CuGenDBv2

Gene ID	Sed0006840
Organism	Sechium edule (Chayote v1)
Description	IBB domain-containing protein
Genome location	LG05:40526978..40527924
RNA-Seq Expression	Sed0006840
Synteny	Sed0006840
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6605444.1 hypothetical protein SDJN03_02761, partial [Cucurbita argyrosperma subsp. sororia]

2.0e-40

69.23

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Query:  MATITASSSLSLPIFLSTSKP--YNLPSLRSSSPP-----NPSRRPTSLLLNPLPPTGISLRRRLHAVPEQTLATESAGLVEQSQEIVSTG-DGVSSVIS
        MAT T S+SLSLPIFLS+S P  Y LPS RSSS       N SRRP +L+L    P   S+ RRLHAV E+TLA+ESA LVE+SQEI STG DGVS++IS
Subjt:  MATITASSSLSLPIFLSTSKP--YNLPSLRSSSPP-----NPSRRPTSLLLNPLPPTGISLRRRLHAVPEQTLATESAGLVEQSQEIVSTG-DGVSSVIS

Query:  ALLFVAFLGLSILTIGVIYIAVTDFLQKREKEKFEKEEAAASKKSGKKKVKVKPRSGPRGFGQKIEEDE
         LLFVAF+GLS+LTIGVIYIAVTDFLQKREKEKFEKEEAA  K   KKKVKVK ++GPRGFGQK+E++E
Subjt:  ALLFVAFLGLSILTIGVIYIAVTDFLQKREKEKFEKEEAAASKKSGKKKVKVKPRSGPRGFGQKIEEDE

XP_022148488.1 uncharacterized protein LOC111017113 [Momordica charantia]

1.2e-40

72.62

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Query:  MATITASSSLSLPIFLST--SKPYNLPSLRSSSPPN-PSRRPTSLLLNPL---PPTGISLRRRLHAVPEQTLATESAGLVEQSQEIVSTG-DGVSSVISA
        MAT T S+SLSLPIFLST   KP+    LRSSS PN  SRRP  L+LNPL      G S+ RRLHA  EQTLA+ESA LVE+SQEI S+G DGVS++ISA
Subjt:  MATITASSSLSLPIFLST--SKPYNLPSLRSSSPPN-PSRRPTSLLLNPL---PPTGISLRRRLHAVPEQTLATESAGLVEQSQEIVSTG-DGVSSVISA

Query:  LLFVAFLGLSILTIGVIYIAVTDFLQKREKEKFEKEEAAASKKSGKKKVKVKPRSGPRGFGQKIEEDE
        LLFVAF+GLSILTIGVIYIAVTDFLQKREKEKFEK E A +KKSGKKK KV+ R+GPRGFGQKIEE+E
Subjt:  LLFVAFLGLSILTIGVIYIAVTDFLQKREKEKFEKEEAAASKKSGKKKVKVKPRSGPRGFGQKIEEDE

XP_022947295.1 uncharacterized protein LOC111451198 [Cucurbita moschata]

4.1e-41

69.82

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Query:  MATITASSSLSLPIFLSTSKP--YNLPSLRSSSPP-----NPSRRPTSLLLNPLPPTGISLRRRLHAVPEQTLATESAGLVEQSQEIVSTG-DGVSSVIS
        MAT T S+SLSLPIFLS+S P  Y LPSLRSSS       N SRRP +L+L    P   S+ RRLHAV E+TLA+ESA LVE+SQEI STG DGVS++IS
Subjt:  MATITASSSLSLPIFLSTSKP--YNLPSLRSSSPP-----NPSRRPTSLLLNPLPPTGISLRRRLHAVPEQTLATESAGLVEQSQEIVSTG-DGVSSVIS

Query:  ALLFVAFLGLSILTIGVIYIAVTDFLQKREKEKFEKEEAAASKKSGKKKVKVKPRSGPRGFGQKIEEDE
         LLFVAF+GLS+LTIGVIYIAVTDFLQKREKEKFEKEEAA  K   KKKVKVK ++GPRGFGQK+E++E
Subjt:  ALLFVAFLGLSILTIGVIYIAVTDFLQKREKEKFEKEEAAASKKSGKKKVKVKPRSGPRGFGQKIEEDE

XP_023007015.1 uncharacterized protein LOC111499635 [Cucurbita maxima]

4.5e-40

68.64

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Query:  MATITASSSLSLPIFLSTSKP--YNLPSLRSSSPP-----NPSRRPTSLLLNPLPPTGISLRRRLHAVPEQTLATESAGLVEQSQEIVSTG-DGVSSVIS
        MAT T S+SLSLPI LS+S P  Y LPSLRSSS       N SRRP +L+L    P   S+ RRLHA+ E+TLA+ESA LVE+SQEI STG DGVS++IS
Subjt:  MATITASSSLSLPIFLSTSKP--YNLPSLRSSSPP-----NPSRRPTSLLLNPLPPTGISLRRRLHAVPEQTLATESAGLVEQSQEIVSTG-DGVSSVIS

