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Sed0006817 (gene) of Chayote v1 genome

Gene IDSed0006817
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG08:4275447..4276158
RNA-Seq ExpressionSed0006817
SyntenySed0006817
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY31322.1 Uncharacterized protein TCM_038276 [Theobroma cacao]1.2e-1656.04Show/hide
Query:  ADAFFRSVSHGCIAGCDAGIDRRPYHKNCGCALHDRD-SNAKRCSAHKSVVSYPIRRAWSEGCLASVAGSGSGSAVSSPSSSEIETFGSNR
        AD  FRS+  GCIAGCD GI+RRPYH+NC CALHD+   N          VSYPIRRAWSEGCLA  A S   S  SSP+ S +   G +R
Subjt:  ADAFFRSVSHGCIAGCDAGIDRRPYHKNCGCALHDRD-SNAKRCSAHKSVVSYPIRRAWSEGCLASVAGSGSGSAVSSPSSSEIETFGSNR

KAE8653037.1 hypothetical protein Csa_019637 [Cucumis sativus]5.6e-1965.96Show/hide
Query:  MADAFFRSVSHGCIAGCDAGIDRRPYHKNCGCALHDRDSNAKRC----SAHKSVVSYPIRRAWSEGCLASVAGSGSGSAVSSPSSSEIETFGSN
        MADA  R V +GCI   DA IDRRPYHKNC CALHDRD+  KRC    S HKS VSYPIRRAWSEGCLA VA SG  S+ SSPS  +IE  G +
Subjt:  MADAFFRSVSHGCIAGCDAGIDRRPYHKNCGCALHDRDSNAKRC----SAHKSVVSYPIRRAWSEGCLASVAGSGSGSAVSSPSSSEIETFGSN

KAG6587850.1 hypothetical protein SDJN03_16415, partial [Cucurbita argyrosperma subsp. sororia]1.7e-2370.41Show/hide
Query:  MADAFFRSVSHGCIAGCDAGIDRRPYHKNCGCALHDRDSNAKRCS---AHKSVVSYPIRRAWSEGCLASVAGSGSGSAVSSPSSS---EIETFGSNRR
        MADA F SV HGCIA CDA I RRPYHKNCGCALHDRD+  +RCS   +  S VSYPIRRAWSEGCLA  A SGSG  +SSPSSS   E E  GSNRR
Subjt:  MADAFFRSVSHGCIAGCDAGIDRRPYHKNCGCALHDRDSNAKRCS---AHKSVVSYPIRRAWSEGCLASVAGSGSGSAVSSPSSS---EIETFGSNRR

XP_007013703.2 PREDICTED: uncharacterized protein LOC18588916 [Theobroma cacao]1.2e-1656.04Show/hide
Query:  ADAFFRSVSHGCIAGCDAGIDRRPYHKNCGCALHDRD-SNAKRCSAHKSVVSYPIRRAWSEGCLASVAGSGSGSAVSSPSSSEIETFGSNR
        AD  FRS+  GCIAGCD GI+RRPYH+NC CALHD+   N          VSYPIRRAWSEGCLA  A S   S  SSP+ S +   G +R
Subjt:  ADAFFRSVSHGCIAGCDAGIDRRPYHKNCGCALHDRD-SNAKRCSAHKSVVSYPIRRAWSEGCLASVAGSGSGSAVSSPSSSEIETFGSNR

XP_008443899.1 PREDICTED: uncharacterized protein LOC103487382 [Cucumis melo]8.4e-2367.35Show/hide
Query:  MADAFFRSVSHGCIAGCDAGIDRRPYHKNCGCALHDRDSNAKRC----SAHKSVVSYPIRRAWSEGCLASVAGSGSG--SAVSSPSSSEIETFGSNRR
        MADAF R V HGCIAG DAGIDRRPYHKNC CALHDRD+  +RC    S HKS VSYPIRRAWSEGCLA VA S +   S+ SSPS  ++E+ GS +R
Subjt:  MADAFFRSVSHGCIAGCDAGIDRRPYHKNCGCALHDRDSNAKRC----SAHKSVVSYPIRRAWSEGCLASVAGSGSG--SAVSSPSSSEIETFGSNRR

