; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0006832 (gene) of Chayote v1 genome

Gene IDSed0006832
OrganismSechium edule (Chayote v1)
Descriptionprotein DCL homolog, chloroplastic
Genome locationLG13:22454561..22458776
RNA-Seq ExpressionSed0006832
SyntenySed0006832
Gene Ontology termsGO:0009658 - chloroplast organization (biological process)
GO:1901259 - chloroplast rRNA processing (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR044673 - Protein DCL-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064386.1 protein DCL [Cucumis melo var. makuwa]3.1e-10081.86Show/hide
Query:  MAMASVLKPPPFVPYHSPNPSFFNSSSLILCFPA--MNSFHPSIRALRTGPDGTRIRSLEEYSSDLLRKPVVPPAKDLAGLSE----VEESGNDDDGEEE
        MAMAS+L   PF P+HS NP+FFNSS LILCFP   +NSFHPS RAL+TGP+G+RIRS +EYSSDLLRKPVVPPAKDLAG SE     EESGND++ EE 
Subjt:  MAMASVLKPPPFVPYHSPNPSFFNSSSLILCFPA--MNSFHPSIRALRTGPDGTRIRSLEEYSSDLLRKPVVPPAKDLAGLSE----VEESGNDDDGEEE

Query:  DWVDWEDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGL
        DWVDWEDKILEDTVPLVGFVRM+LH+ KY SGDRL PEHEKTIL+RLLPYHPE EKKIGCG+DYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGL
Subjt:  DWVDWEDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGL

Query:  IRKNYPLHAESFILRHFRKRRNNFRR
        IRKNYPL+AESFILRHFR+RR N RR
Subjt:  IRKNYPLHAESFILRHFRKRRNNFRR

XP_004141259.1 protein DCL homolog, chloroplastic [Cucumis sativus]8.9e-10080.53Show/hide
Query:  MAMASVLKPPPFVPYHSPNPSFFNSSSLILCFPA--MNSFHPSIRALRTGPDGTRIRSLEEYSSDLLRKPVVPPAKDLAGLSE----VEESGNDDDGEEE
        MAMAS+LKPPPF P+HS NP+FFNSS LILCFP   +NSFHPS RAL+TGP+G R+RS +EYSSDLLRKPV P AKDLAG SE     EESGN+D+ EE 
Subjt:  MAMASVLKPPPFVPYHSPNPSFFNSSSLILCFPA--MNSFHPSIRALRTGPDGTRIRSLEEYSSDLLRKPVVPPAKDLAGLSE----VEESGNDDDGEEE

Query:  DWVDWEDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGL
        +WVDWEDKILEDTVPLVGFVRM+LH+ KY +GDRL PEHEKTIL+RLLPYHPE EKKIGCG+DYITVGYHPDFESSRCLFIVRKDGE+VDFSYWKCIKGL
Subjt:  DWVDWEDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGL

Query:  IRKNYPLHAESFILRHFRKRRNNFRR
        IRKNYPL+AESFILRHFR+RR N RR
Subjt:  IRKNYPLHAESFILRHFRKRRNNFRR

XP_008452556.1 PREDICTED: protein DCL, chloroplastic [Cucumis melo]3.1e-10081.86Show/hide
Query:  MAMASVLKPPPFVPYHSPNPSFFNSSSLILCFPA--MNSFHPSIRALRTGPDGTRIRSLEEYSSDLLRKPVVPPAKDLAGLSE----VEESGNDDDGEEE
        MAMAS+L   PF P+HS NP+FFNSS LILCFP   +NSFHPS RAL+TGP+G+RIRS +EYSSDLLRKPVVPPAKDLAG SE     EESGND++ EE 
Subjt:  MAMASVLKPPPFVPYHSPNPSFFNSSSLILCFPA--MNSFHPSIRALRTGPDGTRIRSLEEYSSDLLRKPVVPPAKDLAGLSE----VEESGNDDDGEEE

Query:  DWVDWEDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGL
        DWVDWEDKILEDTVPLVGFVRM+LH+ KY SGDRL PEHEKTIL+RLLPYHPE EKKIGCG+DYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGL
Subjt:  DWVDWEDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGL

Query:  IRKNYPLHAESFILRHFRKRRNNFRR
        IRKNYPL+AESFILRHFR+RR N RR
Subjt:  IRKNYPLHAESFILRHFRKRRNNFRR

XP_022133006.1 protein DCL homolog, chloroplastic [Momordica charantia]1.0e-10384.44Show/hide
Query:  MAMASVLKPPPFVPYHSPNPSFFNSSSLILCFP--AMNSFHPSIRALRTGPDGTRIRSLEEYSSDLLRKPVVPPAKDLAGLSE----VEESGNDDDGEEE
        MAMASV KPPPF P+HS NPSF NSS +ILCFP   M S HPSIRAL+TGP+G+RIRS EEYSSDLLRKPVVPPAKD A +SE     EESG D + EEE
Subjt:  MAMASVLKPPPFVPYHSPNPSFFNSSSLILCFP--AMNSFHPSIRALRTGPDGTRIRSLEEYSSDLLRKPVVPPAKDLAGLSE----VEESGNDDDGEEE

Query:  DWVDWEDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGL
        DWVDWEDKILEDTVPLVGFVRM+LHS KYGSGDRLS EHEKTILDRLLPYHPECEKKIGCGIDYIT+GYHPDFESSRCLFIVRKDGELVDFSYWKCIKGL
Subjt:  DWVDWEDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGL

Query:  IRKNYPLHAESFILRHFRKRRNNFR
        IRKNYPLHAESFILRHFR+RR N+R
Subjt:  IRKNYPLHAESFILRHFRKRRNNFR

XP_038897137.1 protein DCL homolog, chloroplastic [Benincasa hispida]6.3e-10685.09Show/hide
Query:  MAMAMASVLKPPPFVPYHSPNPSFFNSSSLILCFPA--MNSFHPSIRALRTGPDGTRIRSLEEYSSDLLRKPVVPPAKDLAGLSE----VEESGNDDDGE
        M MAMAS+LKPPPFVP HS NP+FFNSS +ILCFP   M SFH S RAL+TGP+G+RIRS EEYSSDLLRKPVVPPA+DLA LSE     EESGNDD+ E
Subjt:  MAMAMASVLKPPPFVPYHSPNPSFFNSSSLILCFPA--MNSFHPSIRALRTGPDGTRIRSLEEYSSDLLRKPVVPPAKDLAGLSE----VEESGNDDDGE

Query:  EEDWVDWEDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIK
        EEDWVDWEDKILEDTVPLVGFVRM+LHS KYGSGDRL+PEHEKTILDRLLPYHPE EKKIGCGIDYIT+GYHPDFESSRCLFIVRKDGELVDFSYWKCIK
Subjt:  EEDWVDWEDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIK

Query:  GLIRKNYPLHAESFILRHFRKRRNNFRR
        GLIRK YPLHAESFILRHFR+RR NFRR
Subjt:  GLIRKNYPLHAESFILRHFRKRRNNFRR

TrEMBL top hitse value%identityAlignment
A0A0A0L2D0 Uncharacterized protein4.3e-10080.53Show/hide
Query:  MAMASVLKPPPFVPYHSPNPSFFNSSSLILCFPA--MNSFHPSIRALRTGPDGTRIRSLEEYSSDLLRKPVVPPAKDLAGLSE----VEESGNDDDGEEE
        MAMAS+LKPPPF P+HS NP+FFNSS LILCFP   +NSFHPS RAL+TGP+G R+RS +EYSSDLLRKPV P AKDLAG SE     EESGN+D+ EE 
Subjt:  MAMASVLKPPPFVPYHSPNPSFFNSSSLILCFPA--MNSFHPSIRALRTGPDGTRIRSLEEYSSDLLRKPVVPPAKDLAGLSE----VEESGNDDDGEEE

Query:  DWVDWEDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGL
        +WVDWEDKILEDTVPLVGFVRM+LH+ KY +GDRL PEHEKTIL+RLLPYHPE EKKIGCG+DYITVGYHPDFESSRCLFIVRKDGE+VDFSYWKCIKGL
Subjt:  DWVDWEDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGL

Query:  IRKNYPLHAESFILRHFRKRRNNFRR
        IRKNYPL+AESFILRHFR+RR N RR
Subjt:  IRKNYPLHAESFILRHFRKRRNNFRR

A0A1S3BVA4 protein DCL, chloroplastic1.5e-10081.86Show/hide
Query:  MAMASVLKPPPFVPYHSPNPSFFNSSSLILCFPA--MNSFHPSIRALRTGPDGTRIRSLEEYSSDLLRKPVVPPAKDLAGLSE----VEESGNDDDGEEE
        MAMAS+L   PF P+HS NP+FFNSS LILCFP   +NSFHPS RAL+TGP+G+RIRS +EYSSDLLRKPVVPPAKDLAG SE     EESGND++ EE 
Subjt:  MAMASVLKPPPFVPYHSPNPSFFNSSSLILCFPA--MNSFHPSIRALRTGPDGTRIRSLEEYSSDLLRKPVVPPAKDLAGLSE----VEESGNDDDGEEE

Query:  DWVDWEDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGL
        DWVDWEDKILEDTVPLVGFVRM+LH+ KY SGDRL PEHEKTIL+RLLPYHPE EKKIGCG+DYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGL
Subjt:  DWVDWEDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGL

Query:  IRKNYPLHAESFILRHFRKRRNNFRR
        IRKNYPL+AESFILRHFR+RR N RR
Subjt:  IRKNYPLHAESFILRHFRKRRNNFRR

A0A5A7VDC9 Protein DCL1.5e-10081.86Show/hide
Query:  MAMASVLKPPPFVPYHSPNPSFFNSSSLILCFPA--MNSFHPSIRALRTGPDGTRIRSLEEYSSDLLRKPVVPPAKDLAGLSE----VEESGNDDDGEEE
        MAMAS+L   PF P+HS NP+FFNSS LILCFP   +NSFHPS RAL+TGP+G+RIRS +EYSSDLLRKPVVPPAKDLAG SE     EESGND++ EE 
Subjt:  MAMASVLKPPPFVPYHSPNPSFFNSSSLILCFPA--MNSFHPSIRALRTGPDGTRIRSLEEYSSDLLRKPVVPPAKDLAGLSE----VEESGNDDDGEEE

Query:  DWVDWEDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGL
        DWVDWEDKILEDTVPLVGFVRM+LH+ KY SGDRL PEHEKTIL+RLLPYHPE EKKIGCG+DYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGL
Subjt:  DWVDWEDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGL

Query:  IRKNYPLHAESFILRHFRKRRNNFRR
        IRKNYPL+AESFILRHFR+RR N RR
Subjt:  IRKNYPLHAESFILRHFRKRRNNFRR

A0A6J1BTU2 protein DCL homolog, chloroplastic4.9e-10484.44Show/hide
Query:  MAMASVLKPPPFVPYHSPNPSFFNSSSLILCFP--AMNSFHPSIRALRTGPDGTRIRSLEEYSSDLLRKPVVPPAKDLAGLSE----VEESGNDDDGEEE
        MAMASV KPPPF P+HS NPSF NSS +ILCFP   M S HPSIRAL+TGP+G+RIRS EEYSSDLLRKPVVPPAKD A +SE     EESG D + EEE
Subjt:  MAMASVLKPPPFVPYHSPNPSFFNSSSLILCFP--AMNSFHPSIRALRTGPDGTRIRSLEEYSSDLLRKPVVPPAKDLAGLSE----VEESGNDDDGEEE

Query:  DWVDWEDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGL
        DWVDWEDKILEDTVPLVGFVRM+LHS KYGSGDRLS EHEKTILDRLLPYHPECEKKIGCGIDYIT+GYHPDFESSRCLFIVRKDGELVDFSYWKCIKGL
Subjt:  DWVDWEDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGL

Query:  IRKNYPLHAESFILRHFRKRRNNFR
        IRKNYPLHAESFILRHFR+RR N+R
Subjt:  IRKNYPLHAESFILRHFRKRRNNFR

A0A6J1FJS0 protein DCL homolog, chloroplastic-like1.8e-9881.17Show/hide
Query:  MAMAMASVLKPPPFVPYHSPNPSFFNSSSLILCFPA--MNSFHPSIRALRTGPDGTRIRSLEEYSSDLLRKPVVPPAKDLAGLSEVEES---GNDDDGEE
        M MA+AS+LKPPP VP+HS NPSFF SS +ILCFP   M SFHPS RAL TGP+G+RIRS EE SSDLLRKPVVPPAKDLAGLSE EES     DDD EE
Subjt:  MAMAMASVLKPPPFVPYHSPNPSFFNSSSLILCFPA--MNSFHPSIRALRTGPDGTRIRSLEEYSSDLLRKPVVPPAKDLAGLSEVEES---GNDDDGEE

