; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0006672 (gene) of Chayote v1 genome

Gene IDSed0006672
OrganismSechium edule (Chayote v1)
Descriptionprotein PLASTID REDOX INSENSITIVE 2, chloroplastic-like
Genome locationLG06:40854860..40855914
RNA-Seq ExpressionSed0006672
SyntenySed0006672
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0010468 - regulation of gene expression (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR039349 - Protein PLASTID REDOX INSENSITIVE 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601379.1 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]8.6e-5872.41Show/hide
Query:  FHLPPSSPLFPFPFPKPTTVPNPIFFHPSNPSLHHKPIILNPPFLTPHQPF--------ICRAAAAEYKFPDPIPEFAAAETEKFRAHLLKKLSKKDIYG
        FHL PS     F   KPT    P FF  SNPS   +   L+P    P QP         ICR  AAEYKFPDPIPEFA AETEKFRAHLL KLSKKDIYG
Subjt:  FHLPPSSPLFPFPFPKPTTVPNPIFFHPSNPSLHHKPIILNPPFLTPHQPF--------ICRAAAAEYKFPDPIPEFAAAETEKFRAHLLKKLSKKDIYG

Query:  DSVQEVVGICTEIFNTFMHTEYGGPGTLMVVPFIDMSDTVNERGLPGGPQAARAAVKWAQDHVDKDWNHWTGDD
        DSVQEVVG+CTEIFNTFMHTEYGGPGTL+V+PFIDMSDT+NERGLPGGPQAARAAVKWAQ+HVDKDWN WTGDD
Subjt:  DSVQEVVGICTEIFNTFMHTEYGGPGTLMVVPFIDMSDTVNERGLPGGPQAARAAVKWAQDHVDKDWNHWTGDD

XP_004135224.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic [Cucumis sativus]8.6e-5872.78Show/hide
Query:  FHLPPSSPLFPFPFPKPTTVPNPIFFHPSNPSLHHKPIILNPPFLTPHQPF---ICRAAAAEYKFPDPIPEFAAAETEKFRAHLLKKLSKKDIYGDSVQE
        F+L PS  LF FPF KP+  P+   F  +NPS    P+ L+P    P   F   IC   AAEYKFPDPIPEFA AETEKFRAHLL+KLSK+DIYGDS+Q+
Subjt:  FHLPPSSPLFPFPFPKPTTVPNPIFFHPSNPSLHHKPIILNPPFLTPHQPF---ICRAAAAEYKFPDPIPEFAAAETEKFRAHLLKKLSKKDIYGDSVQE

Query:  VVGICTEIFNTFMHTEYGGPGTLMVVPFIDMSDTVNERGLPGGPQAARAAVKWAQDHVDKDWNHWTGDD
        VVGICTEIFNTFMHTEYGGPGTL+V+PFIDMSD +NERGLPGGPQAARAAVKWAQDHVDKDWN WTGDD
Subjt:  VVGICTEIFNTFMHTEYGGPGTLMVVPFIDMSDTVNERGLPGGPQAARAAVKWAQDHVDKDWNHWTGDD

XP_022151247.1 protein PLASTID REDOX INSENSITIVE 2-like [Momordica charantia]1.7e-5872.67Show/hide
Query:  MASLFHLPPSSPLFPFPFPKPTTVPNPIFFHPSNPSLHHKPI--ILNPPFLTPHQPFICRAAAAEYKFPDPIPEFAAAETEKFRAHLLKKLSKKDIYGDS
        +A   HLPPS         KP+ +P   F +PS P LH   +   LN P+  P +  ICR  AAEYKFPDPIPEFA AETEKFRAHLL KLSKKD+YGDS
Subjt:  MASLFHLPPSSPLFPFPFPKPTTVPNPIFFHPSNPSLHHKPI--ILNPPFLTPHQPFICRAAAAEYKFPDPIPEFAAAETEKFRAHLLKKLSKKDIYGDS

Query:  VQEVVGICTEIFNTFMHTEYGGPGTLMVVPFIDMSDTVNERGLPGGPQAARAAVKWAQDHVDKDWNHWTGDD
        V EVVGICTEIFNTFMHTEYGGPGTL+VVPFIDMSDT+NERGLPGGPQAARAAVKWAQDHVDKDWN WTGDD
Subjt:  VQEVVGICTEIFNTFMHTEYGGPGTLMVVPFIDMSDTVNERGLPGGPQAARAAVKWAQDHVDKDWNHWTGDD

