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Sed0006639 (gene) of Chayote v1 genome

Gene IDSed0006639
OrganismSechium edule (Chayote v1)
Descriptionglycine-rich cell wall structural protein 2-like
Genome locationLG07:9161068..9161888
RNA-Seq ExpressionSed0006639
SyntenySed0006639
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146895.1 glycine-rich cell wall structural protein 2 [Cucumis sativus]5.9e-3861.62Show/hide
Query:  MKKPYTFYHSFLFFLLLIFITHFSAVNGGVSGRKLLNFPDMSWGPNYGSG-------NGRYGSAHGPNWDYNWGWGSSPGSGWGYGSGSSRSRTGFGKGY
        MK+P  F+ S LFFLL + +T  S V+ G + RKLLNFPDMSWG   G G        G YGS HGPNWDYNWGWGSSPGSGWG+GSGS RS TGFGKGY
Subjt:  MKKPYTFYHSFLFFLLLIFITHFSAVNGGVSGRKLLNFPDMSWGPNYGSG-------NGRYGSAHGPNWDYNWGWGSSPGSGWGYGSGSSRSRTGFGKGY

Query:  GYGFGSGSGSGSGSGYGFGSGGGGSHGGGFGFGRGYENFGGSGNGGRYGGSGDSGPNGSGDSGPDGSSDGKYHLPITTSDKNRHG
        GYGF  GSGSGSGSGYG+GSG GG+HGGG+G G GY N GG G+GG YGG        SGD         +Y  P+TT DKNR G
Subjt:  GYGFGSGSGSGSGSGYGFGSGGGGSHGGGFGFGRGYENFGGSGNGGRYGGSGDSGPNGSGDSGPDGSSDGKYHLPITTSDKNRHG

XP_016901488.1 PREDICTED: glycine-rich cell wall structural protein 2 [Cucumis melo]7.7e-3862.5Show/hide
Query:  MKKPYTFYHSFLFFLLLIFITHFSAVNGGVSGRKLLNFPDMSWG-PNYGSG-----NGRYGSAHGPNWDYNWGWGSSPGSGWGYGSGSSRSRTGFGKGYG
        MK+P  F+ S LFFLL + +T  S V+G  + RKLLNFPDMSWG PN G G      G YGS H PNWDYNWGWGSSPGSGWG+GSGS RS TGFGKGYG
Subjt:  MKKPYTFYHSFLFFLLLIFITHFSAVNGGVSGRKLLNFPDMSWG-PNYGSG-----NGRYGSAHGPNWDYNWGWGSSPGSGWGYGSGSSRSRTGFGKGYG

Query:  YGFGSGSGSGSGSGYGFGSGGGGSHGGGFGFGRGYENFGGSGNGGRYGGSGDSGPNGSGDSGPDGSSDGKYHLPITTSDKNRHG
        YGF  GSGSGSGSGYG+GSG GG+HGGG+G G GY N GG G GG YGG        SGD         +Y  P TT DKNR G
Subjt:  YGFGSGSGSGSGSGYGFGSGGGGSHGGGFGFGRGYENFGGSGNGGRYGGSGDSGPNGSGDSGPDGSSDGKYHLPITTSDKNRHG

XP_022922583.1 glycine-rich cell wall structural protein 2-like [Cucurbita moschata]2.0e-3866.67Show/hide
Query:  MKKPYTFYHSFLFFLLLIFITHFSAVNGGVSGRKLLNFPDMSWGPNYGSGN--GRYGSAHGPNWDYNWGWGSSPGSGWGYGSGSSRSRTGFGKGYGYGFG
        MKKP  F+ S LFF LL FIT  SAV+    GRKLLN PDM WG   G GN  G YGSAHGPNWDYNWGWGSSPGSGWGYGSGS RS TGFGKGYGYGF 
Subjt:  MKKPYTFYHSFLFFLLLIFITHFSAVNGGVSGRKLLNFPDMSWGPNYGSGN--GRYGSAHGPNWDYNWGWGSSPGSGWGYGSGSSRSRTGFGKGYGYGFG

Query:  SGSGSGSGSGYGFGSGGGGSHGGGFGFGRGYENFGGSGNGGRYGGSGDSGPNGSGDSGPDGSSDGKYHLPITTSDKNRHG
         GSGSGSGSGYG+GSGGGG+HGGG+G G GY N G SG+GG YGGS   G           SS G+Y     T DK+RHG
Subjt:  SGSGSGSGSGYGFGSGGGGSHGGGFGFGRGYENFGGSGNGGRYGGSGDSGPNGSGDSGPDGSSDGKYHLPITTSDKNRHG

