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Sed0006796 (gene) of Chayote v1 genome

Gene IDSed0006796
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG04:44162618..44162986
RNA-Seq ExpressionSed0006796
SyntenySed0006796
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061659.1 hypothetical protein E6C27_scaffold212G00280 [Cucumis melo var. makuwa]3.8e-2050.81Show/hide
Query:  LPFVCVVAIFICLIFIKIADADSNQDH-GIHAVGHASEPFCPGGYSDRGDHCQHIRHVSTLGYNDGD------FDDKFEVKGKATMFLSTSESTMAAEQL
        L FVCV+AI +     K+ADADS  DH GIHAVGHA EPFCPGGYSDRGDHCQH+  +S++ YN+ D      FDD+++V GK ++ +S       AE  
Subjt:  LPFVCVVAIFICLIFIKIADADSNQDH-GIHAVGHASEPFCPGGYSDRGDHCQHIRHVSTLGYNDGD------FDDKFEVKGKATMFLSTSESTMAAEQL

Query:  AESLD--NVEP-QQIMDRVVVLGH
        A+ L+   + P QQ+ + V+VLGH
Subjt:  AESLD--NVEP-QQIMDRVVVLGH

KAE8647343.1 hypothetical protein Csa_003811 [Cucumis sativus]5.9e-2154.46Show/hide
Query:  GLPFVCVVAIFICLIFIKIADADSNQDH-GIHAVGHASEPFCPGGYSDRGDHCQHIRHVSTLGYNDGDFDDKFEVKGKATMFLSTSESTMAAEQLAESLD
        GL FVCV+AI IC    K+ADAD+  DH GIHAVGHA EPFCPGGYSDRGDHCQH+  +S++ YN+ D DD+F+   K    LS S S  AAE  A+ L+
Subjt:  GLPFVCVVAIFICLIFIKIADADSNQDH-GIHAVGHASEPFCPGGYSDRGDHCQHIRHVSTLGYNDGDFDDKFEVKGKATMFLSTSESTMAAEQLAESLD

Query:  NVEPQQIMDRVV
            +   D++V
Subjt:  NVEPQQIMDRVV

KAG6572424.1 hypothetical protein SDJN03_29152, partial [Cucurbita argyrosperma subsp. sororia]2.8e-2353.39Show/hide
Query:  VCVVAIFICLIFIKIADADSNQDHGIHAVGHASEPFCPGGYSDRGDHCQHIRHVSTLGY----NDGDFDDKFEVKGKATMFLSTSESTMAAEQLAE--SL
        +C +AIFI L+FIK+A AD +   GIHA+GHA EPFCPGGYSDRGDHC HI  ++++ Y    +D DFDD ++V GK +M +S SEST  AE+ A    L
Subjt:  VCVVAIFICLIFIKIADADSNQDHGIHAVGHASEPFCPGGYSDRGDHCQHIRHVSTLGY----NDGDFDDKFEVKGKATMFLSTSESTMAAEQLAE--SL

Query:  DNVEP-QQIMDRVVVLGH
        +++ P +Q+ D+V VLGH
Subjt:  DNVEP-QQIMDRVVVLGH

KAG6589281.1 hypothetical protein SDJN03_17846, partial [Cucurbita argyrosperma subsp. sororia]8.0e-1042.86Show/hide
Query:  GLPFVCVVAIFICLIFIKIADADSNQDHGIHAVGHASEPFCPGGYSDRGDHCQHI-RHVSTLGYNDGDFDDKFEVKGKATMFLSTSESTMAAEQLA--ES
        GL F+ +VAIFICL+FI++ADA     H  H+  HA E  CPGG    G+HC H  R  +     D DFDD ++   K  M +S SEST  AE+ A    
Subjt:  GLPFVCVVAIFICLIFIKIADADSNQDHGIHAVGHASEPFCPGGYSDRGDHCQHI-RHVSTLGYNDGDFDDKFEVKGKATMFLSTSESTMAAEQLA--ES

