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Sed0006790 (gene) of Chayote v1 genome

Gene IDSed0006790
OrganismSechium edule (Chayote v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR9-like
Genome locationLG12:25895035..25895900
RNA-Seq ExpressionSed0006790
SyntenySed0006790
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590203.1 Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. sororia]3.3e-2763.2Show/hide
Query:  MASKGGRTRRVRNPTTKLKKKNKKKMIISNKNQGRRIISSKIEEEIEASSCSAMA--ANIESSSASSSDFEECCTPKADRFRIPEIQICPPAPKKQRLFP
        MASKGG  R     T K + K  +K I   K+Q +RI+S+K  EEIE SS  AMA  A +E S++SSSDFEEC TPKA+RFRIPEI+ICPPAPKKQR+  
Subjt:  MASKGGRTRRVRNPTTKLKKKNKKKMIISNKNQGRRIISSKIEEEIEASSCSAMA--ANIESSSASSSDFEECCTPKADRFRIPEIQICPPAPKKQRLFP

Query:  NCSLQKTSPIAFFASPDIELFFFFS
        NCS QK SPI+FFASPDIE+FFF S
Subjt:  NCSLQKTSPIAFFASPDIELFFFFS

KAG7022087.1 Cyclin-dependent protein kinase inhibitor SMR13, partial [Cucurbita argyrosperma subsp. argyrosperma]8.2e-3473.13Show/hide
Query:  MASKGGRTRRVRNPTTKLKKKNKKKMIISNKNQGRR-----IISSKIEEEIE---ASSCSAMAANIESSSASSSDFEECCTPKADRFRIPEIQICPPAPK
        MASKGGRTRR  NPT  L KK KKK+  S  N GRR     I+SSKI EEIE   ASS SAMAA  E   ASSSDFE C TPKADRF+IPEIQICPPAPK
Subjt:  MASKGGRTRRVRNPTTKLKKKNKKKMIISNKNQGRR-----IISSKIEEEIE---ASSCSAMAANIESSSASSSDFEECCTPKADRFRIPEIQICPPAPK

Query:  KQRLFPNCSLQKTSPIAFFASPDIELFFFFSQSH
        KQR   NCSLQK SPIAFFASPDIELFFFFSQS+
Subjt:  KQRLFPNCSLQKTSPIAFFASPDIELFFFFSQSH

KGN66487.1 hypothetical protein Csa_006949 [Cucumis sativus]1.8e-2056.2Show/hide
Query:  MASKGGRTRRVRNPTTKLKKKNKK-KMIISNKNQGRRIISSKIEEEIEASSCSAMAANIESSSAS--SSDFEE-------CCTPKADRFRIPEIQICPPA
        MASK G  RR    TT  + KNKK K  I N N          EEEIE  + S+   N E  S S  S DFEE       C TPKA+RF+IPEI+ICPPA
Subjt:  MASKGGRTRRVRNPTTKLKKKNKK-KMIISNKNQGRRIISSKIEEEIEASSCSAMAANIESSSAS--SSDFEE-------CCTPKADRFRIPEIQICPPA

Query:  PKKQRLF----PNCSLQKTSPIAFFASPDIELFFFFS
        PKK+RLF     NCSLQ+ SPIAFFASPDIELFFFFS
Subjt:  PKKQRLF----PNCSLQKTSPIAFFASPDIELFFFFS

XP_022154348.1 cyclin-dependent protein kinase inhibitor SMR9-like [Momordica charantia]2.2e-2357.46Show/hide
Query:  MASKGGRTRRVRNPTTKLKKKNKKKMIISN--------KNQGRRIISSKIEEEIEASSCSAMAANIESSSASSSDFEECCTPKADRFRIPEIQICPPAPK
        MASKGG  R     + K+KKK+ ++M   N        KNQ      ++ E  +E +S SA  A  ES    SSD EECCTPKA+RFRIPEI+ICPPAPK
Subjt:  MASKGGRTRRVRNPTTKLKKKNKKKMIISN--------KNQGRRIISSKIEEEIEASSCSAMAANIESSSASSSDFEECCTPKADRFRIPEIQICPPAPK

Query:  KQRLFPNCS-LQKTSPIAFFASPDIELFFFFSQS
        KQR+F NCS LQ+ SPIAFFASPDIELFFFFS S
Subjt:  KQRLFPNCS-LQKTSPIAFFASPDIELFFFFSQS

