CuGenDBv2

Gene ID	Sed0006827
Organism	Sechium edule (Chayote v1)
Description	Exo-poly-alpha-D-galacturonosidase
Genome location	LG12:8855756..8861119
RNA-Seq Expression	Sed0006827
Synteny	Sed0006827
Gene Ontology terms	GO:0005975 - carbohydrate metabolic process (biological process) GO:0004650 - polygalacturonase activity (molecular function)
InterPro domains	IPR000743 - Glycoside hydrolase, family 28 IPR006626 - Parallel beta-helix repeat IPR011050 - Pectin lyase fold/virulence factor IPR012334 - Pectin lyase fold

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6596223.1 Transcription factor basic helix-loop-helix 60, partial [Cucurbita argyrosperma subsp. sororia]

4.1e-97

70.55

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Query:  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSH
        LHLVRCENT+IEDVSIYGDF+TPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTAT+CWI TKSSAIKLGSASWFNFTR+LFDNITIVDSH
Subjt:  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSH

Query:  RGLGFQL------------------------------------MAVNPGSKEGSISN---INITATSENGVFLSGSKSGVLSNLRFTNVKLSYKRWTKYG
        RGLGFQL                                       +PGSKEGSISN   INITATSENGVFLSGSKSGVLSNLRF NVKL+YKRWTKYG
Subjt:  RGLGFQL------------------------------------MAVNPGSKEGSISN---INITATSENGVFLSGSKSGVLSNLRFTNVKLSYKRWTKYG

Query:  GGLADYRPGCQGF-----------HIEGLSFENVDMKWS---DNVSLQWNNPMD-------------FHSGYLRE
        GG+ADYRPGCQGF           HIEGLSFENVDMKWS   D+ SLQWNNP+D             FHSGYLRE
Subjt:  GGLADYRPGCQGF-----------HIEGLSFENVDMKWS---DNVSLQWNNPMD-------------FHSGYLRE

KAG7027765.1 Exo-poly-alpha-D-galacturonosidase, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.2e-97

70.8

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Query:  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSH
        LHLVRCENT+IEDVSIYGDF+TPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTAT+CWI TKSSAIKLGSASWFNFTR+LFDNITIVDSH
Subjt:  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSH

Query:  RGLGFQL------------------------------------MAVNPGSKEGSISN---INITATSENGVFLSGSKSGVLSNLRFTNVKLSYKRWTKYG
        RGLGFQL                                       +PGSKEGSISN   INITATSENGVFLSGSKSGVLSNLRF NVKL+YKRWTKYG
Subjt:  RGLGFQL------------------------------------MAVNPGSKEGSISN---INITATSENGVFLSGSKSGVLSNLRFTNVKLSYKRWTKYG

Query:  GGLADYRPGCQGF-----------HIEGLSFENVDMKWS--DNVSLQWNNPMD-------------FHSGYLRE
        GG+ADYRPGCQGF           HIEGLSFENVDMKWS  D+ SLQWNNP+D             FHSGYLRE
Subjt:  GGLADYRPGCQGF-----------HIEGLSFENVDMKWS--DNVSLQWNNPMD-------------FHSGYLRE

XP_022931747.1 uncharacterized protein LOC111437911 [Cucurbita moschata]

3.2e-97

70.8

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Query:  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSH
        LHLVRCENT+IEDVSIYGDF+TPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTAT+CWI TKSSAIKLGSASWFNFTR+LFDNITIVDSH
Subjt:  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSH

Query:  RGLGFQL------------------------------------MAVNPGSKEGSISN---INITATSENGVFLSGSKSGVLSNLRFTNVKLSYKRWTKYG
        RGLGFQL                                       +PGSKEGSISN   INITATSENGVFLSGSKSGVLSNLRF NVKL+YKRWTKYG
Subjt:  RGLGFQL------------------------------------MAVNPGSKEGSISN---INITATSENGVFLSGSKSGVLSNLRFTNVKLSYKRWTKYG

Query:  GGLADYRPGCQGF-----------HIEGLSFENVDMKWS--DNVSLQWNNPMD-------------FHSGYLRE
        GG+ADYRPGCQGF           HIEGLSFENVDMKWS  D+ SLQWNNP+D             FHSGYLRE
Subjt:  GGLADYRPGCQGF-----------HIEGLSFENVDMKWS--DNVSLQWNNPMD-------------FHSGYLRE