TrEMBL top hitse value%identityAlignment
A0A061GQ94 Uncharacterized protein5.7e-1756.04Show/hide
Query:  ADAFFRSVSHGCIAGCDAGIDRRPYHKNCGCALHDRD-SNAKRCSAHKSVVSYPIRRAWSEGCLASVAGSGSGSAVSSPSSSEIETFGSNR
        AD  FRS+  GCIAGCD GI+RRPYH+NC CALHD+   N          VSYPIRRAWSEGCLA  A S   S  SSP+ S +   G +R
Subjt:  ADAFFRSVSHGCIAGCDAGIDRRPYHKNCGCALHDRD-SNAKRCSAHKSVVSYPIRRAWSEGCLASVAGSGSGSAVSSPSSSEIETFGSNR

A0A0A0LWK0 Uncharacterized protein1.4e-2065.62Show/hide
Query:  MADAFFRSVSHGCIAGCDAGIDRRPYHKNCGCALHDRDSNAKRC----SAHKSVVSYPIRRAWSEGCLASVAGSGSGSAVSSPSSSEIETFGSNRR
        MADA  R V +GCI   DA IDRRPYHKNC CALHDRD+  KRC    S HKS VSYPIRRAWSEGCLA VA SG  S+ SSPS  ++E+ GS +R
Subjt:  MADAFFRSVSHGCIAGCDAGIDRRPYHKNCGCALHDRDSNAKRC----SAHKSVVSYPIRRAWSEGCLASVAGSGSGSAVSSPSSSEIETFGSNRR

A0A1S3B9X6 uncharacterized protein LOC1034873824.1e-2367.35Show/hide
Query:  MADAFFRSVSHGCIAGCDAGIDRRPYHKNCGCALHDRDSNAKRC----SAHKSVVSYPIRRAWSEGCLASVAGSGSG--SAVSSPSSSEIETFGSNRR
        MADAF R V HGCIAG DAGIDRRPYHKNC CALHDRD+  +RC    S HKS VSYPIRRAWSEGCLA VA S +   S+ SSPS  ++E+ GS +R
Subjt:  MADAFFRSVSHGCIAGCDAGIDRRPYHKNCGCALHDRDSNAKRC----SAHKSVVSYPIRRAWSEGCLASVAGSGSG--SAVSSPSSSEIETFGSNRR

A0A5C7HXC5 Uncharacterized protein2.2e-1659.09Show/hide
Query:  MESMADAFFRSVSHGCIAGCDAGIDRRPYHKNCGCALHDRDSNAK-RCSAHK--SVVSYPIRRAWSEGCLASVAGSGSGSAVSSPSSS
        M + AD FFR+V  GCI+GCD+GI+RRPYH+NC CALH + +N K R + HK    VSYP+RRAWSEG L  +A + S S  SSPSSS
Subjt:  MESMADAFFRSVSHGCIAGCDAGIDRRPYHKNCGCALHDRDSNAK-RCSAHK--SVVSYPIRRAWSEGCLASVAGSGSGSAVSSPSSS

W9SB18 Uncharacterized protein1.6e-1656.25Show/hide
Query:  ADAFFRSVSHGCIAGCDAGIDRRPYHKNCGCALHDRDSNAKRCSAH----KSVVSYPIRRAWSEGCLASVAGSG-SGSAVSSPSSSEIETFGSNRR
        AD  F+ V  GCIAGCD  IDRRPYH+NC CALH   S    CS+H       VSYPIR++WSEGCLA  A +G +GSA SSPSSS     G   R
Subjt:  ADAFFRSVSHGCIAGCDAGIDRRPYHKNCGCALHDRDSNAKRCSAH----KSVVSYPIRRAWSEGCLASVAGSG-SGSAVSSPSSSEIETFGSNRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G46490.1 unknown protein1.1e-1544.23Show/hide
Query:  ADAFFRSVSHGCIAGCDAGIDRRPYHKNCGCALHDRDSNAKR---------CSAHKS--VVSYPIRRAWSEGCLASV----AGSGSGSAVSSPSSSEIET
        AD  FRS+  GCI+G D+ I+RRPYHKNCGCALHD+ S A +         C  H S   +S+PIRR+WSEG + ++    + S S +  S  SSS +  
Subjt:  ADAFFRSVSHGCIAGCDAGIDRRPYHKNCGCALHDRDSNAKR---------CSAHKS--VVSYPIRRAWSEGCLASV----AGSGSGSAVSSPSSSEIET

