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Sed0006815 (gene) of Chayote v1 genome

Gene IDSed0006815
OrganismSechium edule (Chayote v1)
DescriptionAconitate hydratase
Genome locationLG07:8429239..8430686
RNA-Seq ExpressionSed0006815
SyntenySed0006815
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044639.1 Aconitate hydratase [Cucumis melo var. makuwa]1.8e-1063.93Show/hide
Query:  MATGRLIHNTLPYVDIEKIDMNGKNTIGSKLLSSARPRGGNYINNP-AAKKAAVRATDYRP
        MATGRLI++T  + D E ++M+GKN  GS+LLS+A PRGGNYINNP AA+KAAVR + Y+P
Subjt:  MATGRLIHNTLPYVDIEKIDMNGKNTIGSKLLSSARPRGGNYINNP-AAKKAAVRATDYRP

KAG6600180.1 hypothetical protein SDJN03_05413, partial [Cucurbita argyrosperma subsp. sororia]1.7e-1358.02Show/hide
Query:  MGLKKEFIFLSVMVFFLFHMATGRLIH-NTLPYVDIEKIDMNGKNTIGSKLLSSARPRGGNYINNP-AAKKAAVRATDYRP
        MGLK+  I LSVMV  L HMATGR +   TLP  D E ++M+G+   G++LLSSARPRGGNYI+NP AA KAA++ + Y P
Subjt:  MGLKKEFIFLSVMVFFLFHMATGRLIH-NTLPYVDIEKIDMNGKNTIGSKLLSSARPRGGNYINNP-AAKKAAVRATDYRP

KGN53132.1 hypothetical protein Csa_014795 [Cucumis sativus]7.2e-1258.54Show/hide
Query:  MGLKKEFIFLSVMVFFLF-HMATGR-LIHNTLPYVDIEKIDMNGKNTIGSKLLSSARPRGGNYINNP-AAKKAAVRATDYRP
        MGLK+E IF SVM+  L  +MATGR L H+T  + D E ++M+GKN  GS+ LSSA PRGGNYIN P AA+KAAV    Y+P
Subjt:  MGLKKEFIFLSVMVFFLF-HMATGR-LIHNTLPYVDIEKIDMNGKNTIGSKLLSSARPRGGNYINNP-AAKKAAVRATDYRP

TrEMBL top hitse value%identityAlignment
A0A0A0KXI8 Aconitate hydratase3.5e-1258.54Show/hide
Query:  MGLKKEFIFLSVMVFFLF-HMATGR-LIHNTLPYVDIEKIDMNGKNTIGSKLLSSARPRGGNYINNP-AAKKAAVRATDYRP
        MGLK+E IF SVM+  L  +MATGR L H+T  + D E ++M+GKN  GS+ LSSA PRGGNYIN P AA+KAAV    Y+P
Subjt:  MGLKKEFIFLSVMVFFLF-HMATGR-LIHNTLPYVDIEKIDMNGKNTIGSKLLSSARPRGGNYINNP-AAKKAAVRATDYRP

A0A5A7TTS9 Aconitate hydratase8.6e-1163.93Show/hide
Query:  MATGRLIHNTLPYVDIEKIDMNGKNTIGSKLLSSARPRGGNYINNP-AAKKAAVRATDYRP
        MATGRLI++T  + D E ++M+GKN  GS+LLS+A PRGGNYINNP AA+KAAVR + Y+P
Subjt:  MATGRLIHNTLPYVDIEKIDMNGKNTIGSKLLSSARPRGGNYINNP-AAKKAAVRATDYRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTAAAGAAAGAGTTCATATTTTTAAGTGTTATGGTTTTTTTTCTTTTCCATATGGCAACAGGGAGACTCATCCACAATACTTTACCTTATGTAGACATTGAGAA
GATTGATATGAATGGAAAAAATACAATTGGAAGCAAACTTTTGAGCTCGGCCCGACCTAGAGGGGGCAACTATATTAACAACCCAGCAGCGAAGAAGGCTGCTGTTCGAG
CCACCGACTACCGGCCATAA
mRNA sequenceShow/hide mRNA sequence
ATTCATAACTCTCAAATAGGATGCAAGTTGGTTTGATCCTCTATATATACCCACAAAACCAAGCCATAGAGTTCATCCCCAAAGATAGAAGAAGTAGAAAATAGAAGAAT
GGGTTTAAAGAAAGAGTTCATATTTTTAAGTGTTATGGTTTTTTTTCTTTTCCATATGGCAACAGGGAGACTCATCCACAATACTTTACCTTATGTAGACATTGAGAAGA
TTGATATGAATGGAAAAAATACAATTGGAAGCAAACTTTTGAGCTCGGCCCGACCTAGAGGGGGCAACTATATTAACAACCCAGCAGCGAAGAAGGCTGCTGTTCGAGCC
ACCGACTACCGGCCATAACTGCCGTGAAAACTAGTATATCTAATTTCCTGGAAATTTCAATGTAACTGGTCATATTTGTGGCTGAGGATTATGAATAATAAACTACGTAT
TTGAAGTTAACCTTCTTTGTTTTATTGGTAATGCAACCGATTGTTCAATATCGGAAAGAGAGGGAAGAAATTAAGGATTTAAATTGAATGGCAACCACTTTCGTTGGTAT
GAAATTATTTTTTGAAAATTTATGTCCAAAATAAATAATATCTTCCAATGGGATACGC
Protein sequenceShow/hide protein sequence
MGLKKEFIFLSVMVFFLFHMATGRLIHNTLPYVDIEKIDMNGKNTIGSKLLSSARPRGGNYINNPAAKKAAVRATDYRP