XP_022971216.1 uncharacterized protein LOC111470006 [Cucurbita maxima]

6.0e-96

70.07

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Query:  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSH
        LHLV CENT+IEDVSIYGDF+TPNNDGIDIEDSNNTFITRCRIDTGDDAICPK SNGPVFNLTAT+CWI TKSSAIKLGSASWFNFTR+LFDNITIVDSH
Subjt:  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSH

Query:  RGLGFQL------------------------------------MAVNPGSKEGSISN---INITATSENGVFLSGSKSGVLSNLRFTNVKLSYKRWTKYG
        RGLGFQL                                       +PGSKEGSISN   INITATSENGVFLSGSKSGVLSNLRF NVKL+YKRWTKYG
Subjt:  RGLGFQL------------------------------------MAVNPGSKEGSISN---INITATSENGVFLSGSKSGVLSNLRFTNVKLSYKRWTKYG

Query:  GGLADYRPGCQGF-----------HIEGLSFENVDMKWS--DNVSLQWNNPMD-------------FHSGYLRE
        GG+ADYRPGCQGF           HIEGLSFENVDMKWS  D+ SLQWNNP+D             FHSGYLRE
Subjt:  GGLADYRPGCQGF-----------HIEGLSFENVDMKWS--DNVSLQWNNPMD-------------FHSGYLRE

XP_023538800.1 uncharacterized protein LOC111799618 [Cucurbita pepo subsp. pepo]

2.4e-97

71.53

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Query:  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSH
        LHLVRCENT+IEDVSIYGDF+TPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTAT+CWI TKSSAIKLGSASWFNFTR+LFDNITIVDSH
Subjt:  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSH

Query:  RGLGFQL-------------MAV-----------------------NPGSKEGSISN---INITATSENGVFLSGSKSGVLSNLRFTNVKLSYKRWTKYG
        RGLGFQL             M V                       +PGSKEGSISN   INITATSENGVFLSGSKSGVLSNLRF NVKL+YKRWTKYG
Subjt:  RGLGFQL-------------MAV-----------------------NPGSKEGSISN---INITATSENGVFLSGSKSGVLSNLRFTNVKLSYKRWTKYG

Query:  GGLADYRPGCQGF-----------HIEGLSFENVDMKWS--DNVSLQWNNPMD-------------FHSGYLRE
        GG+ADYRPGCQGF           HIEGLSFENVDMKWS  D+ SLQWNNP+D             FHSGYLRE
Subjt:  GGLADYRPGCQGF-----------HIEGLSFENVDMKWS--DNVSLQWNNPMD-------------FHSGYLRE

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B7Z6 exo-poly-alpha-D-galacturonosidase

1.8e-93

69.63

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Query:  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSH
        LHLVRCENTVIEDVSIYGDF+TPNNDGIDIEDSNNT ITRCRIDTGDDAICPK+SNGPVFNLTAT+CWI TKSSAIKLGSASWFNFTR+LFDNITIVDSH
Subjt:  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSH

Query:  RGLGFQL------------------------------------MAVNPGSKEGSISN---INITATSENGVFLSGSKSGVLSNLRFTNVKLSYKRWTKYG
        RGLGFQL                                       +PGSKEGSISN   INITATSENGVFLSGSKSGVLSNLRFTNVKL YKRWTKYG
Subjt:  RGLGFQL------------------------------------MAVNPGSKEGSISN---INITATSENGVFLSGSKSGVLSNLRFTNVKLSYKRWTKYG

Query:  GGLADYRPGCQGF-----------HIEGLSFENVDMKWSD-NVSLQWNNPMD-------------FHSGY
        GG+ADYRPGCQGF           HIEGL+ ENVDM WSD + SLQWNNP+D             FHSGY
Subjt:  GGLADYRPGCQGF-----------HIEGLSFENVDMKWSD-NVSLQWNNPMD-------------FHSGY

