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Sed0006677 (gene) of Chayote v1 genome

Gene IDSed0006677
OrganismSechium edule (Chayote v1)
DescriptionProtein Ycf2-like
Genome locationLG14:17233249..17234209
RNA-Seq ExpressionSed0006677
SyntenySed0006677
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035754.1 protein Ycf2-like [Cucumis melo var. makuwa]2.2e-1646.99Show/hide
Query:  GFIYDLLAWAYEVIPALSAAPTYYVMRTGNGLPRILNWDSDSQPEWRELLTEVFEAPSFEVHNLIATDADMEMAYFAPFLGEE
        GFI+ +LAWAYEVIP LS  P ++  R  N +PRI+NW +D+QP+W++L  +VF++ + EV +++AT  ++ M +FAPF+  E
Subjt:  GFIYDLLAWAYEVIPALSAAPTYYVMRTGNGLPRILNWDSDSQPEWRELLTEVFEAPSFEVHNLIATDADMEMAYFAPFLGEE

KAA0047596.1 protein Ycf2-like [Cucumis melo var. makuwa]1.7e-1648.24Show/hide
Query:  MSGFIYDLLAWAYEVIPALSAAPTYYVMRTGNGLPRILNWDSDSQPEWRELLTEVFEAPSFEVHNLIATDADMEMAYFAPFLGEE
        M GFI+ +LAWAYEVIP LS  P ++V R  N +PRI+N  +D+QP+W++L  +VF++P+ EV  ++AT  ++ M +FAPF+  E
Subjt:  MSGFIYDLLAWAYEVIPALSAAPTYYVMRTGNGLPRILNWDSDSQPEWRELLTEVFEAPSFEVHNLIATDADMEMAYFAPFLGEE

KAA0050200.1 protein Ycf2-like [Cucumis melo var. makuwa]2.6e-1748.19Show/hide
Query:  GFIYDLLAWAYEVIPALSAAPTYYVMRTGNGLPRILNWDSDSQPEWRELLTEVFEAPSFEVHNLIATDADMEMAYFAPFLGEE
        GFI+ +LAWAYEVIP LS  P ++  R  N +PRI+NW +D+QP+W++L  +VF++P+ EV +++AT  ++ M +FAPF+  E
Subjt:  GFIYDLLAWAYEVIPALSAAPTYYVMRTGNGLPRILNWDSDSQPEWRELLTEVFEAPSFEVHNLIATDADMEMAYFAPFLGEE

TYK09852.1 protein Ycf2-like [Cucumis melo var. makuwa]1.7e-1649.37Show/hide
Query:  GFIYDLLAWAYEVIPALSAAPTYYVMRTGNGLPRILNWDSDSQPEWRELLTEVFEAPSFEVHNLIATDADMEMAYFAPF
        GFI+ +LAWAYEVIP LS  P ++  R  N +PRI+NW +D+QP+W++L  +VF++P+ EV  ++AT  ++ M +FAPF
Subjt:  GFIYDLLAWAYEVIPALSAAPTYYVMRTGNGLPRILNWDSDSQPEWRELLTEVFEAPSFEVHNLIATDADMEMAYFAPF

TYK23192.1 protein Ycf2-like [Cucumis melo var. makuwa]1.7e-1649.37Show/hide
Query:  GFIYDLLAWAYEVIPALSAAPTYYVMRTGNGLPRILNWDSDSQPEWRELLTEVFEAPSFEVHNLIATDADMEMAYFAPF
        GFI+ +LAWAYEVIP LS  P ++  R  N +PRI+NW +D+QP+W++L  +VF++P+ EV  ++AT  ++ M +FAPF
Subjt:  GFIYDLLAWAYEVIPALSAAPTYYVMRTGNGLPRILNWDSDSQPEWRELLTEVFEAPSFEVHNLIATDADMEMAYFAPF

TrEMBL top hitse value%identityAlignment
A0A5A7SWP9 Protein Ycf2-like1.1e-1646.99Show/hide
Query:  GFIYDLLAWAYEVIPALSAAPTYYVMRTGNGLPRILNWDSDSQPEWRELLTEVFEAPSFEVHNLIATDADMEMAYFAPFLGEE
        GFI+ +LAWAYEVIP LS  P ++  R  N +PRI+NW +D+QP+W++L  +VF++ + EV +++AT  ++ M +FAPF+  E
Subjt:  GFIYDLLAWAYEVIPALSAAPTYYVMRTGNGLPRILNWDSDSQPEWRELLTEVFEAPSFEVHNLIATDADMEMAYFAPFLGEE

A0A5A7U047 Protein Ycf2-like8.2e-1748.24Show/hide
Query:  MSGFIYDLLAWAYEVIPALSAAPTYYVMRTGNGLPRILNWDSDSQPEWRELLTEVFEAPSFEVHNLIATDADMEMAYFAPFLGEE
        M GFI+ +LAWAYEVIP LS  P ++V R  N +PRI+N  +D+QP+W++L  +VF++P+ EV  ++AT  ++ M +FAPF+  E
Subjt:  MSGFIYDLLAWAYEVIPALSAAPTYYVMRTGNGLPRILNWDSDSQPEWRELLTEVFEAPSFEVHNLIATDADMEMAYFAPFLGEE