XP_022956596.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Cucurbita moschata]3.3e-5773.41Show/hide
Query:  FHLPPSSPLFPFPFPKPTTVPNPIFFHPSNPSLHHKPIILNPPFLTPHQPF-------ICRAAAAEYKFPDPIPEFAAAETEKFRAHLLKKLSKKDIYGD
        FHL P  PLF    P   T P P FF  SNPS   +   L+P    P QP        ICR  AAEYKFPDPIPEFA AETEKFRAHLL KLSKKDIYGD
Subjt:  FHLPPSSPLFPFPFPKPTTVPNPIFFHPSNPSLHHKPIILNPPFLTPHQPF-------ICRAAAAEYKFPDPIPEFAAAETEKFRAHLLKKLSKKDIYGD

Query:  SVQEVVGICTEIFNTFMHTEYGGPGTLMVVPFIDMSDTVNERGLPGGPQAARAAVKWAQDHVDKDWNHWTGDD
        SVQEVVG+CTEIFNTFMHTEYGGPGTL+V+PFIDMSDT+NERGLPGGPQAARAAVKWAQ+HVDKDWN WTGDD
Subjt:  SVQEVVGICTEIFNTFMHTEYGGPGTLMVVPFIDMSDTVNERGLPGGPQAARAAVKWAQDHVDKDWNHWTGDD

XP_038891304.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Benincasa hispida]2.8e-6174.58Show/hide
Query:  ASLFHLPPSSPLFPFPFPKPTTVPNPIFFHPSNPSLHHKPIILNPPFLTPHQP--------FICRAAAAEYKFPDPIPEFAAAETEKFRAHLLKKLSKKD
        +S FHL PSS    FP  KP  +P   F +PS P LHHK + L    L P QP         ICR  AAEYKFPDPIPEFA AETEKFRAHLL+KLSKKD
Subjt:  ASLFHLPPSSPLFPFPFPKPTTVPNPIFFHPSNPSLHHKPIILNPPFLTPHQP--------FICRAAAAEYKFPDPIPEFAAAETEKFRAHLLKKLSKKD

Query:  IYGDSVQEVVGICTEIFNTFMHTEYGGPGTLMVVPFIDMSDTVNERGLPGGPQAARAAVKWAQDHVDKDWNHWTGDD
        IYGDSV EVVGICTEIFNTFMHTEYGGPGTL+V+PFIDMSDT+NERGLPGGPQAARAAVKWAQDHVDKDWNHWTGDD
Subjt:  IYGDSVQEVVGICTEIFNTFMHTEYGGPGTLMVVPFIDMSDTVNERGLPGGPQAARAAVKWAQDHVDKDWNHWTGDD

TrEMBL top hitse value%identityAlignment
A0A0A0KTS5 Uncharacterized protein4.1e-5872.78Show/hide
Query:  FHLPPSSPLFPFPFPKPTTVPNPIFFHPSNPSLHHKPIILNPPFLTPHQPF---ICRAAAAEYKFPDPIPEFAAAETEKFRAHLLKKLSKKDIYGDSVQE
        F+L PS  LF FPF KP+  P+   F  +NPS    P+ L+P    P   F   IC   AAEYKFPDPIPEFA AETEKFRAHLL+KLSK+DIYGDS+Q+
Subjt:  FHLPPSSPLFPFPFPKPTTVPNPIFFHPSNPSLHHKPIILNPPFLTPHQPF---ICRAAAAEYKFPDPIPEFAAAETEKFRAHLLKKLSKKDIYGDSVQE

Query:  VVGICTEIFNTFMHTEYGGPGTLMVVPFIDMSDTVNERGLPGGPQAARAAVKWAQDHVDKDWNHWTGDD
        VVGICTEIFNTFMHTEYGGPGTL+V+PFIDMSD +NERGLPGGPQAARAAVKWAQDHVDKDWN WTGDD
Subjt:  VVGICTEIFNTFMHTEYGGPGTLMVVPFIDMSDTVNERGLPGGPQAARAAVKWAQDHVDKDWNHWTGDD

A0A1S3BEL5 uncharacterized protein LOC1034890376.0e-5772.02Show/hide
Query:  FHLPPSSPLFPFPFPKPTTVPNPIFFHPSNPSLHHK--PIILNPPFLTPHQPFICRAAAAEYKFPDPIPEFAAAETEKFRAHLLKKLSKKDIYGDSVQEV
        F+L P  PLF F F KP+    P+ F  +NPS   +  P +  P   +     IC   AAEYKFPDPIPEFA AETEKFRAHLL+KLSKKDIYGDS+Q+V
Subjt:  FHLPPSSPLFPFPFPKPTTVPNPIFFHPSNPSLHHK--PIILNPPFLTPHQPFICRAAAAEYKFPDPIPEFAAAETEKFRAHLLKKLSKKDIYGDSVQEV