Query:  EDWVDWEDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKG
        EDWVDWE+ ILEDTVPLV FVRM+LHS KY  GDRLSPEHEKTIL+RLLPYHP+ EKK+GCGIDYITV YHPD+ESSRCLFIVRKDGELVDFSYWKCIK 
Subjt:  EDWVDWEDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKG

Query:  LIRKNYPLHAESFILRHFRKRRN
        LIRK YPLHAESFILRHFR+RRN
Subjt:  LIRKNYPLHAESFILRHFRKRRN

SwissProt top hitse value%identityAlignment
P85936 Protein DCL, chloroplastic (Fragment)4.3e-0486.36Show/hide
Query:  WVDWEDKILEDTVPLVGFVRMI
        WVDWED+IL+DTVPLV FVRMI
Subjt:  WVDWEDKILEDTVPLVGFVRMI

Q42463 Protein DCL, chloroplastic9.3e-6870Show/hide
Query:  ALRTGPDGTRIRSLEEYSSDLLRKPVVPPAKDLAGLSE--VEESGNDD----DGEEEDWVDWEDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTI
        A++TG +G  IRS    +++LLRKPV+    +    SE  V+E  +D+     G+ E WVDWED+ILEDTVPLVGFVRMILHS KY  GDRLSP+H++TI
Subjt:  ALRTGPDGTRIRSLEEYSSDLLRKPVVPPAKDLAGLSE--VEESGNDD----DGEEEDWVDWEDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTI

Query:  LDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLHAESFILRHFRKRRNN
        L RLLPYHPEC+KKIG G+DYITVGYHPDFE+SRCLFIVRKDGE VDFSYWKCIKGLIRKNYPL+A+SFILRHFRKRR N
Subjt:  LDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLHAESFILRHFRKRRNN

Q5D869 DNA-directed RNA polymerase V subunit 11.7e-2139.67Show/hide
Query:  EDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNY
        E ++L D  P++  +R I+H   Y  GD +S + +  +L+++L +HP+ E K+G G+D+ITV  H  F  SRC F+V  DG   DFSY K +   + K Y
Subjt:  EDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNY

Query:  PLHAESFILRHFRKRRNNFRR
        P  AE FI ++F K R +  R
Subjt:  PLHAESFILRHFRKRRNNFRR

Q8L557 Protein EMBRYO DEFECTIVE 5147.8e-0644.07Show/hide
Query:  ILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        +LD +   H E EKKIG GI    V  HP ++ SRC F+VR+D    DFS+ KC+  ++
Subjt:  ILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Q9C642 Protein DCL homolog, chloroplastic8.1e-7262.16Show/hide
Query:  MAMASVLKPPPFV-PYHSPNPSFFNSSSLILC--FPA--MNSFHPSIRALRTGPDGTRIRSLEEYSSDLLRKPVVPPAKDLAGLSEVEESGNDDDGEEED
        M++AS+    P   PY       F+ SS  LC  FP     S  P +RALRT  DG +I + E Y S+LLR+P +   +     SE EE   +++ E ++
Subjt:  MAMASVLKPPPFV-PYHSPNPSFFNSSSLILC--FPA--MNSFHPSIRALRTGPDGTRIRSLEEYSSDLLRKPVVPPAKDLAGLSEVEESGNDDDGEEED

Query:  WVDWEDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        +VDWEDKILE TVPLVGFVRMILHS KY + DRLSPEHE+TI++ LLPYHPECEKKIGCGIDYI VG+HPDFESSRC+FIVRKDGE+VDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLHAESFILRHFRKRRNN
        +K YPL+A+SFILRHFRKRR N
Subjt:  RKNYPLHAESFILRHFRKRRNN

