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Sed0006755 (gene) of Chayote v1 genome

Gene IDSed0006755
OrganismSechium edule (Chayote v1)
DescriptionComplex I-B22
Genome locationLG05:44133776..44137902
RNA-Seq ExpressionSed0006755
SyntenySed0006755
Gene Ontology termsGO:0006120 - mitochondrial electron transport, NADH to ubiquinone (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR008011 - Complex 1 LYR protein
IPR033034 - NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605042.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9, partial [Cucurbita argyrosperma subsp. sororia]2.0e-5590.52Show/hide
Query:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS  ST GY  RRAAQ+ERVRILYRRALKDTLNWAVHRHLFYRDASDLRERF+ANK+VEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYDYGREGH
        PP G+EIIYDYGRE H
Subjt:  PPPGIEIIYDYGREGH

XP_022146081.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Momordica charantia]7.0e-5692.24Show/hide
Query:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSF ST GY  RRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERF+ANKHVEDLDTIDKLIA GEAS+NKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYDYGREGH
        PP GIEIIYDYGRE H
Subjt:  PPPGIEIIYDYGREGH

XP_022944756.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like isoform X1 [Cucurbita moschata]8.3e-5792.24Show/hide
Query:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSF ST GY  RRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLD ID++IADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYDYGREGH
        PPPGIEIIY+YGRE H
Subjt:  PPPGIEIIYDYGREGH

XP_023532128.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9-like [Cucurbita pepo subsp. pepo]2.4e-5692.24Show/hide
Query:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS  ST GY  RRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERF+ANK+VED+DTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYDYGREGH
        PPPGIEIIYDYGRE H
Subjt:  PPPGIEIIYDYGREGH

XP_038902763.1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 [Benincasa hispida]1.6e-5591.38Show/hide
Query:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSF ST GY  RRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERF+A+KHVEDLDTID+LIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYDYGREGH
        PP GIEIIY YGRE H
Subjt:  PPPGIEIIYDYGREGH

TrEMBL top hitse value%identityAlignment
A0A6J1CYA5 Complex I-B223.4e-5692.24Show/hide
Query:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSF ST GY  RRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERF+ANKHVEDLDTIDKLIA GEAS+NKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYDYGREGH
        PP GIEIIYDYGRE H
Subjt:  PPPGIEIIYDYGREGH

A0A6J1FYY7 Complex I-B224.0e-5792.24Show/hide
Query:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSF ST GY  RRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLD ID++IADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYDYGREGH
        PPPGIEIIY+YGRE H
Subjt:  PPPGIEIIYDYGREGH

A0A6J1G8K3 Complex I-B226.4e-5589.66Show/hide
Query:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS  ST GY  RRAAQ+ERVRILYRRALKDTL WAVHRHLFYRDASDLRERF+ANK+VEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYDYGREGH
        PP G+EIIYDYGRE H
Subjt:  PPPGIEIIYDYGREGH

A0A6J1J845 Complex I-B224.0e-5792.24Show/hide
Query:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MSF ST GY  RRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLD ID++IADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYDYGREGH
        PPPGIEIIY+YGRE H
Subjt:  PPPGIEIIYDYGREGH

A0A6J1L2P5 Complex I-B221.7e-5589.66Show/hide
Query:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS  ST GY  RRAAQ+ERVRILYRRALK+TLNWAVHRHLFYRDASDLRERF+ANK+VEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
Subjt:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYDYGREGH
        PPPG+EIIY+YGRE H
Subjt:  PPPGIEIIYDYGREGH

SwissProt top hitse value%identityAlignment
Q02369 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 92.7e-1035.05Show/hide
Query:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR
        M+FLS+  Y       +++V  LY+RAL+   +W +HR  +   A  LR RFD +K+ +D+    +L+ + E  +   +HP PYI P +PGG+ + R
Subjt:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR

Q0MQE8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 93.3e-0832.99Show/hide
Query:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR
        M+FL++  Y   R    ++V  LY+RAL+   +W V R  +   A  +R RF+ +K+ +D+    +L+ + E  +   +HP PYI P +PGG+ + R
Subjt:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR

Q945M1 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 99.2e-5181.58Show/hide
Query:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS +ST  Y  RRAAQKERVRILYRRALKDTLNWAVHRH+FYRDASDLRE+F+ N+ VED+D IDKLIA GEA YNKWRHPDPYIVPWAPGGSKF RNPT
Subjt:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYDYGRE
        PP GIEI+Y+YG E
Subjt:  PPPGIEIIYDYGRE