Query:  VGICTEIFNTFMHTEYGGPGTLMVVPFIDMSDTVNERGLPGGPQAARAAVKWAQDHVDKDWNHWTGDD
        VGICTEIFNTFMHTEYGGPGTL+V+PFIDMSDT+NERGLPGGPQAARAAVKWAQDHVDKDWN WTGDD
Subjt:  VGICTEIFNTFMHTEYGGPGTLMVVPFIDMSDTVNERGLPGGPQAARAAVKWAQDHVDKDWNHWTGDD

A0A6J1DCY7 protein PLASTID REDOX INSENSITIVE 2-like8.3e-5972.67Show/hide
Query:  MASLFHLPPSSPLFPFPFPKPTTVPNPIFFHPSNPSLHHKPI--ILNPPFLTPHQPFICRAAAAEYKFPDPIPEFAAAETEKFRAHLLKKLSKKDIYGDS
        +A   HLPPS         KP+ +P   F +PS P LH   +   LN P+  P +  ICR  AAEYKFPDPIPEFA AETEKFRAHLL KLSKKD+YGDS
Subjt:  MASLFHLPPSSPLFPFPFPKPTTVPNPIFFHPSNPSLHHKPI--ILNPPFLTPHQPFICRAAAAEYKFPDPIPEFAAAETEKFRAHLLKKLSKKDIYGDS

Query:  VQEVVGICTEIFNTFMHTEYGGPGTLMVVPFIDMSDTVNERGLPGGPQAARAAVKWAQDHVDKDWNHWTGDD
        V EVVGICTEIFNTFMHTEYGGPGTL+VVPFIDMSDT+NERGLPGGPQAARAAVKWAQDHVDKDWN WTGDD
Subjt:  VQEVVGICTEIFNTFMHTEYGGPGTLMVVPFIDMSDTVNERGLPGGPQAARAAVKWAQDHVDKDWNHWTGDD

A0A6J1GWZ9 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like1.6e-5773.41Show/hide
Query:  FHLPPSSPLFPFPFPKPTTVPNPIFFHPSNPSLHHKPIILNPPFLTPHQPF-------ICRAAAAEYKFPDPIPEFAAAETEKFRAHLLKKLSKKDIYGD
        FHL P  PLF    P   T P P FF  SNPS   +   L+P    P QP        ICR  AAEYKFPDPIPEFA AETEKFRAHLL KLSKKDIYGD
Subjt:  FHLPPSSPLFPFPFPKPTTVPNPIFFHPSNPSLHHKPIILNPPFLTPHQPF-------ICRAAAAEYKFPDPIPEFAAAETEKFRAHLLKKLSKKDIYGD

Query:  SVQEVVGICTEIFNTFMHTEYGGPGTLMVVPFIDMSDTVNERGLPGGPQAARAAVKWAQDHVDKDWNHWTGDD
        SVQEVVG+CTEIFNTFMHTEYGGPGTL+V+PFIDMSDT+NERGLPGGPQAARAAVKWAQ+HVDKDWN WTGDD
Subjt:  SVQEVVGICTEIFNTFMHTEYGGPGTLMVVPFIDMSDTVNERGLPGGPQAARAAVKWAQDHVDKDWNHWTGDD

A0A6J1KAW7 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like1.6e-5773.84Show/hide
Query:  FHLPPSSPLFPFPFPKPTTVPNPIFFHPSNPSLHHKPIILNPPFLTPHQPF------ICRAAAAEYKFPDPIPEFAAAETEKFRAHLLKKLSKKDIYGDS
        FHL P  PLF    P   T P P FF  SNPS   +   L+P    P QP       ICR  AAEYKFPDPIPEFA AETEKFRAHLL KLSKKDIYGDS
Subjt:  FHLPPSSPLFPFPFPKPTTVPNPIFFHPSNPSLHHKPIILNPPFLTPHQPF------ICRAAAAEYKFPDPIPEFAAAETEKFRAHLLKKLSKKDIYGDS