Query:  FGSN
          S+
Subjt:  FGSN

AT5G35110.1 unknown protein5.2e-1547.87Show/hide
Query:  DAFFRSVSHGCIAGCDAGIDRRPYHKNCGCALHDRD---SNAKRCSAHKS-VVSYPIRRAWSEG---CLASVAGSGSGSAVSSPSSSEIETFGS
        D  FR++  GCI+ CD+ I RRPYHKNCGCALH+R     +A  C   +S VV +PI+R+WSEG    L   + S S +  S  SSS I T  S
Subjt:  DAFFRSVSHGCIAGCDAGIDRRPYHKNCGCALHDRD---SNAKRCSAHKS-VVSYPIRRAWSEG---CLASVAGSGSGSAVSSPSSSEIETFGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAATCCATGGCGGACGCCTTCTTCCGATCCGTCTCCCACGGCTGCATCGCCGGCTGCGACGCCGGCATCGACCGCCGCCCCTACCACAAGAACTGCGGCTGCGCTCT
TCACGACCGCGACAGCAACGCCAAACGCTGCTCCGCCCACAAATCTGTCGTCTCCTATCCCATTCGCCGCGCTTGGAGCGAAGGCTGCTTGGCTTCCGTCGCCGGATCTG
GATCTGGATCTGCCGTTTCTTCTCCTTCTTCTTCTGAGATTGAAACCTTTGGATCTAACCGGCGATGA
mRNA sequenceShow/hide mRNA sequence
TACAGCGAAAAAGGCCATGGAATCCCACATCGCTTAATTTGCCGCTTTTCCATTTAGCAACAACTGTCTTCTTCCCAACTCCAGGTTTCCCCTATATAAACCCCCCTTCT
CCTCTCAATCCCCCTCAACGAGATGGAATCCATGGCGGACGCCTTCTTCCGATCCGTCTCCCACGGCTGCATCGCCGGCTGCGACGCCGGCATCGACCGCCGCCCCTACC
ACAAGAACTGCGGCTGCGCTCTTCACGACCGCGACAGCAACGCCAAACGCTGCTCCGCCCACAAATCTGTCGTCTCCTATCCCATTCGCCGCGCTTGGAGCGAAGGCTGC
TTGGCTTCCGTCGCCGGATCTGGATCTGGATCTGCCGTTTCTTCTCCTTCTTCTTCTGAGATTGAAACCTTTGGATCTAACCGGCGATGATTTTTGTTCTTGGTCTGTAA
TATATTCTCTGAAATTCTTTTCATATATTCTCTGAAATTCTTTTTAGTTAGTCCAATTCTGTTAGATCTATGCGAAATTGGAGTGTGTGTGTGTTTGTACATTTTCTCGA
CTGTTCTTCTCATCTCTCTTGATTCACTTGGACGTGCTCTGTATTTTGGAGATTCCCTCTTTTCATTACAAATTGAGGACAAAGTTATCCAAAAACACAACTATTTTCTT
TGTAGTTATTCATTTTTAGTTTTTAAAAATAAAAATGGTGTATGTTTTATAA
Protein sequenceShow/hide protein sequence
MESMADAFFRSVSHGCIAGCDAGIDRRPYHKNCGCALHDRDSNAKRCSAHKSVVSYPIRRAWSEGCLASVAGSGSGSAVSSPSSSEIETFGSNRR