CuGenDBv2

Gene ID	Sed0006831
Organism	Sechium edule (Chayote v1)
Description	TPR_REGION domain-containing protein
Genome location	LG03:8910554..8912565
RNA-Seq Expression	Sed0006831
Synteny	Sed0006831
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0005515 - protein binding (molecular function) GO:0016740 - transferase activity (molecular function)
InterPro domains	IPR011990 - Tetratricopeptide-like helical domain superfamily IPR019734 - Tetratricopeptide repeat

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7020255.1 hypothetical protein SDJN02_16938, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.2e-84

88.15

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Query:  MLSDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRCFVRGAKLLARARSAPSRSSAASLAEEVVAEADKAIALDPKDAAAHILKALALDI
        M++DILLQIALILVMVVMFLAMHNIPQRFFAKLR RFR+DVESKR FVRGA+LLARARSAPSRSSA SLAE+VVAEADKAIALDPKDAAAHILKALALDI
Subjt:  MLSDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRCFVRGAKLLARARSAPSRSSAASLAEEVVAEADKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLAAKSLTDGERGDALLKRAELKISTNRRTLVNSALADLTESVTLSSNAKTYCLLGKCYEMKKLSVEAKKAYEEALIIEPRLSN
        QGF+TSALESLDTALSPLAAKSL++ ERGDAL KRAELK+STNRRT+V+SALADLTESVTLS NA  YC LGKCYEMKKL  EAKKAYEEAL IEPRLS 
Subjt:  QGFKTSALESLDTALSPLAAKSLTDGERGDALLKRAELKISTNRRTLVNSALADLTESVTLSSNAKTYCLLGKCYEMKKLSVEAKKAYEEALIIEPRLSN

Query:  AREALDRLSSS
        AREAL+RLSSS
Subjt:  AREALDRLSSS

XP_008444918.1 PREDICTED: uncharacterized protein LOC103488119 [Cucumis melo]

1.4e-83

87.68

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Query:  MLSDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRCFVRGAKLLARARSAPSRSSAASLAEEVVAEADKAIALDPKDAAAHILKALALDI
        M++DILLQIALILVMVVMFLAMHNIPQR+FAKLRLRFR++VESKR FVRGA+LLARARSAPSRSSA SLAEEVVAEA+KAIALDPKDAAAHILKALALD+
Subjt:  MLSDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRCFVRGAKLLARARSAPSRSSAASLAEEVVAEADKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLAAKSLTDGERGDALLKRAELKISTNRRTLVNSALADLTESVTLSSNAKTYCLLGKCYEMKKLSVEAKKAYEEALIIEPRLSN
        QGFKTSALESLDTALSPL AKSL+D ERGDAL KRAELK+STNRR LV+SALADLTESVTLS NA +Y  LGKCYEMKKL  EAKKAYEEAL IEPRLSN
Subjt:  QGFKTSALESLDTALSPLAAKSLTDGERGDALLKRAELKISTNRRTLVNSALADLTESVTLSSNAKTYCLLGKCYEMKKLSVEAKKAYEEALIIEPRLSN

Query:  AREALDRLSSS
        AREAL+RLSSS
Subjt:  AREALDRLSSS

XP_022951869.1 uncharacterized protein LOC111454602 [Cucurbita moschata]

1.0e-84

88.63

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Query:  MLSDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRCFVRGAKLLARARSAPSRSSAASLAEEVVAEADKAIALDPKDAAAHILKALALDI
        M++DILLQIALILVMVVMFLAMHNIPQRFFAKLR RFR+DVESKR FVRGA+LLARARSAPSRSSA SLAE+VVAEADKAIALDPKDAAAHILKALALDI
Subjt:  MLSDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRCFVRGAKLLARARSAPSRSSAASLAEEVVAEADKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLAAKSLTDGERGDALLKRAELKISTNRRTLVNSALADLTESVTLSSNAKTYCLLGKCYEMKKLSVEAKKAYEEALIIEPRLSN
        QGFKTSALESLDTALSPLAAKSL++ ERGDAL KRAELK+STNRRT+V+SALADLTESVTLS NA  YC LGKCYEMKKL  EAKKAYEEAL IEPRLS 
Subjt:  QGFKTSALESLDTALSPLAAKSLTDGERGDALLKRAELKISTNRRTLVNSALADLTESVTLSSNAKTYCLLGKCYEMKKLSVEAKKAYEEALIIEPRLSN

