CuGenDBv2

Gene ID	Sed0006692
Organism	Sechium edule (Chayote v1)
Description	Protein FAM33A
Genome location	LG13:24393335..24399710
RNA-Seq Expression	Sed0006692
Synteny	Sed0006692
Gene Ontology terms	GO:0000278 - mitotic cell cycle (biological process) GO:0007059 - chromosome segregation (biological process) GO:0051301 - cell division (biological process) GO:0000940 - condensed chromosome outer kinetochore (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0005876 - spindle microtubule (cellular component) GO:0008017 - microtubule binding (molecular function)
InterPro domains	IPR026762 - Spindle and kinetochore-associated protein 2 IPR042091 - Ska2, N-terminal

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6591515.1 hypothetical protein SDJN03_13861, partial [Cucurbita argyrosperma subsp. sororia]

1.5e-69

89.03

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Query:  MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRDDISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQAS
        MG DHLHQHHQAADGLTNLFTKANHDLS+VQ+RLEKEFQ+IY DSANPMKL  RIKKIRDDISTLKE+CREVLMAKQDVIDKARTVLV NRNM+ KMQAS
Subjt:  MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRDDISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQAS

Query:  MGKPFVSDADDPAFSQFKQITEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVVQ
        MGKPFVSD DDPAF QFKQITEEWT QVQSKIGEDGQEDA+ +DVNKLLFSAVVQ
Subjt:  MGKPFVSDADDPAFSQFKQITEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVVQ

XP_022935897.1 spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita moschata]

3.9e-70

89.68

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Query:  MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRDDISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQAS
        MG DHLHQHHQAADGLTNLFTKANHDLS+VQ+RLEKEFQ+IY DSANPMKL  RIKKIRDDISTLKE+CREVLMAKQDVIDKARTVLV NRNM+ KMQAS
Subjt:  MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRDDISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQAS

Query:  MGKPFVSDADDPAFSQFKQITEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVVQ
        MGKPFVSD DDPAF QFKQITEEWT QVQSKIGEDGQEDA+S+DVNKLLFSAVVQ
Subjt:  MGKPFVSDADDPAFSQFKQITEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVVQ

XP_022977128.1 spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita maxima]

1.7e-68

88.39

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Query:  MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRDDISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQAS
        M  D LHQHHQAADGLTNLFTKANHDLS+VQ+RLEKEFQ+IY DSANPMKL  RIKKIRDDISTLKE+CR+VLMAKQDVIDKARTVLV NRNML+KMQAS
Subjt:  MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRDDISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQAS

Query:  MGKPFVSDADDPAFSQFKQITEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVVQ
        MGKPFVSD DDPAF QFKQITEEWT QVQSKIGEDGQEDA+S+DVNKLLFSAVVQ
Subjt:  MGKPFVSDADDPAFSQFKQITEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVVQ

XP_023534877.1 spindle and kinetochore-associated protein 2 isoform X1 [Cucurbita pepo subsp. pepo]

7.4e-69

89.03

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Query:  MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRDDISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQAS
        M  D LHQHHQAADGLTNLFTKANHDLS+VQ+RLEKEFQ+IY DSANPMKL  RIKKIRDDISTLKE+CREVLMAKQDVIDKARTVLV NRNML KMQAS
Subjt:  MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRDDISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQAS

Query:  MGKPFVSDADDPAFSQFKQITEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVVQ
        MGKPFVSD DDPAF QFKQITEEWT QVQSKIGEDGQEDA+S+DVNKLLFSAVVQ
Subjt:  MGKPFVSDADDPAFSQFKQITEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVVQ

XP_038898183.1 spindle and kinetochore-associated protein 2 [Benincasa hispida]

8.8e-70

89.1

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Query:  MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRDDISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQAS
        M  DHLHQHHQAADGLTNLFTKANHDLS+VQ+RLEKEFQ+IY +SANPMKLVSRIKKIRDDISTLKE+CREVLMAKQDVIDKARTVLV NRNMLQK+QAS
Subjt:  MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRDDISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQAS

Query:  MGKPFVSDADDPAFSQFKQITEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVVQA
        MG PFVSD DDPAF++FKQITEEWT QVQSK GEDGQEDAD NDVNKLLFSAVVQA
Subjt:  MGKPFVSDADDPAFSQFKQITEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVVQA

TrEMBL top hits

e value

%identity

Alignment

A0A6J1CJF1 Protein FAM33A

5.2e-68

87.66

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Query:  MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRDDISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQAS
        MG  HLHQHHQAADGL NLFTKANHDLS+VQ+RLEKEFQ+IY DSANPMKLVSRIKKIRDDISTL+E+CRE+LMAKQDVIDKARTVLV NRNMLQKMQAS
Subjt:  MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRDDISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQAS

Query:  MGKPFVSDADDPAFSQFKQITEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVV
        MG P VSD DD AF+QFK+ITEEWT QVQSKIG+DGQEDADSNDVNKLLFSAVV
Subjt:  MGKPFVSDADDPAFSQFKQITEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVV

A0A6J1F6V9 Protein FAM33A

1.9e-70

89.68

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Query:  MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRDDISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQAS
        MG DHLHQHHQAADGLTNLFTKANHDLS+VQ+RLEKEFQ+IY DSANPMKL  RIKKIRDDISTLKE+CREVLMAKQDVIDKARTVLV NRNM+ KMQAS
Subjt:  MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRDDISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQAS

Query:  MGKPFVSDADDPAFSQFKQITEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVVQ
        MGKPFVSD DDPAF QFKQITEEWT QVQSKIGEDGQEDA+S+DVNKLLFSAVVQ
Subjt:  MGKPFVSDADDPAFSQFKQITEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVVQ

A0A6J1FBS9 Protein FAM33A

1.2e-67

88.39

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Query:  MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRDDISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQAS
        MG DHLHQHHQAADGLTNLFTKANHDLS+VQ+RLEKEFQ+IY DSANPMKL  RIKKIRDDISTLKE+CREVLMAKQDVIDKARTVLV NRNM+ KMQAS
Subjt:  MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRDDISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQAS

Query:  MGKPFVSDADDPAFSQFKQITEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVVQ
        MGKPFVSD DDPAF QFKQITEEWT QVQSKI  DGQEDA+S+DVNKLLFSAVVQ
Subjt:  MGKPFVSDADDPAFSQFKQITEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVVQ

A0A6J1IP41 Protein FAM33A

8.0e-69

88.39

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Query:  MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRDDISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQAS
        M  D LHQHHQAADGLTNLFTKANHDLS+VQ+RLEKEFQ+IY DSANPMKL  RIKKIRDDISTLKE+CR+VLMAKQDVIDKARTVLV NRNML+KMQAS
Subjt:  MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRDDISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQAS

Query:  MGKPFVSDADDPAFSQFKQITEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVVQ
        MGKPFVSD DDPAF QFKQITEEWT QVQSKIGEDGQEDA+S+DVNKLLFSAVVQ
Subjt:  MGKPFVSDADDPAFSQFKQITEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVVQ

A0A6J1IQK7 Protein FAM33A

4.9e-66

87.1

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Query:  MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRDDISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQAS
        M  D LHQHHQAADGLTNLFTKANHDLS+VQ+RLEKEFQ+IY DSANPMKL  RIKKIRDDISTLKE+CR+VLMAKQDVIDKARTVLV NRNML+KMQAS
Subjt:  MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRDDISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQAS

Query:  MGKPFVSDADDPAFSQFKQITEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVVQ
        MGKPFVSD DDPAF QFKQITEEWT QVQSKI  DGQEDA+S+DVNKLLFSAVVQ
Subjt:  MGKPFVSDADDPAFSQFKQITEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVVQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G24970.1 unknown protein

2.9e-39

53.38

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Query:  HQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRDDISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQASMGKPFV
        + HHQA D L N+F++A+HDL++V  +L+KEFQ++Y  +ANPMKL+ RIKK+++D++ LK +C ++L AKQD+IDKA+T LV N N++QKM AS+G+   
Subjt:  HQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRDDISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQASMGKPFV

Query:  SDADDPAFSQFKQITEEWTAQVQSK-IGEDGQEDADSNDVNKLLFSAV
         D DD A + F QI +EWT QV+S+ +GE   EDAD  D+NK+LFSA+
Subjt:  SDADDPAFSQFKQITEEWTAQVQSK-IGEDGQEDADSNDVNKLLFSAV

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGGGCCGATCATCTTCATCAGCATCATCAAGCGGCCGATGGATTGACGAACTTGTTCACGAAGGCGAATCACGATCTCTCGTTGGTTCAGCACAGGCTCGAGAAGGA
GTTTCAGGAAATCTATTCTGATAGCGCGAATCCAATGAAGTTAGTTTCTAGGATAAAGAAGATACGGGATGATATATCAACCTTGAAAGAGGAGTGTCGTGAAGTTTTGA
TGGCCAAGCAGGATGTAATTGATAAGGCTCGGACGGTTCTGGTTAGGAACAGAAACATGCTGCAAAAAATGCAAGCATCCATGGGCAAACCCTTTGTCAGCGATGCCGAT
GATCCTGCATTTTCGCAATTCAAACAGATCACTGAAGAGTGGACAGCACAAGTTCAATCAAAAATTGGTGAAGATGGCCAAGAGGACGCTGACTCTAATGACGTCAACAA
GTTGCTATTCTCAGCTGTAGTACAGGCATAG

mRNA sequence

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ATTCATATCCCCCATCACCTCATCTGCTCTTTCATTTGAAAGAAAGCAAATACAGAATCCATTGGCGCCGAAGAAACTTCAAAAAATCGAGAGAGCGCGAAAACCCTAGC
GGAGAGATCGAGAGAGAATGGGGGCCGATCATCTTCATCAGCATCATCAAGCGGCCGATGGATTGACGAACTTGTTCACGAAGGCGAATCACGATCTCTCGTTGGTTCAG
CACAGGCTCGAGAAGGAGTTTCAGGAAATCTATTCTGATAGCGCGAATCCAATGAAGTTAGTTTCTAGGATAAAGAAGATACGGGATGATATATCAACCTTGAAAGAGGA
GTGTCGTGAAGTTTTGATGGCCAAGCAGGATGTAATTGATAAGGCTCGGACGGTTCTGGTTAGGAACAGAAACATGCTGCAAAAAATGCAAGCATCCATGGGCAAACCCT
TTGTCAGCGATGCCGATGATCCTGCATTTTCGCAATTCAAACAGATCACTGAAGAGTGGACAGCACAAGTTCAATCAAAAATTGGTGAAGATGGCCAAGAGGACGCTGAC
TCTAATGACGTCAACAAGTTGCTATTCTCAGCTGTAGTACAGGCATAGTCCAAAGAGTTTCTCGGGGGAAAATTGTTGCACCTAAGTAAGCAGATTTTCTTCACCATCCT
TCGTTCTGTTTGAAAAGAAACATTTGTGGAAACTGGAAAGTACAGAAATTTTGAAGAAAAATGATGGGTTTTCTGTGGTGAAGATGTGGCTTTTAGGGTTCAGATCTCAT
CGTACAGAAAGGTTTATGCTCTATTCAAATTGTGGCTTTTAAGTTCTCTTTCATTCTCGGTGCTCGTCTTATGAGCTGACTTCAACTCTCACAATATTTCAGTAATAATA
GTAATATAGTTCCAAATGTGTGATTGCCACAAATATAATGGAACAAAACTCCAATTTCTTGATGTG

Protein sequence

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MGADHLHQHHQAADGLTNLFTKANHDLSLVQHRLEKEFQEIYSDSANPMKLVSRIKKIRDDISTLKEECREVLMAKQDVIDKARTVLVRNRNMLQKMQASMGKPFVSDAD
DPAFSQFKQITEEWTAQVQSKIGEDGQEDADSNDVNKLLFSAVVQA

Sed0006692 (gene) of Chayote v1 genome