Query:  VQEVVGICTEIFNTFMHTEYGGPGTLMVVPFIDMSDTVNERGLPGGPQAARAAVKWAQDHVDKDWNHWTGDD
        VQEVVG+CTEIFNTFMHTEYGGPGTL+V+PFIDMSDT+NERGLPGGPQAARAAVKWAQ+HVDKDWN WTGDD
Subjt:  VQEVVGICTEIFNTFMHTEYGGPGTLMVVPFIDMSDTVNERGLPGGPQAARAAVKWAQDHVDKDWNHWTGDD

SwissProt top hitse value%identityAlignment
B6UFC7 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic1.9e-3657.02Show/hide
Query:  FICR----AAAAEYKFPDPIPEFAAAETEKFRAHLLKKL--SKKDIYGDSVQEVVGICTEIFNTFMHTEYGGPGTLMVVPFIDMSDTVNERGLPGGPQAA
        F+CR    A   +YKFPDPIPEFA  ET KFR H+  +L   K+D +GD V+E+V +CTEI  TF+  +Y GPGTL+V PF+DM   + ERGLPG PQAA
Subjt:  FICR----AAAAEYKFPDPIPEFAAAETEKFRAHLLKKL--SKKDIYGDSVQEVVGICTEIFNTFMHTEYGGPGTLMVVPFIDMSDTVNERGLPGGPQAA

Query:  RAAVKWAQDHVDKDWNHWTGD
        RAA+ WA+ +VDKDW  WTG+
Subjt:  RAAVKWAQDHVDKDWNHWTGD

Q6H612 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic1.9e-3656.2Show/hide
Query:  FICR----AAAAEYKFPDPIPEFAAAETEKFRAHLLKKLSKK--DIYGDSVQEVVGICTEIFNTFMHTEYGGPGTLMVVPFIDMSDTVNERGLPGGPQAA
        F+CR    AA  +YKFPDPIPEFAA ET KF+ H++ +L +K  D +G+ V+E+V +CTEI  TF+  +Y GPGTL+V PF+DM   + ERGLPG PQAA
Subjt:  FICR----AAAAEYKFPDPIPEFAAAETEKFRAHLLKKLSKK--DIYGDSVQEVVGICTEIFNTFMHTEYGGPGTLMVVPFIDMSDTVNERGLPGGPQAA

Query:  RAAVKWAQDHVDKDWNHWTGD
        RAA+ WA+ ++DKDW  WTG+
Subjt:  RAAVKWAQDHVDKDWNHWTGD

Q9XIK0 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic8.1e-5176.72Show/hide
Query:  FICRAAAAEYKFPDPIPEFAAAETEKFRAHLLKKLSKKDIYGDSVQEVVGICTEIFNTFMHTEYGGPGTLMVVPFIDMSDTVNERGLPGGPQAARAAVKW
        F+CR  AAEYKFPDPIPEFA AETEKFR H+L KLSK+D++ DSV E+VG+CTEIF TF+ +EYGGPGTL+V+PFIDM+DT+NER LPGGPQAARAA+KW
Subjt:  FICRAAAAEYKFPDPIPEFAAAETEKFRAHLLKKLSKKDIYGDSVQEVVGICTEIFNTFMHTEYGGPGTLMVVPFIDMSDTVNERGLPGGPQAARAAVKW

Query:  AQDHVDKDWNHWTGDD
        AQDHVDKDW  WTG D
Subjt:  AQDHVDKDWNHWTGDD

Arabidopsis top hitse value%identityAlignment
AT1G10522.1 unknown protein5.7e-5276.72Show/hide
Query:  FICRAAAAEYKFPDPIPEFAAAETEKFRAHLLKKLSKKDIYGDSVQEVVGICTEIFNTFMHTEYGGPGTLMVVPFIDMSDTVNERGLPGGPQAARAAVKW
        F+CR  AAEYKFPDPIPEFA AETEKFR H+L KLSK+D++ DSV E+VG+CTEIF TF+ +EYGGPGTL+V+PFIDM+DT+NER LPGGPQAARAA+KW
Subjt:  FICRAAAAEYKFPDPIPEFAAAETEKFRAHLLKKLSKKDIYGDSVQEVVGICTEIFNTFMHTEYGGPGTLMVVPFIDMSDTVNERGLPGGPQAARAAVKW