Query:  AREALDRLSSS
        AREAL+RLSSS
Subjt:  AREALDRLSSS

XP_023002879.1 uncharacterized protein LOC111496615 [Cucurbita maxima]

1.4e-83

87.2

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Query:  MLSDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRCFVRGAKLLARARSAPSRSSAASLAEEVVAEADKAIALDPKDAAAHILKALALDI
        M++DILLQIALILVMVVMFLAMHNIPQRFFAKLR RFR+DVESKR FVRGA+LLARARSAPSRSSA SLAE+VVAEADKAIALDPKDAAAHILKALALDI
Subjt:  MLSDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRCFVRGAKLLARARSAPSRSSAASLAEEVVAEADKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLAAKSLTDGERGDALLKRAELKISTNRRTLVNSALADLTESVTLSSNAKTYCLLGKCYEMKKLSVEAKKAYEEALIIEPRLSN
        QGFKTSALESLDTALSPLAAKSL++ ERGDAL KRAELK+STNRR +V+SA+ADLTESVTLS NA  YC LGKCYEMKKL  EAKKAYEEAL IEPRLS 
Subjt:  QGFKTSALESLDTALSPLAAKSLTDGERGDALLKRAELKISTNRRTLVNSALADLTESVTLSSNAKTYCLLGKCYEMKKLSVEAKKAYEEALIIEPRLSN

Query:  AREALDRLSSS
        AREAL+RLS+S
Subjt:  AREALDRLSSS

XP_023537835.1 uncharacterized protein LOC111798743 [Cucurbita pepo subsp. pepo]

3.8e-84

88.15

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Query:  MLSDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRCFVRGAKLLARARSAPSRSSAASLAEEVVAEADKAIALDPKDAAAHILKALALDI
        M++DILLQIALILVMVVMFLAMHNIPQRFFAKLR RFR+DVESKR FVRGA+LLARARSAPSRSSA SLAE+VVAEADKAIALDPKDAAAHILKALALDI
Subjt:  MLSDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRCFVRGAKLLARARSAPSRSSAASLAEEVVAEADKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLAAKSLTDGERGDALLKRAELKISTNRRTLVNSALADLTESVTLSSNAKTYCLLGKCYEMKKLSVEAKKAYEEALIIEPRLSN
        QGFKTSALESLDTALSPLAAKSL++ ERGDAL KRAELK+STNRR +V+SALADLTESVTLS NA  YC LGKCYEMKKL  EAKKAYEEAL IEPRLS 
Subjt:  QGFKTSALESLDTALSPLAAKSLTDGERGDALLKRAELKISTNRRTLVNSALADLTESVTLSSNAKTYCLLGKCYEMKKLSVEAKKAYEEALIIEPRLSN

Query:  AREALDRLSSS
        AREAL+RLSSS
Subjt:  AREALDRLSSS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LPL8 TPR_REGION domain-containing protein

1.0e-82

87.2

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Query:  MLSDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRCFVRGAKLLARARSAPSRSSAASLAEEVVAEADKAIALDPKDAAAHILKALALDI
        M++DILLQIALILVMVVMFLAMHNIPQR+FAKLRLRFR++VESKR FVRGA+LLARARSAPSRSSA SLAEEVVAEA+KAIALDPKDAAAHILKALALD 
Subjt:  MLSDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRCFVRGAKLLARARSAPSRSSAASLAEEVVAEADKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLAAKSLTDGERGDALLKRAELKISTNRRTLVNSALADLTESVTLSSNAKTYCLLGKCYEMKKLSVEAKKAYEEALIIEPRLSN
        QGFKTSALESLDTALSPL AKSL+D ERGDAL KRAELK+STNRR LV+SALADLTESVTLS NA +Y  LGKCYE KKL  EAKKAYEEAL IEPRLSN
Subjt:  QGFKTSALESLDTALSPLAAKSLTDGERGDALLKRAELKISTNRRTLVNSALADLTESVTLSSNAKTYCLLGKCYEMKKLSVEAKKAYEEALIIEPRLSN