XP_022984407.1 glycine-rich cell wall structural protein 2-like [Cucurbita maxima]1.2e-3865Show/hide
Query:  MKKPYTFYHSFLFFLLLIFITHFSAVNGGVSGRKLLNFPDMSWGPNYGSGN--GRYGSAHGPNWDYNWGWGSSPGSGWGYGSGSSRSRTGFGKGYGYGFG
        MKKP  F+ S LFFLL      F  V+  V GRKLLN PDM WG   G GN  G YGSAHGPNWDYNWGWGSSPGSGWGYGSGS RS TGFGKGYGYGF 
Subjt:  MKKPYTFYHSFLFFLLLIFITHFSAVNGGVSGRKLLNFPDMSWGPNYGSGN--GRYGSAHGPNWDYNWGWGSSPGSGWGYGSGSSRSRTGFGKGYGYGFG

Query:  SGSGSGSGSGYGFGSGGGGSHGGGFGFGRGYENFGGSGNGGRYGGSGDSGPNGSGDSGPDGSSDGKYHLPITTSDKNRHG
         GSGSGSGSGYG+GSGGGG+HGGG+G G GY N G SG+GG YGGS   G           SS G+Y     T DK+RHG
Subjt:  SGSGSGSGSGYGFGSGGGGSHGGGFGFGRGYENFGGSGNGGRYGGSGDSGPNGSGDSGPDGSSDGKYHLPITTSDKNRHG

XP_038899364.1 glycine-rich cell wall structural protein 2-like [Benincasa hispida]4.1e-3962.98Show/hide
Query:  MKKPYTFYHSFLFFLLLIFITHFSAVNGGVSGRKLLNFPDMSWG-PNYGSGNGR----YGSAHGPNWDYNWGWGSSPGSGWGYGSGSSRSRTGFGKGYGY
        MKKP TF+   LFFLL +     S V+G  + RKLLNFPDMSWG PN G G G     YGSAHGPNWDYNWGWGSSPGSGWGYGSGS RS TGFGKGYGY
Subjt:  MKKPYTFYHSFLFFLLLIFITHFSAVNGGVSGRKLLNFPDMSWG-PNYGSGNGR----YGSAHGPNWDYNWGWGSSPGSGWGYGSGSSRSRTGFGKGYGY

Query:  GFGSGSGSGSGSGYGFGSGGGGSHGGGFGFGRGYENFGGSGNGGRYGGSGDSGPNGSGDSGPDGSSDGKYHLPITTSDKNR
        G+  G GSGSGSG+G+GSG GG+HGGG+G G GY N GG+G+GG YG     GPNG            +Y  P TT DKNR
Subjt:  GFGSGSGSGSGSGYGFGSGGGGSHGGGFGFGRGYENFGGSGNGGRYGGSGDSGPNGSGDSGPDGSSDGKYHLPITTSDKNR

TrEMBL top hitse value%identityAlignment
A0A0A0KXP2 Uncharacterized protein2.9e-3861.62Show/hide
Query:  MKKPYTFYHSFLFFLLLIFITHFSAVNGGVSGRKLLNFPDMSWGPNYGSG-------NGRYGSAHGPNWDYNWGWGSSPGSGWGYGSGSSRSRTGFGKGY
        MK+P  F+ S LFFLL + +T  S V+ G + RKLLNFPDMSWG   G G        G YGS HGPNWDYNWGWGSSPGSGWG+GSGS RS TGFGKGY
Subjt:  MKKPYTFYHSFLFFLLLIFITHFSAVNGGVSGRKLLNFPDMSWGPNYGSG-------NGRYGSAHGPNWDYNWGWGSSPGSGWGYGSGSSRSRTGFGKGY

Query:  GYGFGSGSGSGSGSGYGFGSGGGGSHGGGFGFGRGYENFGGSGNGGRYGGSGDSGPNGSGDSGPDGSSDGKYHLPITTSDKNRHG
        GYGF  GSGSGSGSGYG+GSG GG+HGGG+G G GY N GG G+GG YGG        SGD         +Y  P+TT DKNR G
Subjt:  GYGFGSGSGSGSGSGYGFGSGGGGSHGGGFGFGRGYENFGGSGNGGRYGGSGDSGPNGSGDSGPDGSSDGKYHLPITTSDKNRHG

A0A1S4DZT0 glycine-rich cell wall structural protein 23.8e-3862.5Show/hide
Query:  MKKPYTFYHSFLFFLLLIFITHFSAVNGGVSGRKLLNFPDMSWG-PNYGSG-----NGRYGSAHGPNWDYNWGWGSSPGSGWGYGSGSSRSRTGFGKGYG
        MK+P  F+ S LFFLL + +T  S V+G  + RKLLNFPDMSWG PN G G      G YGS H PNWDYNWGWGSSPGSGWG+GSGS RS TGFGKGYG
Subjt:  MKKPYTFYHSFLFFLLLIFITHFSAVNGGVSGRKLLNFPDMSWG-PNYGSG-----NGRYGSAHGPNWDYNWGWGSSPGSGWGYGSGSSRSRTGFGKGYG