A0A5A7TLI5 Exo-poly-alpha-D-galacturonosidase

4.6e-94

69.49

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Query:  HRLHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVD
        H LHLVRCENTVIEDVSIYGDF+TPNNDGIDIEDSNNT ITRCRIDTGDDAICPK+SNGPVFNLTAT+CWI TKSSAIKLGSASWFNFTR+LFDNITIVD
Subjt:  HRLHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVD

Query:  SHRGLGFQL------------------------------------MAVNPGSKEGSISN---INITATSENGVFLSGSKSGVLSNLRFTNVKLSYKRWTK
        SHRGLGFQL                                       +PGSKEGSISN   INITATSENGVFLSGSKSGVLSNLRFTNVKL YKRWTK
Subjt:  SHRGLGFQL------------------------------------MAVNPGSKEGSISN---INITATSENGVFLSGSKSGVLSNLRFTNVKLSYKRWTK

Query:  YGGGLADYRPGCQGF-----------HIEGLSFENVDMKWSD-NVSLQWNNPMD-------------FHSGY
        YGGG+ADYRPGCQGF           HIEGL+ ENVDM WSD + SLQWNNP+D             FHSGY
Subjt:  YGGGLADYRPGCQGF-----------HIEGLSFENVDMKWSD-NVSLQWNNPMD-------------FHSGY

A0A5D3DP49 Exo-poly-alpha-D-galacturonosidase

1.8e-93

69.63

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Query:  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSH
        LHLVRCENTVIEDVSIYGDF+TPNNDGIDIEDSNNT ITRCRIDTGDDAICPK+SNGPVFNLTAT+CWI TKSSAIKLGSASWFNFTR+LFDNITIVDSH
Subjt:  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSH

Query:  RGLGFQL------------------------------------MAVNPGSKEGSISN---INITATSENGVFLSGSKSGVLSNLRFTNVKLSYKRWTKYG
        RGLGFQL                                       +PGSKEGSISN   INITATSENGVFLSGSKSGVLSNLRFTNVKL YKRWTKYG
Subjt:  RGLGFQL------------------------------------MAVNPGSKEGSISN---INITATSENGVFLSGSKSGVLSNLRFTNVKLSYKRWTKYG

Query:  GGLADYRPGCQGF-----------HIEGLSFENVDMKWSD-NVSLQWNNPMD-------------FHSGY
        GG+ADYRPGCQGF           HIEGL+ ENVDM WSD + SLQWNNP+D             FHSGY
Subjt:  GGLADYRPGCQGF-----------HIEGLSFENVDMKWSD-NVSLQWNNPMD-------------FHSGY

A0A6J1EUK0 uncharacterized protein LOC111437911

1.5e-97

70.8

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Query:  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSH
        LHLVRCENT+IEDVSIYGDF+TPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTAT+CWI TKSSAIKLGSASWFNFTR+LFDNITIVDSH
Subjt:  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSH

Query:  RGLGFQL------------------------------------MAVNPGSKEGSISN---INITATSENGVFLSGSKSGVLSNLRFTNVKLSYKRWTKYG
        RGLGFQL                                       +PGSKEGSISN   INITATSENGVFLSGSKSGVLSNLRF NVKL+YKRWTKYG
Subjt:  RGLGFQL------------------------------------MAVNPGSKEGSISN---INITATSENGVFLSGSKSGVLSNLRFTNVKLSYKRWTKYG

Query:  GGLADYRPGCQGF-----------HIEGLSFENVDMKWS--DNVSLQWNNPMD-------------FHSGYLRE
        GG+ADYRPGCQGF           HIEGLSFENVDMKWS  D+ SLQWNNP+D             FHSGYLRE
Subjt:  GGLADYRPGCQGF-----------HIEGLSFENVDMKWS--DNVSLQWNNPMD-------------FHSGYLRE

A0A6J1I2Q7 uncharacterized protein LOC111470006

2.9e-96

70.07

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Query:  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSH
        LHLV CENT+IEDVSIYGDF+TPNNDGIDIEDSNNTFITRCRIDTGDDAICPK SNGPVFNLTAT+CWI TKSSAIKLGSASWFNFTR+LFDNITIVDSH
Subjt:  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSH

Query:  RGLGFQL------------------------------------MAVNPGSKEGSISN---INITATSENGVFLSGSKSGVLSNLRFTNVKLSYKRWTKYG
        RGLGFQL                                       +PGSKEGSISN   INITATSENGVFLSGSKSGVLSNLRF NVKL+YKRWTKYG
Subjt:  RGLGFQL------------------------------------MAVNPGSKEGSISN---INITATSENGVFLSGSKSGVLSNLRFTNVKLSYKRWTKYG

Query:  GGLADYRPGCQGF-----------HIEGLSFENVDMKWS--DNVSLQWNNPMD-------------FHSGYLRE
        GG+ADYRPGCQGF           HIEGLSFENVDMKWS  D+ SLQWNNP+D             FHSGYLRE
Subjt:  GGLADYRPGCQGF-----------HIEGLSFENVDMKWS--DNVSLQWNNPMD-------------FHSGYLRE

SwissProt top hits

e value

%identity

Alignment

O22818 Probable polygalacturonase At2g43860

7.3e-04

36.9

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Query:  RLHLV--RCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATDCWIGTKSSAIKLGSA
        + H+V     N  I+ V +  D N+PN DGI +E S++  IT  RI TGDD I     +  VF +    C  G   S   LG A
Subjt:  RLHLV--RCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATDCWIGTKSSAIKLGSA

P26216 Exopolygalacturonase

9.5e-04

35.8

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Query:  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAIC--PKTSNGPVFNLTATDCWIGTKSSAIKLG
        +++ RC++ +I+DV++    ++PN DGI + DS+   IT   I  GDD I   P TS     N+T   C  G   S   LG
Subjt:  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAIC--PKTSNGPVFNLTATDCWIGTKSSAIKLG

P35338 Exopolygalacturonase

7.3e-04

35.8

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Query:  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAIC--PKTSNGPVFNLTATDCWIGTKSSAIKLG
        +++ +C+N +I+DV++    ++PN DGI + DS+   IT   I  GDD I   P TS     N+T   C  G   S   LG
Subjt:  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAIC--PKTSNGPVFNLTATDCWIGTKSSAIKLG

Arabidopsis top hits

e value

%identity

Alignment

AT2G43860.1 Pectin lyase-like superfamily protein

5.2e-05

36.9

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Query:  RLHLV--RCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATDCWIGTKSSAIKLGSA
        + H+V     N  I+ V +  D N+PN DGI +E S++  IT  RI TGDD I     +  VF +    C  G   S   LG A
Subjt:  RLHLV--RCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATDCWIGTKSSAIKLGSA

AT3G57790.1 Pectin lyase-like superfamily protein

6.9e-74

55.29

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Query:  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSH
        LH+VRCENT + DVSI GDFNTPNNDGIDIEDSNNT ITRC IDTGDDAICPKT  GP++NLTATDCWI TKSSAIKLGSASWF+F  L+FDNITI +SH
Subjt:  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITIVDSH

Query:  RGLGFQL------------------------------------MAVNPGSKEGSISN---INITATSENGVFLSGSKSGVLSNLRFTNVKLSYKRWTKYG
        RGLG Q+                                       +  +KEGSISN   +NIT  SENGVFLSGS +G+LS+++F N+ L+++RW+ Y 
Subjt:  RGLGFQL------------------------------------MAVNPGSKEGSISN---INITATSENGVFLSGSKSGVLSNLRFTNVKLSYKRWTKYG

Query:  GGLADYRPGCQGF------------HIEGLSFENVDMKWS--DNVSLQWNNPMDF
         GL DYRPGCQG             H+ G   ENVD+KWS  D+V+  WN P++F
Subjt:  GGLADYRPGCQGF------------HIEGLSFENVDMKWS--DNVSLQWNNPMDF

AT3G62110.1 Pectin lyase-like superfamily protein

2.5e-07

25.13

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Query:  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPK-------------TSNGPVFNLTATDCWIGTKSSAIKLGSASWFNFT
        +H V C + V+++++I     +PN DG+D + S N  I  C I TGDD +  K             +S   +  LT       T SS I +GS      +
Subjt:  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPK-------------TSNGPVFNLTATDCWIGTKSSAIKLGSASWFNFT