Query:  AREALDRLSSS
        AREAL+RLSSS
Subjt:  AREALDRLSSS

A0A1S3BC86 uncharacterized protein LOC103488119

7.0e-84

87.68

Show/hide

Query:  MLSDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRCFVRGAKLLARARSAPSRSSAASLAEEVVAEADKAIALDPKDAAAHILKALALDI
        M++DILLQIALILVMVVMFLAMHNIPQR+FAKLRLRFR++VESKR FVRGA+LLARARSAPSRSSA SLAEEVVAEA+KAIALDPKDAAAHILKALALD+
Subjt:  MLSDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRCFVRGAKLLARARSAPSRSSAASLAEEVVAEADKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLAAKSLTDGERGDALLKRAELKISTNRRTLVNSALADLTESVTLSSNAKTYCLLGKCYEMKKLSVEAKKAYEEALIIEPRLSN
        QGFKTSALESLDTALSPL AKSL+D ERGDAL KRAELK+STNRR LV+SALADLTESVTLS NA +Y  LGKCYEMKKL  EAKKAYEEAL IEPRLSN
Subjt:  QGFKTSALESLDTALSPLAAKSLTDGERGDALLKRAELKISTNRRTLVNSALADLTESVTLSSNAKTYCLLGKCYEMKKLSVEAKKAYEEALIIEPRLSN

Query:  AREALDRLSSS
        AREAL+RLSSS
Subjt:  AREALDRLSSS

A0A5A7VBU3 TPR domain protein

7.0e-84

87.68

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Query:  MLSDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRCFVRGAKLLARARSAPSRSSAASLAEEVVAEADKAIALDPKDAAAHILKALALDI
        M++DILLQIALILVMVVMFLAMHNIPQR+FAKLRLRFR++VESKR FVRGA+LLARARSAPSRSSA SLAEEVVAEA+KAIALDPKDAAAHILKALALD+
Subjt:  MLSDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRCFVRGAKLLARARSAPSRSSAASLAEEVVAEADKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLAAKSLTDGERGDALLKRAELKISTNRRTLVNSALADLTESVTLSSNAKTYCLLGKCYEMKKLSVEAKKAYEEALIIEPRLSN
        QGFKTSALESLDTALSPL AKSL+D ERGDAL KRAELK+STNRR LV+SALADLTESVTLS NA +Y  LGKCYEMKKL  EAKKAYEEAL IEPRLSN
Subjt:  QGFKTSALESLDTALSPLAAKSLTDGERGDALLKRAELKISTNRRTLVNSALADLTESVTLSSNAKTYCLLGKCYEMKKLSVEAKKAYEEALIIEPRLSN

Query:  AREALDRLSSS
        AREAL+RLSSS
Subjt:  AREALDRLSSS

A0A6J1GK03 uncharacterized protein LOC111454602

4.8e-85

88.63

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Query:  MLSDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRCFVRGAKLLARARSAPSRSSAASLAEEVVAEADKAIALDPKDAAAHILKALALDI
        M++DILLQIALILVMVVMFLAMHNIPQRFFAKLR RFR+DVESKR FVRGA+LLARARSAPSRSSA SLAE+VVAEADKAIALDPKDAAAHILKALALDI
Subjt:  MLSDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRCFVRGAKLLARARSAPSRSSAASLAEEVVAEADKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLAAKSLTDGERGDALLKRAELKISTNRRTLVNSALADLTESVTLSSNAKTYCLLGKCYEMKKLSVEAKKAYEEALIIEPRLSN
        QGFKTSALESLDTALSPLAAKSL++ ERGDAL KRAELK+STNRRT+V+SALADLTESVTLS NA  YC LGKCYEMKKL  EAKKAYEEAL IEPRLS 
Subjt:  QGFKTSALESLDTALSPLAAKSLTDGERGDALLKRAELKISTNRRTLVNSALADLTESVTLSSNAKTYCLLGKCYEMKKLSVEAKKAYEEALIIEPRLSN

Query:  AREALDRLSSS
        AREAL+RLSSS
Subjt:  AREALDRLSSS

A0A6J1KRQ5 uncharacterized protein LOC111496615

7.0e-84

87.2

Show/hide

Query:  MLSDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRCFVRGAKLLARARSAPSRSSAASLAEEVVAEADKAIALDPKDAAAHILKALALDI
        M++DILLQIALILVMVVMFLAMHNIPQRFFAKLR RFR+DVESKR FVRGA+LLARARSAPSRSSA SLAE+VVAEADKAIALDPKDAAAHILKALALDI
Subjt:  MLSDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRCFVRGAKLLARARSAPSRSSAASLAEEVVAEADKAIALDPKDAAAHILKALALDI