Query:  YGFGSGSGSGSGSGYGFGSGGGGSHGGGFGFGRGYENFGGSGNGGRYGGSGDSGPNGSGDSGPDGSSDGKYHLPITTSDKNRHG
        YGF  GSGSGSGSGYG+GSG GG+HGGG+G G GY N GG G GG YGG        SGD         +Y  P TT DKNR G
Subjt:  YGFGSGSGSGSGSGYGFGSGGGGSHGGGFGFGRGYENFGGSGNGGRYGGSGDSGPNGSGDSGPDGSSDGKYHLPITTSDKNRHG

A0A5A7TRC6 Glycine-rich cell wall structural protein 23.8e-3862.5Show/hide
Query:  MKKPYTFYHSFLFFLLLIFITHFSAVNGGVSGRKLLNFPDMSWG-PNYGSG-----NGRYGSAHGPNWDYNWGWGSSPGSGWGYGSGSSRSRTGFGKGYG
        MK+P  F+ S LFFLL + +T  S V+G  + RKLLNFPDMSWG PN G G      G YGS H PNWDYNWGWGSSPGSGWG+GSGS RS TGFGKGYG
Subjt:  MKKPYTFYHSFLFFLLLIFITHFSAVNGGVSGRKLLNFPDMSWG-PNYGSG-----NGRYGSAHGPNWDYNWGWGSSPGSGWGYGSGSSRSRTGFGKGYG

Query:  YGFGSGSGSGSGSGYGFGSGGGGSHGGGFGFGRGYENFGGSGNGGRYGGSGDSGPNGSGDSGPDGSSDGKYHLPITTSDKNRHG
        YGF  GSGSGSGSGYG+GSG GG+HGGG+G G GY N GG G GG YGG        SGD         +Y  P TT DKNR G
Subjt:  YGFGSGSGSGSGSGYGFGSGGGGSHGGGFGFGRGYENFGGSGNGGRYGGSGDSGPNGSGDSGPDGSSDGKYHLPITTSDKNRHG

A0A6J1E737 glycine-rich cell wall structural protein 2-like9.9e-3966.67Show/hide
Query:  MKKPYTFYHSFLFFLLLIFITHFSAVNGGVSGRKLLNFPDMSWGPNYGSGN--GRYGSAHGPNWDYNWGWGSSPGSGWGYGSGSSRSRTGFGKGYGYGFG
        MKKP  F+ S LFF LL FIT  SAV+    GRKLLN PDM WG   G GN  G YGSAHGPNWDYNWGWGSSPGSGWGYGSGS RS TGFGKGYGYGF 
Subjt:  MKKPYTFYHSFLFFLLLIFITHFSAVNGGVSGRKLLNFPDMSWGPNYGSGN--GRYGSAHGPNWDYNWGWGSSPGSGWGYGSGSSRSRTGFGKGYGYGFG

Query:  SGSGSGSGSGYGFGSGGGGSHGGGFGFGRGYENFGGSGNGGRYGGSGDSGPNGSGDSGPDGSSDGKYHLPITTSDKNRHG
         GSGSGSGSGYG+GSGGGG+HGGG+G G GY N G SG+GG YGGS   G           SS G+Y     T DK+RHG
Subjt:  SGSGSGSGSGYGFGSGGGGSHGGGFGFGRGYENFGGSGNGGRYGGSGDSGPNGSGDSGPDGSSDGKYHLPITTSDKNRHG

A0A6J1J236 glycine-rich cell wall structural protein 2-like5.8e-3965Show/hide
Query:  MKKPYTFYHSFLFFLLLIFITHFSAVNGGVSGRKLLNFPDMSWGPNYGSGN--GRYGSAHGPNWDYNWGWGSSPGSGWGYGSGSSRSRTGFGKGYGYGFG
        MKKP  F+ S LFFLL      F  V+  V GRKLLN PDM WG   G GN  G YGSAHGPNWDYNWGWGSSPGSGWGYGSGS RS TGFGKGYGYGF 
Subjt:  MKKPYTFYHSFLFFLLLIFITHFSAVNGGVSGRKLLNFPDMSWGPNYGSGN--GRYGSAHGPNWDYNWGWGSSPGSGWGYGSGSSRSRTGFGKGYGYGFG