Arabidopsis top hitse value%identityAlignment
AT1G45230.1 Protein of unknown function (DUF3223)5.8e-7362.16Show/hide
Query:  MAMASVLKPPPFV-PYHSPNPSFFNSSSLILC--FPA--MNSFHPSIRALRTGPDGTRIRSLEEYSSDLLRKPVVPPAKDLAGLSEVEESGNDDDGEEED
        M++AS+    P   PY       F+ SS  LC  FP     S  P +RALRT  DG +I + E Y S+LLR+P +   +     SE EE   +++ E ++
Subjt:  MAMASVLKPPPFV-PYHSPNPSFFNSSSLILC--FPA--MNSFHPSIRALRTGPDGTRIRSLEEYSSDLLRKPVVPPAKDLAGLSEVEESGNDDDGEEED

Query:  WVDWEDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        +VDWEDKILE TVPLVGFVRMILHS KY + DRLSPEHE+TI++ LLPYHPECEKKIGCGIDYI VG+HPDFESSRC+FIVRKDGE+VDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLHAESFILRHFRKRRNN
        +K YPL+A+SFILRHFRKRR N
Subjt:  RKNYPLHAESFILRHFRKRRNN

AT1G45230.2 Protein of unknown function (DUF3223)4.9e-7261.71Show/hide
Query:  MAMASVLKPPPFV-PYHSPNPSFFNSSSLILC--FPA--MNSFHPSIRALRTGPDGTRIRSLEEYSSDLLRKPVVPPAKDLAGLSEVEESGNDDDGEEED
        M++AS+    P   PY       F+ SS  LC  FP     S  P +RALRT  DG +I + E Y S+LLR+P +   +     SE EE   +++ E ++
Subjt:  MAMASVLKPPPFV-PYHSPNPSFFNSSSLILC--FPA--MNSFHPSIRALRTGPDGTRIRSLEEYSSDLLRKPVVPPAKDLAGLSEVEESGNDDDGEEED

Query:  WVDWEDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        +VDWEDKILE TVPLVGFVRMILHS KY + DRLSPEHE+TI++ LLPYHPECEKKIGCGIDYI V +HPDFESSRC+FIVRKDGE+VDFSYWKCIKGLI
Subjt:  WVDWEDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI

Query:  RKNYPLHAESFILRHFRKRRNN
        +K YPL+A+SFILRHFRKRR N
Subjt:  RKNYPLHAESFILRHFRKRRNN

AT2G40030.1 nuclear RNA polymerase D1B1.2e-2239.67Show/hide
Query:  EDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNY
        E ++L D  P++  +R I+H   Y  GD +S + +  +L+++L +HP+ E K+G G+D+ITV  H  F  SRC F+V  DG   DFSY K +   + K Y
Subjt:  EDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNY

Query:  PLHAESFILRHFRKRRNNFRR
        P  AE FI ++F K R +  R
Subjt:  PLHAESFILRHFRKRRNNFRR

AT3G46630.1 Protein of unknown function (DUF3223)1.5e-3347.73Show/hide
Query:  VEESGNDDDGEEEDWVDWEDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGE
        V+ S   +D +   W + E +IL D  P+    + ILHSD+Y  G+RL  E EK ++++LLPYHP  + KIGCG+D+I V  HP F  SRCLF+VR DG 
Subjt:  VEESGNDDDGEEEDWVDWEDKILEDTVPLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGE

Query:  LVDFSYWKCIKGLIRKNYPLHAESFILRHFRK
         +DFSY KC++  +R  YP HAE FI  HF++
Subjt:  LVDFSYWKCIKGLIRKNYPLHAESFILRHFRK