Query:  QGFKTSALESLDTALSPLAAKSLTDGERGDALLKRAELKISTNRRTLVNSALADLTESVTLSSNAKTYCLLGKCYEMKKLSVEAKKAYEEALIIEPRLSN
        QGFKTSALESLDTALSPLAAKSL++ ERGDAL KRAELK+STNRR +V+SA+ADLTESVTLS NA  YC LGKCYEMKKL  EAKKAYEEAL IEPRLS 
Subjt:  QGFKTSALESLDTALSPLAAKSLTDGERGDALLKRAELKISTNRRTLVNSALADLTESVTLSSNAKTYCLLGKCYEMKKLSVEAKKAYEEALIIEPRLSN

Query:  AREALDRLSSS
        AREAL+RLS+S
Subjt:  AREALDRLSSS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G65520.1 Tetratricopeptide repeat (TPR)-like superfamily protein

3.5e-35

44.28

Show/hide

Query:  SDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRCFVRGAKLLARARSAPSRSSAASLAEEVVAEADKAIALDPKDAAAHILKALALDIQG
        ++ ++Q A++++ +VMF A+  + QR   K R + RA ++++R  ++ ++LLARAR+ P +S + SLA+  + EAD  IA+ P DAA HI++ALALD+ G
Subjt:  SDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRCFVRGAKLLARARSAPSRSSAASLAEEVVAEADKAIALDPKDAAAHILKALALDIQG

Query:  FKTSALESLDTALSPLAAKSLTDGERGDALLKRAELKISTNRRTLVNSALADLTESVTLSS---NAKTYCLLGKCYEMKKLSVEAKKAYEEALIIEPRLS
          TSAL+S D AL+    KSL+ GER DAL+KRAE+K++ NRR  ++SA+ DL E+V L++    A+ + LLG+CYE K L  +A+ A+ EAL  +P   
Subjt:  FKTSALESLDTALSPLAAKSLTDGERGDALLKRAELKISTNRRTLVNSALADLTESVTLSS---NAKTYCLLGKCYEMKKLSVEAKKAYEEALIIEPRLS

Query:  N
        N
Subjt:  N

Sequences

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CDS sequence

Show/hide CDS sequence

ATGTTGAGCGACATCCTTCTTCAAATAGCTCTCATCCTCGTTATGGTCGTCATGTTCCTCGCGATGCACAACATTCCACAGAGATTCTTCGCCAAGCTCCGATTGCGCTT
CCGAGCCGATGTCGAATCCAAGCGCTGCTTCGTGAGAGGCGCTAAGCTTCTCGCTCGAGCCAGATCTGCACCGTCGCGCTCATCGGCGGCGTCGTTGGCGGAAGAAGTGG
TGGCGGAGGCCGATAAGGCGATCGCTCTCGATCCTAAGGACGCTGCTGCTCACATCCTCAAGGCTTTGGCTCTCGACATTCAAGGATTCAAAACCTCCGCTCTCGAATCG
CTCGATACGGCTCTGTCGCCGCTCGCCGCTAAGTCGCTCACCGACGGGGAGCGAGGCGACGCGTTGCTCAAACGCGCCGAGTTGAAGATTTCCACGAATCGGCGAACTCT
AGTTAACTCCGCTTTGGCTGATTTGACCGAATCTGTAACGCTGAGTTCGAATGCGAAAACCTATTGTTTGTTGGGGAAATGCTATGAGATGAAGAAATTGAGCGTAGAAG
CGAAGAAAGCGTATGAGGAAGCGTTGATCATCGAGCCGCGATTATCCAACGCTCGGGAGGCATTGGATCGTTTATCATCGTCGTAA

