAAGAAATGGGTGAAATGATAGCCCTTCAAAAATCACCAATTGTTGAAGGGTCCCAACCCTTAACTAAGGCTAAAATTTGTGTGAAGGTGTTAGGGCGTCTTTCTG
ATAGGATTAATGGTATGAGTTATCTACCAAAGACAAAGCGCTCAAAAAGTGCCTCCTCTTCATCTGGTAGTAAGGGAAATCGTGATCGTGACTTCGATGATACTGTGGTG
GCACTAAAAGAAGATTTTGAACAACAAATAGTTGCATTAAAAAAAGCACAAGAGGAGAAAGATAAACAAACAATGGAGAAGATGGACTCTATGCAAACCATGATGGCGGG
GATGTACAAGAAGTTCAATCAAGGCCACCCATCGAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGCAACCACTGGGAATTGCTTGACTGGTTGGAAAAGAGTAGGAAAGCGAAAGAGAGTCGAGTAGGGCTTAAATACCACGACCGAGTAGGCAGTAGGTCCTTCTTGAA
CATTCAAGAAATGGGTGAAATGATAGCCCTTCAAAAATCACCAATTGTTGAAGGGTCCCAACCCTTAACTAAGGCTAAAATTTGTGTGAAGGTGTTAGGGCGTCTTTCTG
ATAGGATTAATGGTATGAGTTATCTACCAAAGACAAAGCGCTCAAAAAGTGCCTCCTCTTCATCTGGTAGTAAGGGAAATCGTGATCGTGACTTCGATGATACTGTGGTG
GCACTAAAAGAAGATTTTGAACAACAAATAGTTGCATTAAAAAAAGCACAAGAGGAGAAAGATAAACAAACAATGGAGAAGATGGACTCTATGCAAACCATGATGGCGGG
GATGTACAAGAAGTTCAATCAAGGCCACCCATCGAGCTAA
Protein sequenceShow/hide protein sequence
MCNHWELLDWLEKSRKAKESRVGLKYHDRVGSRSFLNIQEMGEMIALQKSPIVEGSQPLTKAKICVKVLGRLSDRINGMSYLPKTKRSKSASSSSGSKGNRDRDFDDTVV
ALKEDFEQQIVALKKAQEEKDKQTMEKMDSMQTMMAGMYKKFNQGHPSS