Query:  SGSGSGSGSGYGFGSGGGGSHGGGFGFGRGYENFGGSGNGGRYGGSGDSGPNGSGDSGPDGSSDGKYHLPITTSDKNRHG
         GSGSGSGSGYG+GSGGGG+HGGG+G G GY N G SG+GG YGGS   G           SS G+Y     T DK+RHG
Subjt:  SGSGSGSGSGYGFGSGGGGSHGGGFGFGRGYENFGGSGNGGRYGGSGDSGPNGSGDSGPDGSSDGKYHLPITTSDKNRHG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G61660.1 glycine-rich protein1.9e-1860.95Show/hide
Query:  GSGNGRYGSAHGPNWDYNWGWGSSPGSGWGYGSGSSRSRTGFGKGYGYGFGSGSGSGSGSGYGFGSGGGGSHGGGFGFGRGYENFGGSGNGGRYGGSGDS
        G+  G  GS  GPNW+YNWGWGS+PGSGWGYG+GS RS TG+G+G GYG+  GSGSGSG+GYG+GSGGGG+ GGG+G+G G    GG G GG + G   +
Subjt:  GSGNGRYGSAHGPNWDYNWGWGSSPGSGWGYGSGSSRSRTGFGKGYGYGFGSGSGSGSGSGYGFGSGGGGSHGGGFGFGRGYENFGGSGNGGRYGGSGDS

Query:  GPNGS
          +GS
Subjt:  GPNGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAAACCATATACATTTTATCACTCATTTCTCTTCTTTCTTCTCCTAATTTTCATCACTCATTTCTCCGCCGTCAACGGCGGCGTTAGTGGCCGGAAACTGCTGAA
CTTTCCCGACATGTCTTGGGGACCCAATTATGGATCTGGAAATGGGCGCTATGGCTCTGCCCATGGTCCTAATTGGGACTACAATTGGGGATGGGGATCTAGTCCGGGGA
GTGGCTGGGGTTATGGTTCCGGTTCAAGCCGATCCCGAACCGGGTTTGGAAAAGGTTATGGTTATGGGTTCGGATCGGGCTCGGGCTCGGGCTCGGGCTCGGGATATGGA
TTTGGAAGTGGGGGTGGTGGGTCTCATGGTGGTGGATTTGGGTTTGGAAGAGGCTATGAAAATTTCGGTGGTAGTGGCAATGGTGGCCGATATGGTGGTTCGGGTGACAG
CGGACCCAATGGTTCGGGTGACAGCGGACCCGATGGTTCGAGTGACGGCAAGTATCACTTACCAATCACTACGAGTGACAAAAATAGGCACGGGTAA
mRNA sequenceShow/hide mRNA sequence
ACACCAACAAATTTCTCTCTTTCTTTTTATCTCTCTCAAAACCCCAATTAAAATATGAAAAAACCATATACATTTTATCACTCATTTCTCTTCTTTCTTCTCCTAATTTT
CATCACTCATTTCTCCGCCGTCAACGGCGGCGTTAGTGGCCGGAAACTGCTGAACTTTCCCGACATGTCTTGGGGACCCAATTATGGATCTGGAAATGGGCGCTATGGCT
CTGCCCATGGTCCTAATTGGGACTACAATTGGGGATGGGGATCTAGTCCGGGGAGTGGCTGGGGTTATGGTTCCGGTTCAAGCCGATCCCGAACCGGGTTTGGAAAAGGT
TATGGTTATGGGTTCGGATCGGGCTCGGGCTCGGGCTCGGGCTCGGGATATGGATTTGGAAGTGGGGGTGGTGGGTCTCATGGTGGTGGATTTGGGTTTGGAAGAGGCTA
TGAAAATTTCGGTGGTAGTGGCAATGGTGGCCGATATGGTGGTTCGGGTGACAGCGGACCCAATGGTTCGGGTGACAGCGGACCCGATGGTTCGAGTGACGGCAAGTATC
ACTTACCAATCACTACGAGTGACAAAAATAGGCACGGGTAATATATAAGCAATGTTGATTGATATATATGTCATAGACTATATAGTTATATTAAAATGTGAGGATATAAT
GTAAAGGTTAGCTCTAGCTAGCTCTAATATATTTCTATGATATGGTTTGTAAGCTTACTTAAAGTTTATCCATATATGCGAGTCTCAGCCTTGTAATGATGTTAGTATAT
GTTTACTATATAGTTTTTTTTTTTAAATGAGACTAAAAGTTATATTTTCCG
Protein sequenceShow/hide protein sequence
MKKPYTFYHSFLFFLLLIFITHFSAVNGGVSGRKLLNFPDMSWGPNYGSGNGRYGSAHGPNWDYNWGWGSSPGSGWGYGSGSSRSRTGFGKGYGYGFGSGSGSGSGSGYG
FGSGGGGSHGGGFGFGRGYENFGGSGNGGRYGGSGDSGPNGSGDSGPDGSSDGKYHLPITTSDKNRHG