AT5G62440.1 Protein of unknown function (DUF3223)5.5e-0744.07Show/hide
Query:  ILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI
        +LD +   H E EKKIG GI    V  HP ++ SRC F+VR+D    DFS+ KC+  ++
Subjt:  ILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATGGCCATGGCGTCCGTTCTGAAGCCACCGCCATTTGTGCCCTATCACTCCCCAAATCCAAGCTTCTTCAACTCGTCGTCGCTGATCTTATGTTTTCCTGCTAT
GAATTCGTTTCACCCGTCCATTCGTGCCCTGAGGACTGGCCCTGATGGCACTCGAATTCGGAGCCTCGAAGAATATAGCTCCGATTTGCTGCGGAAACCGGTTGTTCCGC
CGGCGAAGGATTTGGCCGGATTATCGGAGGTTGAGGAGAGTGGAAATGACGATGACGGCGAGGAAGAGGATTGGGTTGATTGGGAGGACAAGATTTTGGAGGATACTGTT
CCGCTTGTTGGCTTTGTTAGGATGATTCTTCACTCTGATAAATATGGAAGTGGGGATAGGTTAAGCCCAGAGCACGAGAAAACAATTCTTGACAGGTTGCTTCCATATCA
TCCCGAGTGTGAGAAGAAGATTGGATGTGGGATTGATTATATCACGGTGGGATATCATCCTGATTTTGAAAGCTCAAGATGTTTATTCATAGTCAGAAAAGATGGAGAAT
TAGTTGATTTTTCATATTGGAAGTGCATCAAGGGTCTGATCAGAAAGAACTATCCTCTTCATGCAGAAAGCTTCATTCTTAGACATTTTCGGAAGCGTAGAAACAATTTT
CGCCGGTAA
mRNA sequenceShow/hide mRNA sequence
TACGGATTGAAGAGAAAATCTTGCAGAATCTCCAAAATCCAAAATCCATGAGAGATTGATGATAATATGAGTGACAGTTAACTGTTCTTCTTCTTCTTCCAATTTCTCTG
AAAAAATTTGCAGAAAATCATGCTCAGAAATCGCAGCCTACAATCTCATTCTCAATAGTTCCAAATCCAAGCTCAAGGGCATGGCCATGGCCATGGCGTCCGTTCTGAAG
CCACCGCCATTTGTGCCCTATCACTCCCCAAATCCAAGCTTCTTCAACTCGTCGTCGCTGATCTTATGTTTTCCTGCTATGAATTCGTTTCACCCGTCCATTCGTGCCCT
GAGGACTGGCCCTGATGGCACTCGAATTCGGAGCCTCGAAGAATATAGCTCCGATTTGCTGCGGAAACCGGTTGTTCCGCCGGCGAAGGATTTGGCCGGATTATCGGAGG
TTGAGGAGAGTGGAAATGACGATGACGGCGAGGAAGAGGATTGGGTTGATTGGGAGGACAAGATTTTGGAGGATACTGTTCCGCTTGTTGGCTTTGTTAGGATGATTCTT
CACTCTGATAAATATGGAAGTGGGGATAGGTTAAGCCCAGAGCACGAGAAAACAATTCTTGACAGGTTGCTTCCATATCATCCCGAGTGTGAGAAGAAGATTGGATGTGG
GATTGATTATATCACGGTGGGATATCATCCTGATTTTGAAAGCTCAAGATGTTTATTCATAGTCAGAAAAGATGGAGAATTAGTTGATTTTTCATATTGGAAGTGCATCA
AGGGTCTGATCAGAAAGAACTATCCTCTTCATGCAGAAAGCTTCATTCTTAGACATTTTCGGAAGCGTAGAAACAATTTTCGCCGGTAACGCGTGCAAGATCGGTTAATC
ATACTATTGTATCATTCTATTTCAGGAACTTCTTGAATAACAAAGCTTGAAATTAACCTACCAAGCTTGTGTGGTTCTCTTGCGTGTAATGATTTGAAATGTGCGATTAA
ATATGGATATAGGGTGAATGTATTAGATTTTTGCTTGAGGAAAGTGCTAGTAAAATTCAATTTTGTAAATCCTAATAGTACCTCTGGATTTCTTTAATCCATTTTTACAA
TCTAAATTATGGCTTAAGGTTTGGTTAGGGGTGTTAATTGATCGGTG
Protein sequenceShow/hide protein sequence
MAMAMASVLKPPPFVPYHSPNPSFFNSSSLILCFPAMNSFHPSIRALRTGPDGTRIRSLEEYSSDLLRKPVVPPAKDLAGLSEVEESGNDDDGEEEDWVDWEDKILEDTV
PLVGFVRMILHSDKYGSGDRLSPEHEKTILDRLLPYHPECEKKIGCGIDYITVGYHPDFESSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLHAESFILRHFRKRRNNF
RR