XP_023530358.1 cyclin-dependent protein kinase inhibitor SMR9-like [Cucurbita pepo subsp. pepo]1.1e-3372.59Show/hide
Query:  MASKGGRTRRVRNPTTKLKKKNKKKMIISNKNQGRR------IISSKIEEEIE---ASSCSAMAANIESSSASSSDFEECCTPKADRFRIPEIQICPPAP
        MASKGGRTRR  NPT  L KK KKK+  S  N GRR      I+SSKI EEIE   ASS SAMAA  E   ASSSDFE C TPKADRF+IPEIQICPPAP
Subjt:  MASKGGRTRRVRNPTTKLKKKNKKKMIISNKNQGRR------IISSKIEEEIE---ASSCSAMAANIESSSASSSDFEECCTPKADRFRIPEIQICPPAP

Query:  KKQRLFPNCSLQKTSPIAFFASPDIELFFFFSQSH
        KKQR   NCSLQK SPIAFFASPDIELFFFFSQS+
Subjt:  KKQRLFPNCSLQKTSPIAFFASPDIELFFFFSQSH

TrEMBL top hitse value%identityAlignment
A0A0A0M041 Uncharacterized protein8.6e-2156.2Show/hide
Query:  MASKGGRTRRVRNPTTKLKKKNKK-KMIISNKNQGRRIISSKIEEEIEASSCSAMAANIESSSAS--SSDFEE-------CCTPKADRFRIPEIQICPPA
        MASK G  RR    TT  + KNKK K  I N N          EEEIE  + S+   N E  S S  S DFEE       C TPKA+RF+IPEI+ICPPA
Subjt:  MASKGGRTRRVRNPTTKLKKKNKK-KMIISNKNQGRRIISSKIEEEIEASSCSAMAANIESSSAS--SSDFEE-------CCTPKADRFRIPEIQICPPA

Query:  PKKQRLF----PNCSLQKTSPIAFFASPDIELFFFFS
        PKK+RLF     NCSLQ+ SPIAFFASPDIELFFFFS
Subjt:  PKKQRLF----PNCSLQKTSPIAFFASPDIELFFFFS

A0A2N9IRK5 Uncharacterized protein6.4e-1647.24Show/hide
Query:  GRTRRVRNPTTKLKKKNKKKMIISNKNQGRRIISSKIEEEIEASSCSAMAAN---------IESSSASSSDFEECCTPKADRFRIPEIQICPPAPKKQRL
        GRT   R PT K ++KN KK ++  KNQ    IS  +  +  +S+ +    +         I S     +    C TPKA RFRIPEI  CPPAPKKQR+
Subjt:  GRTRRVRNPTTKLKKKNKKKMIISNKNQGRRIISSKIEEEIEASSCSAMAAN---------IESSSASSSDFEECCTPKADRFRIPEIQICPPAPKKQRL

Query:  FPNCSLQKTSPIAFFASPDIELFFFFS
          NCSLQ+ SPIAFFA PD+ELFFFF+
Subjt:  FPNCSLQKTSPIAFFASPDIELFFFFS

A0A660KN86 Uncharacterized protein5.4e-1550.42Show/hide
Query:  GRTRRVRNPTTKLKKKNK-KKMIISNKNQGRRIISSKIEEEIEASSCSAMAANIESSSASSSDFEECCTPKADRFRIPEIQICPPAPKKQRLFPNCSLQK
        GR R    PT +  ++N  KK +  +K     IIS  +      SS + ++ +IE  S        CCTPKA RFRIPEI  CPPAPKKQRL  NCSLQ+
Subjt:  GRTRRVRNPTTKLKKKNK-KKMIISNKNQGRRIISSKIEEEIEASSCSAMAANIESSSASSSDFEECCTPKADRFRIPEIQICPPAPKKQRLFPNCSLQK

Query:  TSPIAFFASPDIELFFFFS
         SPIAFFA PD+ELFFFF+
Subjt:  TSPIAFFASPDIELFFFFS

A0A6J1DK32 cyclin-dependent protein kinase inhibitor SMR9-like1.1e-2357.46Show/hide
Query:  MASKGGRTRRVRNPTTKLKKKNKKKMIISN--------KNQGRRIISSKIEEEIEASSCSAMAANIESSSASSSDFEECCTPKADRFRIPEIQICPPAPK
        MASKGG  R     + K+KKK+ ++M   N        KNQ      ++ E  +E +S SA  A  ES    SSD EECCTPKA+RFRIPEI+ICPPAPK
Subjt:  MASKGGRTRRVRNPTTKLKKKNKKKMIISN--------KNQGRRIISSKIEEEIEASSCSAMAANIESSSASSSDFEECCTPKADRFRIPEIQICPPAPK