Query:  RLLFDNITIVDSHRGLGFQLMAVNPGSKEGSISNINITATSENGVFLSGSKSGVLSNLRFTNVKLSYKRWTKYGGGLAD-YRPGCQGFHIEGLSFENVD
         +   ++ + +S+ G+  +  A     + G + N++I                   N++  NVK + +   KYG    + Y P      IE ++FENV+
Subjt:  RLLFDNITIVDSHRGLGFQLMAVNPGSKEGSISNINITATSENGVFLSGSKSGVLSNLRFTNVKLSYKRWTKYGGGLAD-YRPGCQGFHIEGLSFENVD

AT4G23820.1 Pectin lyase-like superfamily protein

9.4e-07

29.73

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Query:  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTS--------NGPVFNLTATDCWIGTKSSAIKLGSASWFNFTRLLFD
        +H V C N VI  V+I    ++PN DGID + S N  I    I TGDD +  K+           P  N+T       +  + I +GS +      ++ +
Subjt:  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTS--------NGPVFNLTATDCWIGTKSSAIKLGSASWFNFTRLLFD

Query:  NITIVDSHRGLGFQLMAVNPGSKEGSISNINIT----ATSENGVFLSG
        +IT+  S+ G+G  +   N G + G I NI I+     T++ G+ ++G
Subjt:  NITIVDSHRGLGFQLMAVNPGSKEGSISNINIT----ATSENGVFLSG

AT4G33440.1 Pectin lyase-like superfamily protein

9.4e-07

29.77

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Query:  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTS--------NGPVFNLTATDCWIGTKS-SAIKLGSASWFNFTRLLF
        +H V C N VI +++I    N PN DGID + S N  I  C I++GDD +  K+           P  N+        T++ S + +GS        +  
Subjt:  LHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTS--------NGPVFNLTATDCWIGTKS-SAIKLGSASWFNFTRLLF

Query:  DNITIVDSHRGLGFQLMAVNPGSKEGSISNI
        ++I + DS  GL  +        + G ISNI
Subjt:  DNITIVDSHRGLGFQLMAVNPGSKEGSISNI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTCACTAGAAGGCCAAAAGATGATCTACAATTACATCGCTTGCATCTTGTTCGATGTGAGAACACAGTCATTGAAGATGTTTCCATTTATGGAGATTTCAATACACC
CAACAACGATGGGATTGATATTGAAGACTCCAATAATACCTTCATTACAAGGTGCAGAATTGACACTGGGGATGATGCAATCTGCCCCAAAACATCTAATGGCCCTGTTT
TCAACTTAACTGCCACTGACTGCTGGATTGGAACTAAATCCTCTGCTATTAAGCTGGGTAGTGCCAGTTGGTTCAATTTCACCCGATTGCTCTTCGACAACATCACCATT
GTCGATTCTCATCGAGGTCTCGGGTTCCAGCTGATGGCGGTAAATCCAGGCTCGAAGGAGGGTTCGATCTCAAACATAAACATCACGGCAACCTCCGAAAACGGGGTTTT
CTTGTCGGGATCGAAATCCGGGGTTCTGAGTAATCTGAGATTCACCAATGTGAAGCTGAGCTACAAAAGATGGACAAAATATGGTGGTGGTTTAGCAGACTACAGGCCAG
GATGCCAAGGCTTTCATATTGAAGGTTTGAGTTTTGAAAATGTTGACATGAAATGGTCTGATAATGTATCTTTACAGTGGAATAATCCAATGGACTTTCATTCAGGTTAT
TTAAGAGAATGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MVTRRPKDDLQLHRLHLVRCENTVIEDVSIYGDFNTPNNDGIDIEDSNNTFITRCRIDTGDDAICPKTSNGPVFNLTATDCWIGTKSSAIKLGSASWFNFTRLLFDNITI
VDSHRGLGFQLMAVNPGSKEGSISNINITATSENGVFLSGSKSGVLSNLRFTNVKLSYKRWTKYGGGLADYRPGCQGFHIEGLSFENVDMKWSDNVSLQWNNPMDFHSGY
LRE

Sed0006827 (gene) of Chayote v1 genome