mRNA sequence

Show/hide mRNA sequence

CACAAAACACTAATTTATTCTTATTTCTCTTCCCTTTCCTTTCTAACCAAACAAGCCCTTAGATTCGACAATTTCATGGTACATCATTTAAATCAACCCAACTGCACATT
TGCCCAATTCAATTATTAATAACATTTAGTCCATAGTCCTTTCTTTCTTCGAAGTAGCTGCAAAGCGCGACGGCAAAGAATTAAACGCCGCCGCCTGCAGACGGCGGACC
CGCCACGAAATCCACACCCGAGCTCCGTCCAGATCCGATTCCGATCGTAATCGGAGTTCTTCCACTTCACGAAAATCGATCGAAAGCAGCGGAGTTAAAGAAATCGCAGG
CTGTTCATCAGAGATCGACAAAGATGTTGAGCGACATCCTTCTTCAAATAGCTCTCATCCTCGTTATGGTCGTCATGTTCCTCGCGATGCACAACATTCCACAGAGATTC
TTCGCCAAGCTCCGATTGCGCTTCCGAGCCGATGTCGAATCCAAGCGCTGCTTCGTGAGAGGCGCTAAGCTTCTCGCTCGAGCCAGATCTGCACCGTCGCGCTCATCGGC
GGCGTCGTTGGCGGAAGAAGTGGTGGCGGAGGCCGATAAGGCGATCGCTCTCGATCCTAAGGACGCTGCTGCTCACATCCTCAAGGCTTTGGCTCTCGACATTCAAGGAT
TCAAAACCTCCGCTCTCGAATCGCTCGATACGGCTCTGTCGCCGCTCGCCGCTAAGTCGCTCACCGACGGGGAGCGAGGCGACGCGTTGCTCAAACGCGCCGAGTTGAAG
ATTTCCACGAATCGGCGAACTCTAGTTAACTCCGCTTTGGCTGATTTGACCGAATCTGTAACGCTGAGTTCGAATGCGAAAACCTATTGTTTGTTGGGGAAATGCTATGA
GATGAAGAAATTGAGCGTAGAAGCGAAGAAAGCGTATGAGGAAGCGTTGATCATCGAGCCGCGATTATCCAACGCTCGGGAGGCATTGGATCGTTTATCATCGTCGTAAT
GCTTATGCCGATTTCTTCTGTGGTCAATGTGAGGTCAGCGCTGGATGAACATGTCTCAATTTTATCAGGTTTTTCACTTCCATTCTTGTGGATTCTCATTCTAATATTGG
TTGGCCTATGATTGAGATGCTGAATTGGGTTCTGATATGAAATTCTAGCTGCAATGCGTTTGAAAATATGCTTCCAATCTCTGAACAAAAGCCTTCGAATAGTTTTATAT
TTCCTACGTTTTTGTGTTGCTGTTAAAATTGGTGAAGTTGTTGAGTAGACTAGATAGCAATCTACTCTTAGTTAGGTAGGTTTATAAGATAGCTAGTCTACTCGTTTCGT
CACTACTTATTAGATAGGTTGTTTACTACTCTCGTGAATTAGGGACGGGCTTGGTTACCTTGTTTCAAACAACTAGTCTCGTCACTACTTATAAGATAGGTTGTTTGCTA
GTCTTGTCACTACTTATAAGATGGGTTATGTACTCTCGTCACTACTTATAATATACGTTGTTTACTAGTTTCATTGTTACCTTATAAGATATGTTGTTTACTTATCTCAA
TGTTACCTTTAATCTTATAAGATATAAAATATGTGGTTTCATGAGCAGCAAAAAAGGTTTAAAAAAGAAAAATTCATCTGATGTCAAAAGACTGATAAATATTTCATATT
TTACTATGAAATATTTTTTAAAAATTTCTATAATTAAAATAGGTACACTAGAATGTGCTATCTAGAACAACATATGTCGTTTACTAATATATTACCTTACATTGGGCCAC
TTTATTGTCATATTATCTAATATGCTATTAGATCTCTGTCTTATTCATTTATGAGTTGTAATTCTGTATGGAGAAACATTGTGGGTTCTAGTGGTTTGGGCTGTTGCGAA
AAGATAACACCAAGATTCATCATAGTTGTACATGGGAATTTTCGTAGGACAAAAGTTGCTTGTCTCAAATAATTTCTACACTTCAAGCTTGTCGTTGAAAAGGCAACTTC
AGCTAGGAGCCTCTGGAAAGATAACTAGGGGC

Protein sequence

Show/hide protein sequence

MLSDILLQIALILVMVVMFLAMHNIPQRFFAKLRLRFRADVESKRCFVRGAKLLARARSAPSRSSAASLAEEVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALES
LDTALSPLAAKSLTDGERGDALLKRAELKISTNRRTLVNSALADLTESVTLSSNAKTYCLLGKCYEMKKLSVEAKKAYEEALIIEPRLSNAREALDRLSSS

Sed0006831 (gene) of Chayote v1 genome