Query:  KQRLFPNCS-LQKTSPIAFFASPDIELFFFFSQS
        KQR+F NCS LQ+ SPIAFFASPDIELFFFFS S
Subjt:  KQRLFPNCS-LQKTSPIAFFASPDIELFFFFSQS

A0A7N2KKU1 Uncharacterized protein7.0e-1547.29Show/hide
Query:  MASKGGRTRRVRNPTTKLKKKNKKKMIISNKNQGRRIISSKIEEEIEASSCSAMAANIESSSASSSDFE------ECCTPKADRFRIPEIQICPPAPKKQ
        MA  G  T R R PT K ++K  KK ++  KNQ       K    + ++S +  + N + S  +S   E       C TPKA RF+IPEI  CPPAPKKQ
Subjt:  MASKGGRTRRVRNPTTKLKKKNKKKMIISNKNQGRRIISSKIEEEIEASSCSAMAANIESSSASSSDFE------ECCTPKADRFRIPEIQICPPAPKKQ

Query:  RLFPNCSLQKTSPIAFFASPDIELFFFFS
        R+  NCSLQ+ SPIAFFA PD+ELFFFF+
Subjt:  RLFPNCSLQKTSPIAFFASPDIELFFFFS

SwissProt top hitse value%identityAlignment
F4IWB3 Cyclin-dependent protein kinase inhibitor SMR132.8e-0836.89Show/hide
Query:  LKKKNKKKMIISNKNQGRRIISSKIEEEIEASSCSAMAANIESSSASSSDFEECCTPKADRFRIPEIQICPPAPKKQRLFPNCSLQKTSPIAFFASPDIE
        +  K  +K   + K   R     ++ +    ++ +  +    S +A  +    CCTPKA + RIPE+  CPPAPKKQR+  NC L++   I FFA P+IE
Subjt:  LKKKNKKKMIISNKNQGRRIISSKIEEEIEASSCSAMAANIESSSASSSDFEECCTPKADRFRIPEIQICPPAPKKQRLFPNCSLQKTSPIAFFASPDIE

Query:  LFF
        LFF
Subjt:  LFF

Q1G3Y4 Cyclin-dependent protein kinase inhibitor SMR154.9e-0541.18Show/hide
Query:  NIESSSASSSDFEECC--TPKADRFRIPEIQICPPAPKKQRLFPNCSLQKTSPIAFFASPDIELFFFF
        ++ SS+ S+++ E+ C  TP AD  RIP +  CPPAPKK++L    S     P  FF+ PD+E  F +
Subjt:  NIESSSASSSDFEECC--TPKADRFRIPEIQICPPAPKKQRLFPNCSLQKTSPIAFFASPDIELFFFF

Q3ECS5 Cyclin-dependent protein kinase inhibitor SMR93.6e-0836.59Show/hide
Query:  MASKGGRTRRVRNPTTKLKKKNKKKMIISNKNQGRRIISSKIEEEIEASSCSAMAANIESSSASSSDFEECCTPKADRFRIPEIQICPPAPKKQRLFPNC
        MASKG   + +R  TT+ +K++  K    N +         I  ++ ++S ++ +    ++ +  S    CCTP  ++ RIPE+  CPPAPKKQ++  NC
Subjt:  MASKGGRTRRVRNPTTKLKKKNKKKMIISNKNQGRRIISSKIEEEIEASSCSAMAANIESSSASSSDFEECCTPKADRFRIPEIQICPPAPKKQRLFPNC

Query:  SLQKTSPIAFFASPDIELFFFFS
        +L++   IAFFA PD+ELFF F+
Subjt:  SLQKTSPIAFFASPDIELFFFFS

Arabidopsis top hitse value%identityAlignment
AT1G51355.1 unknown protein2.6e-0936.59Show/hide
Query:  MASKGGRTRRVRNPTTKLKKKNKKKMIISNKNQGRRIISSKIEEEIEASSCSAMAANIESSSASSSDFEECCTPKADRFRIPEIQICPPAPKKQRLFPNC
        MASKG   + +R  TT+ +K++  K    N +         I  ++ ++S ++ +    ++ +  S    CCTP  ++ RIPE+  CPPAPKKQ++  NC
Subjt:  MASKGGRTRRVRNPTTKLKKKNKKKMIISNKNQGRRIISSKIEEEIEASSCSAMAANIESSSASSSDFEECCTPKADRFRIPEIQICPPAPKKQRLFPNC