Query:  AQDHVDKDWNHWTGDD
        AQDHVDKDW  WTG D
Subjt:  AQDHVDKDWNHWTGDD

AT1G10522.2 unknown protein5.7e-5276.72Show/hide
Query:  FICRAAAAEYKFPDPIPEFAAAETEKFRAHLLKKLSKKDIYGDSVQEVVGICTEIFNTFMHTEYGGPGTLMVVPFIDMSDTVNERGLPGGPQAARAAVKW
        F+CR  AAEYKFPDPIPEFA AETEKFR H+L KLSK+D++ DSV E+VG+CTEIF TF+ +EYGGPGTL+V+PFIDM+DT+NER LPGGPQAARAA+KW
Subjt:  FICRAAAAEYKFPDPIPEFAAAETEKFRAHLLKKLSKKDIYGDSVQEVVGICTEIFNTFMHTEYGGPGTLMVVPFIDMSDTVNERGLPGGPQAARAAVKW

Query:  AQDHVDKDWNHWTGDD
        AQDHVDKDW  WTG D
Subjt:  AQDHVDKDWNHWTGDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCACTTTTCCATCTTCCCCCTTCTTCTCCTCTCTTCCCCTTCCCCTTCCCCAAACCCACAACAGTTCCTAATCCCATCTTCTTCCACCCTTCAAACCCTTCTCT
CCATCACAAACCCATCATTCTCAACCCTCCATTTCTAACTCCTCACCAGCCCTTCATTTGCAGAGCCGCCGCCGCCGAGTACAAATTCCCAGACCCAATTCCCGAATTCG
CCGCCGCCGAAACCGAGAAGTTCAGAGCTCATCTCCTGAAAAAGCTATCTAAGAAAGACATATATGGGGATTCTGTTCAAGAGGTCGTTGGAATATGTACCGAGATATTC
AATACCTTTATGCATACCGAGTATGGTGGCCCTGGGACTCTGATGGTCGTCCCTTTCATTGATATGTCTGATACCGTCAATGAGCGTGGCTTGCCTGGCGGACCTCAAGC
TGCTCGTGCTGCTGTCAAATGGGCTCAAGACCATGTTGATAAGGACTGGAACCATTGGACCGGTGATGATGATGGTACCTGA
mRNA sequenceShow/hide mRNA sequence
TGAGGTTGTATCCACGTAAGACGTGGGTATACCCCAAAACATAAACCCTCGAGCTGCTTCTTCCCCCATTCGCAGCAGATAAACATGGCATCACTTTTCCATCTTCCCCC
TTCTTCTCCTCTCTTCCCCTTCCCCTTCCCCAAACCCACAACAGTTCCTAATCCCATCTTCTTCCACCCTTCAAACCCTTCTCTCCATCACAAACCCATCATTCTCAACC
CTCCATTTCTAACTCCTCACCAGCCCTTCATTTGCAGAGCCGCCGCCGCCGAGTACAAATTCCCAGACCCAATTCCCGAATTCGCCGCCGCCGAAACCGAGAAGTTCAGA
GCTCATCTCCTGAAAAAGCTATCTAAGAAAGACATATATGGGGATTCTGTTCAAGAGGTCGTTGGAATATGTACCGAGATATTCAATACCTTTATGCATACCGAGTATGG
TGGCCCTGGGACTCTGATGGTCGTCCCTTTCATTGATATGTCTGATACCGTCAATGAGCGTGGCTTGCCTGGCGGACCTCAAGCTGCTCGTGCTGCTGTCAAATGGGCTC
AAGACCATGTTGATAAGGACTGGAACCATTGGACCGGTGATGATGATGGTACCTGAGATTAACTGTTTCTCTGCATCATTCACATTTTGTTAAAGATAAACACAGTCTTT
AGTGTACTAGATCTTGTTTATGAGCTTAGATAGATGCCTGCTTTCTTTTTATTATCATACCACCTCTAGGATGGGAAGAATAGAACTAAGTAACACAAATAAACTTTTTC
TATTTTTAACTTGATTGTATTTCTATGCGGCTTGACCACTCTTACAAATATATAAATATTAGATGCCTTTCTATCAGGAATCTAAGATTTGAATTTTGGATGTGTTTGTT
TGAAGAGAGGTCATAAAAACTCATTTTGTAACAGCTCTTACAGTCCTAAACTTTAGAGTTTCTTTGTCTAAACTGAACATTAAAGTATTTCTATTGAACCAGTG
Protein sequenceShow/hide protein sequence
MASLFHLPPSSPLFPFPFPKPTTVPNPIFFHPSNPSLHHKPIILNPPFLTPHQPFICRAAAAEYKFPDPIPEFAAAETEKFRAHLLKKLSKKDIYGDSVQEVVGICTEIF
NTFMHTEYGGPGTLMVVPFIDMSDTVNERGLPGGPQAARAAVKWAQDHVDKDWNHWTGDDDGT