A0A5A7U4J7 Protein Ycf2-like1.3e-1748.19Show/hide
Query:  GFIYDLLAWAYEVIPALSAAPTYYVMRTGNGLPRILNWDSDSQPEWRELLTEVFEAPSFEVHNLIATDADMEMAYFAPFLGEE
        GFI+ +LAWAYEVIP LS  P ++  R  N +PRI+NW +D+QP+W++L  +VF++P+ EV +++AT  ++ M +FAPF+  E
Subjt:  GFIYDLLAWAYEVIPALSAAPTYYVMRTGNGLPRILNWDSDSQPEWRELLTEVFEAPSFEVHNLIATDADMEMAYFAPFLGEE

A0A5D3CEX9 Protein Ycf2-like8.2e-1749.37Show/hide
Query:  GFIYDLLAWAYEVIPALSAAPTYYVMRTGNGLPRILNWDSDSQPEWRELLTEVFEAPSFEVHNLIATDADMEMAYFAPF
        GFI+ +LAWAYEVIP LS  P ++  R  N +PRI+NW +D+QP+W++L  +VF++P+ EV  ++AT  ++ M +FAPF
Subjt:  GFIYDLLAWAYEVIPALSAAPTYYVMRTGNGLPRILNWDSDSQPEWRELLTEVFEAPSFEVHNLIATDADMEMAYFAPF

A0A5D3DHZ2 Protein Ycf2-like8.2e-1749.37Show/hide
Query:  GFIYDLLAWAYEVIPALSAAPTYYVMRTGNGLPRILNWDSDSQPEWRELLTEVFEAPSFEVHNLIATDADMEMAYFAPF
        GFI+ +LAWAYEVIP LS  P ++  R  N +PRI+NW +D+QP+W++L  +VF++P+ EV  ++AT  ++ M +FAPF
Subjt:  GFIYDLLAWAYEVIPALSAAPTYYVMRTGNGLPRILNWDSDSQPEWRELLTEVFEAPSFEVHNLIATDADMEMAYFAPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGGATTCATTTATGACCTACTGGCTTGGGCGTACGAAGTTATACCAGCATTGAGTGCAGCACCAACATATTATGTTATGCGCACTGGTAATGGTCTACCCCGAAT
ATTAAATTGGGACTCGGATTCCCAACCTGAATGGCGTGAGTTGCTGACAGAGGTTTTCGAGGCCCCTTCGTTTGAGGTGCATAACCTTATAGCCACAGATGCAGATATGG
AGATGGCATATTTTGCACCATTTTTAGGCGAGGAGTTAGCGGCCTGTGAGCGAAACAGTCCACCAGGTGGGAGCCGACATGCAATATACACCTTTCCCCATGCATCTACC
TCGTACACCCCATTTACTAAAGAGTTGGTCGTGCGGGTAGACACATTTGAGAGGCAGCAGGCGGCAATGCAACACCAAACATCTGCAATGACAGCCACCTTCAAAACTGT
TGATAAAAGAAGTGACAAAGGTGTGAACAACCACAACATCCACAAGAAAGTCCCCCCAAAGGGTCGAGACGACGACGATGACAACACGGGTGGACAATCTGGTGGTGGGG
GCCCACCCATCATAAGGGCTAGGCTTATGCAAACCCAATCCTCCATGCCTAGTGAGCAAACCGATGGGGGAAATATCGTGGTAGAGGGTGGACAAACACTGGTTTGCGCC
AACCTCCCCGGTTTTATTTTCATAGTTTGGAGACATCTATCCCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGGATTCATTTATGACCTACTGGCTTGGGCGTACGAAGTTATACCAGCATTGAGTGCAGCACCAACATATTATGTTATGCGCACTGGTAATGGTCTACCCCGAAT
ATTAAATTGGGACTCGGATTCCCAACCTGAATGGCGTGAGTTGCTGACAGAGGTTTTCGAGGCCCCTTCGTTTGAGGTGCATAACCTTATAGCCACAGATGCAGATATGG
AGATGGCATATTTTGCACCATTTTTAGGCGAGGAGTTAGCGGCCTGTGAGCGAAACAGTCCACCAGGTGGGAGCCGACATGCAATATACACCTTTCCCCATGCATCTACC
TCGTACACCCCATTTACTAAAGAGTTGGTCGTGCGGGTAGACACATTTGAGAGGCAGCAGGCGGCAATGCAACACCAAACATCTGCAATGACAGCCACCTTCAAAACTGT
TGATAAAAGAAGTGACAAAGGTGTGAACAACCACAACATCCACAAGAAAGTCCCCCCAAAGGGTCGAGACGACGACGATGACAACACGGGTGGACAATCTGGTGGTGGGG
GCCCACCCATCATAAGGGCTAGGCTTATGCAAACCCAATCCTCCATGCCTAGTGAGCAAACCGATGGGGGAAATATCGTGGTAGAGGGTGGACAAACACTGGTTTGCGCC
AACCTCCCCGGTTTTATTTTCATAGTTTGGAGACATCTATCCCTCTAA
Protein sequenceShow/hide protein sequence
MSGFIYDLLAWAYEVIPALSAAPTYYVMRTGNGLPRILNWDSDSQPEWRELLTEVFEAPSFEVHNLIATDADMEMAYFAPFLGEELAACERNSPPGGSRHAIYTFPHAST
SYTPFTKELVVRVDTFERQQAAMQHQTSAMTATFKTVDKRSDKGVNNHNIHKKVPPKGRDDDDDNTGGQSGGGGPPIIRARLMQTQSSMPSEQTDGGNIVVEGGQTLVCA
NLPGFIFIVWRHLSL