Query:  SLQKTSPIAFFASPDIELFFFFS
        +L++   IAFFA PD+ELFF F+
Subjt:  SLQKTSPIAFFASPDIELFFFFS

AT1G60783.1 unknown protein3.5e-0641.18Show/hide
Query:  NIESSSASSSDFEECC--TPKADRFRIPEIQICPPAPKKQRLFPNCSLQKTSPIAFFASPDIELFFFF
        ++ SS+ S+++ E+ C  TP AD  RIP +  CPPAPKK++L    S     P  FF+ PD+E  F +
Subjt:  NIESSSASSSDFEECC--TPKADRFRIPEIQICPPAPKKQRLFPNCSLQKTSPIAFFASPDIELFFFF

AT3G20898.1 unknown protein2.0e-0936.89Show/hide
Query:  LKKKNKKKMIISNKNQGRRIISSKIEEEIEASSCSAMAANIESSSASSSDFEECCTPKADRFRIPEIQICPPAPKKQRLFPNCSLQKTSPIAFFASPDIE
        +  K  +K   + K   R     ++ +    ++ +  +    S +A  +    CCTPKA + RIPE+  CPPAPKKQR+  NC L++   I FFA P+IE
Subjt:  LKKKNKKKMIISNKNQGRRIISSKIEEEIEASSCSAMAANIESSSASSSDFEECCTPKADRFRIPEIQICPPAPKKQRLFPNCSLQKTSPIAFFASPDIE

Query:  LFF
        LFF
Subjt:  LFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTAAAGGAGGAAGAACAAGAAGGGTAAGAAATCCAACAACAAAATTGAAGAAGAAGAACAAGAAGAAGATGATCATCAGCAACAAGAATCAAGGTAGAAGGAT
TATTAGTTCTAAAATAGAAGAGGAAATTGAAGCTTCAAGCTGCTCTGCCATGGCTGCCAACATTGAATCATCCTCAGCTTCAAGCTCTGATTTTGAAGAGTGTTGCACTC
CAAAAGCAGACAGATTTAGAATCCCAGAGATCCAAATCTGCCCTCCAGCTCCAAAAAAGCAAAGGCTCTTTCCAAATTGTTCTTTGCAGAAAACTTCTCCAATTGCTTTC
TTTGCTTCACCAGATATAGAGCTTTTCTTCTTCTTCTCACAATCACATTAA
mRNA sequenceShow/hide mRNA sequence
CAAATCCCTCCATTTAACTCTTTCTCTCTCTCTCCTCAAACCTCCAACTCAATCCAGTCCTTTCATGGCTTCTTTCCAACCAAATCTCTCAATTTCCTGAAATGGGTTTC
TTCTAGATGTGAATAATCTCTCAAAAACAGAACAATTTTGAAAGAAGAAAACAGAGCCTGATCTCAAAAGCAAGCTCCCAATTTCAAATCATGGCTTCTAAAGGAGGAAG
AACAAGAAGGGTAAGAAATCCAACAACAAAATTGAAGAAGAAGAACAAGAAGAAGATGATCATCAGCAACAAGAATCAAGGTAGAAGGATTATTAGTTCTAAAATAGAAG
AGGAAATTGAAGCTTCAAGCTGCTCTGCCATGGCTGCCAACATTGAATCATCCTCAGCTTCAAGCTCTGATTTTGAAGAGTGTTGCACTCCAAAAGCAGACAGATTTAGA
ATCCCAGAGATCCAAATCTGCCCTCCAGCTCCAAAAAAGCAAAGGCTCTTTCCAAATTGTTCTTTGCAGAAAACTTCTCCAATTGCTTTCTTTGCTTCACCAGATATAGA
GCTTTTCTTCTTCTTCTCACAATCACATTAATTTAGGTTTTTTTTCTTTCAGCTCTCAAAATTAGCTTCTGGGTTTCTGTTCTTTCATCTTTATCATGGAAATTTCCTGT
TGGGGATGGGTTGATTTCCATAATTGTTCAAATTTATAGACCAAAAAAAAAGGGAATTGTTGATAGAGTAAGAACTTAGAAGTAGAGTATTTGGTTAGAAACAGAGGGGA
TGTTTCTTTTTCCCTTTTTTTTTTTTTTTTTTTTAATTAATGATCAGAAAAATTCAGCTTTTGAATTTTTTTACCATGAGGCTGGTTTTATAATAT
Protein sequenceShow/hide protein sequence
MASKGGRTRRVRNPTTKLKKKNKKKMIISNKNQGRRIISSKIEEEIEASSCSAMAANIESSSASSSDFEECCTPKADRFRIPEIQICPPAPKKQRLFPNCSLQKTSPIAF
FASPDIELFFFFSQSH