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Sed0006703 (gene) of Chayote v1 genome

Gene IDSed0006703
OrganismSechium edule (Chayote v1)
DescriptionProtein sickie like
Genome locationLG10:30348614..30352993
RNA-Seq ExpressionSed0006703
SyntenySed0006703
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586409.1 hypothetical protein SDJN03_19142, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2892.11Show/hide
Query:  MASPYDPNSREAAVRKKQSAPFKFLVPLIYAPALPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK
        MASPYDP SRE A  KK+SAPFKFLVPLIYAP LPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK
Subjt:  MASPYDPNSREAAVRKKQSAPFKFLVPLIYAPALPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK

XP_022143221.1 uncharacterized protein LOC111013138 [Momordica charantia]4.1e-2889.47Show/hide
Query:  MASPYDPNSREAAVRKKQSAPFKFLVPLIYAPALPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK
        MA+PYDP +RE AVRKKQ AP KFLVPL+YAP LPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK
Subjt:  MASPYDPNSREAAVRKKQSAPFKFLVPLIYAPALPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK

XP_022938302.1 uncharacterized protein LOC111444436 [Cucurbita moschata]1.8e-2892.11Show/hide
Query:  MASPYDPNSREAAVRKKQSAPFKFLVPLIYAPALPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK
        MASPYDP SRE A  KK+SAPFKFLVPLIYAP LPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK
Subjt:  MASPYDPNSREAAVRKKQSAPFKFLVPLIYAPALPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK

XP_022966034.1 uncharacterized protein LOC111465738 [Cucurbita maxima]1.8e-2892.11Show/hide
Query:  MASPYDPNSREAAVRKKQSAPFKFLVPLIYAPALPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK
        MASPYDP SRE A  KK+SAPFKFLVPLIYAP LPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK
Subjt:  MASPYDPNSREAAVRKKQSAPFKFLVPLIYAPALPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK

XP_038891091.1 uncharacterized protein LOC120080491 isoform X2 [Benincasa hispida]2.4e-2889.47Show/hide
Query:  MASPYDPNSREAAVRKKQSAPFKFLVPLIYAPALPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK
        MA+P+DP+SRE AV +KQSAPFKFLVPL+YAP LPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK
Subjt:  MASPYDPNSREAAVRKKQSAPFKFLVPLIYAPALPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK

TrEMBL top hitse value%identityAlignment
A0A1S3C7Y6 uncharacterized protein LOC1034975038.2e-2789.61Show/hide
Query:  MAS-PYDPNSREAAVRKKQSAPFKFLVPLIYAPALPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK
        MAS P DP+SREA  R KQSAPFKFLVPL+YAP LPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK
Subjt:  MAS-PYDPNSREAAVRKKQSAPFKFLVPLIYAPALPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK

A0A6J1CPL9 uncharacterized protein LOC1110131382.0e-2889.47Show/hide
Query:  MASPYDPNSREAAVRKKQSAPFKFLVPLIYAPALPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK
        MA+PYDP +RE AVRKKQ AP KFLVPL+YAP LPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK
Subjt:  MASPYDPNSREAAVRKKQSAPFKFLVPLIYAPALPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK

A0A6J1FDN8 uncharacterized protein LOC1114444368.8e-2992.11Show/hide
Query:  MASPYDPNSREAAVRKKQSAPFKFLVPLIYAPALPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK
        MASPYDP SRE A  KK+SAPFKFLVPLIYAP LPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK
Subjt:  MASPYDPNSREAAVRKKQSAPFKFLVPLIYAPALPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK

A0A6J1HSI9 uncharacterized protein LOC1114657388.8e-2992.11Show/hide
Query:  MASPYDPNSREAAVRKKQSAPFKFLVPLIYAPALPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK
        MASPYDP SRE A  KK+SAPFKFLVPLIYAP LPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK
Subjt:  MASPYDPNSREAAVRKKQSAPFKFLVPLIYAPALPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK

A0A6J1KDE7 uncharacterized protein LOC1114938831.4e-2685.53Show/hide
Query:  MASPYDPNSREAAVRKKQSAPFKFLVPLIYAPALPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK
        MA+P+D NSRE  V KK+SAP KFLVPL+YAP LPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLV+DIYDAESK
Subjt:  MASPYDPNSREAAVRKKQSAPFKFLVPLIYAPALPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G68680.1 unknown protein1.3e-2475Show/hide
Query:  MASPYDPNSREAAVRKKQSAPFKFLVPLIYAPALPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK
        MAS  DP S+    RKK+ AP KFLVPLIYAPALPLIR++LR  PV+RDRLF  VL GAFAHGFYLVTDIYDAESK
Subjt:  MASPYDPNSREAAVRKKQSAPFKFLVPLIYAPALPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCGCCATACGATCCCAATTCTCGGGAGGCGGCTGTTCGGAAGAAGCAATCAGCCCCATTCAAGTTCTTGGTTCCTCTCATTTATGCCCCTGCTCTTCCTCTCAT
TAGAATTGCTCTGCGAAAGAACCCTGTTGTTAGAGATCGGCTGTTTACGGCGGTTTTGGCCGGCGCTTTTGCCCATGGCTTTTACTTGGTAACTGATATCTATGATGCAG
AGAGCAAGTAA
mRNA sequenceShow/hide mRNA sequence
ACAAGAGGTTTTTGTCAAATTACATCATTCCATTTCAGCGGCAGAAGCTGATTTTCCAGTAGCCCGCCGCCGCCGCCCGCCGCCGTTGATCATCCTCCTCCGCCATGGCC
TCGCCATACGATCCCAATTCTCGGGAGGCGGCTGTTCGGAAGAAGCAATCAGCCCCATTCAAGTTCTTGGTTCCTCTCATTTATGCCCCTGCTCTTCCTCTCATTAGAAT
TGCTCTGCGAAAGAACCCTGTTGTTAGAGATCGGCTGTTTACGGCGGTTTTGGCCGGCGCTTTTGCCCATGGCTTTTACTTGGTAACTGATATCTATGATGCAGAGAGCA
AGTAATGAACCAACCGCTGCCAAGTAACCCCTCACTCAAAGCCTCATTTTTGTTACCTTCCTTTTTCTTTTCTTTATTTGATATTTTTCAATGAATTATATTTCACATTA
GGGTGACATGAGGATGCACTGTCTATGTTTCACCTTTTCTTTTTCATAAAATAAAAACAAAAACTCTGTATTAGAGTAT
Protein sequenceShow/hide protein sequence
MASPYDPNSREAAVRKKQSAPFKFLVPLIYAPALPLIRIALRKNPVVRDRLFTAVLAGAFAHGFYLVTDIYDAESK