Query:  LDNVEPQQ-IMDRVVVLGH
        ++   P++    +VVVLGH
Subjt:  LDNVEPQQ-IMDRVVVLGH

TrEMBL top hitse value%identityAlignment
A0A0A0KE60 Uncharacterized protein2.9e-2152.94Show/hide
Query:  GLPFVCVVAIFICLIFIKIADADSNQDH-GIHAVGHASEPFCPGGYSDRGDHCQHIRHVSTLGYNDGDFDDKFEVKGKATMFLSTSESTMAAEQLAESLD
        GL FVCV+AI IC    K+ADAD+  DH GIHAVGHA EPFCPGGYSDRGDHCQH+  +S++ YN+ D DD+F+   K    LS S S  AAE  A+ L+
Subjt:  GLPFVCVVAIFICLIFIKIADADSNQDH-GIHAVGHASEPFCPGGYSDRGDHCQHIRHVSTLGYNDGDFDDKFEVKGKATMFLSTSESTMAAEQLAESLD

Query:  ---NVEPQQIMDRVVVLGH
                ++  + +VLGH
Subjt:  ---NVEPQQIMDRVVVLGH

A0A5A7V7L4 Uncharacterized protein1.9e-2050.81Show/hide
Query:  LPFVCVVAIFICLIFIKIADADSNQDH-GIHAVGHASEPFCPGGYSDRGDHCQHIRHVSTLGYNDGD------FDDKFEVKGKATMFLSTSESTMAAEQL
        L FVCV+AI +     K+ADADS  DH GIHAVGHA EPFCPGGYSDRGDHCQH+  +S++ YN+ D      FDD+++V GK ++ +S       AE  
Subjt:  LPFVCVVAIFICLIFIKIADADSNQDH-GIHAVGHASEPFCPGGYSDRGDHCQHIRHVSTLGYNDGD------FDDKFEVKGKATMFLSTSESTMAAEQL

Query:  AESLD--NVEP-QQIMDRVVVLGH
        A+ L+   + P QQ+ + V+VLGH
Subjt:  AESLD--NVEP-QQIMDRVVVLGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACAAGAATTTGGACAGGGCTGCCATTTGTGTGCGTTGTGGCCATCTTCATTTGCCTAATTTTCATCAAAATTGCCGACGCGGATTCCAACCAGGACCACGGCAT
CCACGCTGTCGGCCACGCCAGCGAGCCGTTCTGCCCCGGTGGCTACTCTGACAGAGGGGACCACTGCCAGCACATCCGCCACGTCAGCACACTAGGCTATAATGACGGCG
ATTTTGATGACAAGTTTGAAGTGAAGGGCAAGGCTACGATGTTCTTGTCCACGTCGGAATCCACCATGGCCGCCGAACAGCTGGCCGAGAGTTTGGACAACGTTGAACCC
CAACAGATTATGGATAGAGTCGTTGTCTTGGGGCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTACAAGAATTTGGACAGGGCTGCCATTTGTGTGCGTTGTGGCCATCTTCATTTGCCTAATTTTCATCAAAATTGCCGACGCGGATTCCAACCAGGACCACGGCAT
CCACGCTGTCGGCCACGCCAGCGAGCCGTTCTGCCCCGGTGGCTACTCTGACAGAGGGGACCACTGCCAGCACATCCGCCACGTCAGCACACTAGGCTATAATGACGGCG
ATTTTGATGACAAGTTTGAAGTGAAGGGCAAGGCTACGATGTTCTTGTCCACGTCGGAATCCACCATGGCCGCCGAACAGCTGGCCGAGAGTTTGGACAACGTTGAACCC
CAACAGATTATGGATAGAGTCGTTGTCTTGGGGCATTGA
Protein sequenceShow/hide protein sequence
MATRIWTGLPFVCVVAIFICLIFIKIADADSNQDHGIHAVGHASEPFCPGGYSDRGDHCQHIRHVSTLGYNDGDFDDKFEVKGKATMFLSTSESTMAAEQLAESLDNVEP
QQIMDRVVVLGH