Q9CQJ8 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 98.7e-0931.96Show/hide
Query:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR
        M+F +   Y       +++V  LY+RAL+   +W +HR  +   A  +R RF+ +K+ +D+    +L+ + E  + + +HP PYI P +PGG+ F R
Subjt:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR

Q9Y6M9 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 95.6e-0831.96Show/hide
Query:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR
        M+FL++  Y       +++V  LY+RAL+   +W V R  +   A  +R RF+ +K+ +D+    +L+ + E  +   +HP PYI P +PGG+ + R
Subjt:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTR

Arabidopsis top hitse value%identityAlignment
AT4G34700.1 LYR family of Fe/S cluster biogenesis protein6.5e-5281.58Show/hide
Query:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT
        MS +ST  Y  RRAAQKERVRILYRRALKDTLNWAVHRH+FYRDASDLRE+F+ N+ VED+D IDKLIA GEA YNKWRHPDPYIVPWAPGGSKF RNPT
Subjt:  MSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASYNKWRHPDPYIVPWAPGGSKFTRNPT

Query:  PPPGIEIIYDYGRE
        PP GIEI+Y+YG E
Subjt:  PPPGIEIIYDYGRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACGGCGCGTTTATATGGTCATTAAAATGTTTAAACGGCGTCATCTCCAGAGTTTCACAAACACAGTGATCTCGAAGATACCGGAGAGAGAAACGAGAGAGATGAG
CTTTTTGTCGACGACGGGATATTCCGTCCGGCGAGCCGCCCAGAAGGAGAGAGTTCGGATCCTTTACCGGCGAGCCCTCAAAGACACTCTCAACTGGGCCGTCCATCGCC
ACCTCTTCTACCGAGATGCTTCCGATCTCCGGGAGAGATTTGATGCAAACAAGCACGTGGAAGATCTTGACACAATAGACAAGCTGATTGCTGATGGGGAAGCTTCCTAC
AATAAGTGGCGACATCCTGACCCCTACATTGTTCCTTGGGCTCCAGGTGGTTCTAAGTTTACTCGAAACCCAACTCCACCTCCTGGGATTGAAATAATATATGACTATGG
AAGGGAAGGTCACTGA
mRNA sequenceShow/hide mRNA sequence
AGCGACCCAAATATTATTTTACAATGTGAGGCTGGAGAGTTGAAAACCCTTTAACTGTAACGCCGAATAAACGGTCCGTTATCTCCCACTCCTCTTTCTCTTTCTCCTTC
CACATGAAACGGCGCGTTTATATGGTCATTAAAATGTTTAAACGGCGTCATCTCCAGAGTTTCACAAACACAGTGATCTCGAAGATACCGGAGAGAGAAACGAGAGAGAT
GAGCTTTTTGTCGACGACGGGATATTCCGTCCGGCGAGCCGCCCAGAAGGAGAGAGTTCGGATCCTTTACCGGCGAGCCCTCAAAGACACTCTCAACTGGGCCGTCCATC
GCCACCTCTTCTACCGAGATGCTTCCGATCTCCGGGAGAGATTTGATGCAAACAAGCACGTGGAAGATCTTGACACAATAGACAAGCTGATTGCTGATGGGGAAGCTTCC
TACAATAAGTGGCGACATCCTGACCCCTACATTGTTCCTTGGGCTCCAGGTGGTTCTAAGTTTACTCGAAACCCAACTCCACCTCCTGGGATTGAAATAATATATGACTA
TGGAAGGGAAGGTCACTGAAATCTTCATTTTCGCGGTAATAAATAAAGGTTTAAATGTTCGGTTGCTTTGTCTGAGATGATGATGATGATGATGATAAAGGGAACTCTTT
GATGTGTAAACTTTGAATTATAGTAATTCCTTGTTCATTTGCTATCTACTTTTGCCTAGTTGTGCAAATATGACATTGAAACATCACCATTGGAACAGTGTGTGATGTGT
TCATGTGGGTAAGTTACTCCTTTCTTTTATACCCTCCTTTCCTTTTGTGAGATTTTGGCTGTCATTGCATTCAATTTTGAGACCATGGCTACTTCGATATACTTCGAATG
AGGGTGAATTACATGGCTTTTTAAATAATAA
Protein sequenceShow/hide protein sequence
MKRRVYMVIKMFKRRHLQSFTNTVISKIPERETREMSFLSTTGYSVRRAAQKERVRILYRRALKDTLNWAVHRHLFYRDASDLRERFDANKHVEDLDTIDKLIADGEASY
NKWRHPDPYIVPWAPGGSKFTRNPTPPPGIEIIYDYGREGH