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Sed0006736 (gene) of Chayote v1 genome

Gene IDSed0006736
OrganismSechium edule (Chayote v1)
Descriptionpolcalcin Syr v 3-like
Genome locationLG07:486467..486718
RNA-Seq ExpressionSed0006736
SyntenySed0006736
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008445690.1 PREDICTED: polcalcin Syr v 3-like [Cucumis melo]5.8e-2878.31Show/hide
Query:  MAEDLERAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCKRL
        MA+   + ECERIFKRFD++GDGKISLSELE AL+ LGSS+ EEV RRM+EIDKDGNG ISL+ELCDF RANPDLMKEVCKRL
Subjt:  MAEDLERAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCKRL

XP_022150429.1 polcalcin Syr v 3-like [Momordica charantia]2.2e-2779.76Show/hide
Query:  MAED-LERAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCKRL
        MA+D   RAECERIF RFD +GDG+ISLSELE AL+ LGSSS EEVRRRM+EIDKDG+G ISL+ELCDF RANPDLMKEVCKRL
Subjt:  MAED-LERAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCKRL

XP_022929895.1 polcalcin Phl p 7-like [Cucurbita moschata]2.6e-2882.14Show/hide
Query:  MAE-DLERAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCKRL
        MAE +  RAECERIF RFD +GDGKISLSELE AL+ LGSSS EEVRRRM+EIDKDGNG ISLDELC+F RANPDLMKEVCKRL
Subjt:  MAE-DLERAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCKRL

XP_023549323.1 polcalcin Phl p 7-like [Cucurbita pepo subsp. pepo]7.6e-2884.42Show/hide
Query:  RAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCKRL
        RAECERIF RFD +GDGKISLSELE AL+ LGSSS EEVRRRM+EIDKDGNG ISLDELC+F RANPDLMKEVC+RL
Subjt:  RAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCKRL

XP_038886760.1 polcalcin Phl p 7-like [Benincasa hispida]3.1e-2988.31Show/hide
Query:  RAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCKRL
        R ECERIFKRFD DGDGKISLSELE AL  LGSSS EEVRRRM+EIDKDGNG ISLDELCDF RANPDLMKEVCKRL
Subjt:  RAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCKRL

TrEMBL top hitse value%identityAlignment
A0A0A0KAW9 Uncharacterized protein3.7e-2882.5Show/hide
Query:  DLERAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCKRL
        D  R ECERIFKRFDV+GDGKISLSELE AL+ LGSS+ EEV RRM+EIDKDGNG ISL+ELCDF RANPDLMKEVCKRL
Subjt:  DLERAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCKRL

A0A1S3BDB5 polcalcin Syr v 3-like2.8e-2878.31Show/hide
Query:  MAEDLERAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCKRL
        MA+   + ECERIFKRFD++GDGKISLSELE AL+ LGSS+ EEV RRM+EIDKDGNG ISL+ELCDF RANPDLMKEVCKRL
Subjt:  MAEDLERAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCKRL

A0A5A7V7E6 Polcalcin Syr v 3-like2.8e-2878.31Show/hide
Query:  MAEDLERAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCKRL
        MA+   + ECERIFKRFD++GDGKISLSELE AL+ LGSS+ EEV RRM+EIDKDGNG ISL+ELCDF RANPDLMKEVCKRL
Subjt:  MAEDLERAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCKRL

A0A6J1DA15 polcalcin Syr v 3-like1.1e-2779.76Show/hide
Query:  MAED-LERAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCKRL
        MA+D   RAECERIF RFD +GDG+ISLSELE AL+ LGSSS EEVRRRM+EIDKDG+G ISL+ELCDF RANPDLMKEVCKRL
Subjt:  MAED-LERAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCKRL

A0A6J1EVJ6 polcalcin Phl p 7-like1.3e-2882.14Show/hide
Query:  MAE-DLERAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCKRL
        MAE +  RAECERIF RFD +GDGKISLSELE AL+ LGSSS EEVRRRM+EIDKDGNG ISLDELC+F RANPDLMKEVCKRL
Subjt:  MAE-DLERAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCKRL

SwissProt top hitse value%identityAlignment
O82040 Polcalcin Phl p 76.7e-1961.73Show/hide
Query:  MAEDLERAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCK
        MA+D+     ERIFKRFD +GDGKISLSEL  AL TLGS+S +EV+R MAEID DG+G I  +E   F  ANP LMK+V K
Subjt:  MAEDLERAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCK

P58171 Polcalcin Syr v 31.5e-1861.73Show/hide
Query:  MAEDLERAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCK
        MAE++  AE ERIFKRFD +GDGKIS SEL   L TLGS + EE++R MAEID DG+G IS +E  DF RAN  L+K+V K
Subjt:  MAEDLERAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCK

P94092 Polcalcin Cyn d 72.5e-1860.53Show/hide
Query:  ERAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCK
        +  + E IFKRFD +GDGKISL+EL  AL TLGS+S +EV+R MAEID DG+G I  DE   F  ANP LMK+V K
Subjt:  ERAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCK

Q84V36 Polcalcin Che a 31.1e-1863.41Show/hide
Query:  AEDLER--AECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCK
        AED  +  A+ ERIFKRFD +GDGKIS SEL  AL TLGS + +EVRR MAEID DG+G IS DE  DF RAN  L+K+V K
Subjt:  AEDLER--AECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCK

Q9LF54 Probable calcium-binding protein CML291.9e-1859.26Show/hide
Query:  MAEDLERAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCK
        MA+  E+AE +RIFK+FD +GDGKIS +ELE AL TLGS + ++V+R MAEID DG+G IS  E  DF  AN  LMK+V K
Subjt:  MAEDLERAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCK

Arabidopsis top hitse value%identityAlignment
AT1G24620.1 EF hand calcium-binding protein family1.4e-0840Show/hide
Query:  ERAECERIFKRFDVDGDGKISLSELEIALNTLGSS-SQEEVRRRMAEIDKDGNGIISLDELCDFHRANPD
        E  E E +FK+FDV+GDGKIS  EL   + +LG    +EE+ + + EID+ G+G I+ +E  + +    D
Subjt:  ERAECERIFKRFDVDGDGKISLSELEIALNTLGSS-SQEEVRRRMAEIDKDGNGIISLDELCDFHRANPD

AT1G66400.1 calmodulin like 231.9e-0847.37Show/hide
Query:  ECERIFKRFDVDGDGKISLSELEIALNTLG-SSSQEEVRRRMAEIDKDGNGIISLDE
        + +++F+RFD + DGKIS+ EL+  +  L  ++SQEE +  M E D DGNG I LDE
Subjt:  ECERIFKRFDVDGDGKISLSELEIALNTLG-SSSQEEVRRRMAEIDKDGNGIISLDE

AT3G03430.1 Calcium-binding EF-hand family protein6.8e-1956.79Show/hide
Query:  MAEDLERAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCK
        MA+  E+AE +RIFK+FD +GDGKIS +EL  AL  LGS + E+++R MAEID DG+G IS  E  DF  AN  LMK+V K
Subjt:  MAEDLERAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCK

AT4G37010.1 centrin 22.1e-0741.67Show/hide
Query:  ERAECERIFKRFDVDGDGKISLSELEIALNTLG-SSSQEEVRRRMAEIDKDGNGIISLDE
        +R E   IF  FD+DG G I  SEL +A+ +LG   + +++   MAE+DK+ +G I  DE
Subjt:  ERAECERIFKRFDVDGDGKISLSELEIALNTLG-SSSQEEVRRRMAEIDKDGNGIISLDE

AT5G17480.1 pollen calcium-binding protein 11.4e-1959.26Show/hide
Query:  MAEDLERAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCK
        MA+  E+AE +RIFK+FD +GDGKIS +ELE AL TLGS + ++V+R MAEID DG+G IS  E  DF  AN  LMK+V K
Subjt:  MAEDLERAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGGACTTAGAGAGGGCGGAATGCGAACGGATCTTTAAGCGATTCGACGTGGATGGCGACGGCAAGATCTCGCTATCGGAGCTGGAGATCGCTCTGAACACGCT
CGGCTCCTCCTCGCAGGAGGAAGTCCGGCGGCGGATGGCTGAGATCGACAAGGACGGCAACGGCATCATCTCACTCGACGAACTCTGCGACTTCCACAGGGCCAATCCCG
ATTTGATGAAGGAGGTTTGCAAGAGGCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAGGACTTAGAGAGGGCGGAATGCGAACGGATCTTTAAGCGATTCGACGTGGATGGCGACGGCAAGATCTCGCTATCGGAGCTGGAGATCGCTCTGAACACGCT
CGGCTCCTCCTCGCAGGAGGAAGTCCGGCGGCGGATGGCTGAGATCGACAAGGACGGCAACGGCATCATCTCACTCGACGAACTCTGCGACTTCCACAGGGCCAATCCCG
ATTTGATGAAGGAGGTTTGCAAGAGGCTTTAG
Protein sequenceShow/hide protein sequence
MAEDLERAECERIFKRFDVDGDGKISLSELEIALNTLGSSSQEEVRRRMAEIDKDGNGIISLDELCDFHRANPDLMKEVCKRL