Query:  ALLFVAFLGLSILTIGVIYIAVTDFLQKREKEKFEKEEAAASKKSGKKKVKVKPRSGPRGFGQKIEEDE
         LLFVAF+GLS+LTIGVIYIAVTDFLQKREKEKFEKEEAA  K   KKKVKVK ++GPRGFGQK+E++E
Subjt:  ALLFVAFLGLSILTIGVIYIAVTDFLQKREKEKFEKEEAAASKKSGKKKVKVKPRSGPRGFGQKIEEDE

XP_023532311.1 uncharacterized protein LOC111794502 [Cucurbita pepo subsp. pepo]

3.5e-40

68.64

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Query:  MATITASSSLSLPIFLSTSKP--YNLPSLRSSSPP-----NPSRRPTSLLLNPLPPTGISLRRRLHAVPEQTLATESAGLVEQSQEIVSTG-DGVSSVIS
        MAT T S+SLSLPIFLS+S P  Y LPSLRSSS       N SRRP +L+L        S+ RRLHA+ E+TLA+ESA LVE+SQEI STG DGVS++IS
Subjt:  MATITASSSLSLPIFLSTSKP--YNLPSLRSSSPP-----NPSRRPTSLLLNPLPPTGISLRRRLHAVPEQTLATESAGLVEQSQEIVSTG-DGVSSVIS

Query:  ALLFVAFLGLSILTIGVIYIAVTDFLQKREKEKFEKEEAAASKKSGKKKVKVKPRSGPRGFGQKIEEDE
         LLFVAF+GLS+LTIGVIYIAVTDFLQKREKEKFEKEEAA  K   KK+VKVK R+GPRGFGQK+E++E
Subjt:  ALLFVAFLGLSILTIGVIYIAVTDFLQKREKEKFEKEEAAASKKSGKKKVKVKPRSGPRGFGQKIEEDE

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CM77 uncharacterized protein LOC103502067

3.7e-32

63.74

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Query:  TASSSLSLPIFLSTSKPYNLPSLR-SSSPPNPSR-----RPTSLLLNPLPPT---GISLRRRLHAVPEQTLATESAGLV-EQSQEIV--STGDGVSSVIS
        T S SLSLPI LS+S    LP+LR SSSPP PS      RPT  LLNPL       +S      A  EQTLA++SA LV E+SQ+IV  +  DGVS++IS
Subjt:  TASSSLSLPIFLSTSKPYNLPSLR-SSSPPNPSR-----RPTSLLLNPLPPT---GISLRRRLHAVPEQTLATESAGLV-EQSQEIV--STGDGVSSVIS

Query:  ALLFVAFLGLSILTIGVIYIAVTDFLQKREKEKFEKEEAAASKKSGKKKVKVKPRSGPRGFGQKIEEDELD
         LLF+AF+GLSILTIGVIYI VTDFLQKREKEKFEKEEA   KKSGKKK KV+ R GPRGFGQK+EE+E D
Subjt:  ALLFVAFLGLSILTIGVIYIAVTDFLQKREKEKFEKEEAAASKKSGKKKVKVKPRSGPRGFGQKIEEDELD

A0A5A7V864 Uncharacterized protein

3.7e-32

63.74

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Query:  TASSSLSLPIFLSTSKPYNLPSLR-SSSPPNPSR-----RPTSLLLNPLPPT---GISLRRRLHAVPEQTLATESAGLV-EQSQEIV--STGDGVSSVIS
        T S SLSLPI LS+S    LP+LR SSSPP PS      RPT  LLNPL       +S      A  EQTLA++SA LV E+SQ+IV  +  DGVS++IS
Subjt:  TASSSLSLPIFLSTSKPYNLPSLR-SSSPPNPSR-----RPTSLLLNPLPPT---GISLRRRLHAVPEQTLATESAGLV-EQSQEIV--STGDGVSSVIS

Query:  ALLFVAFLGLSILTIGVIYIAVTDFLQKREKEKFEKEEAAASKKSGKKKVKVKPRSGPRGFGQKIEEDELD
         LLF+AF+GLSILTIGVIYI VTDFLQKREKEKFEKEEA   KKSGKKK KV+ R GPRGFGQK+EE+E D
Subjt:  ALLFVAFLGLSILTIGVIYIAVTDFLQKREKEKFEKEEAAASKKSGKKKVKVKPRSGPRGFGQKIEEDELD

A0A6J1D484 uncharacterized protein LOC111017113

5.8e-41

72.62

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Query:  MATITASSSLSLPIFLST--SKPYNLPSLRSSSPPN-PSRRPTSLLLNPL---PPTGISLRRRLHAVPEQTLATESAGLVEQSQEIVSTG-DGVSSVISA
        MAT T S+SLSLPIFLST   KP+    LRSSS PN  SRRP  L+LNPL      G S+ RRLHA  EQTLA+ESA LVE+SQEI S+G DGVS++ISA
Subjt:  MATITASSSLSLPIFLST--SKPYNLPSLRSSSPPN-PSRRPTSLLLNPL---PPTGISLRRRLHAVPEQTLATESAGLVEQSQEIVSTG-DGVSSVISA

Query:  LLFVAFLGLSILTIGVIYIAVTDFLQKREKEKFEKEEAAASKKSGKKKVKVKPRSGPRGFGQKIEEDE
        LLFVAF+GLSILTIGVIYIAVTDFLQKREKEKFEK E A +KKSGKKK KV+ R+GPRGFGQKIEE+E
Subjt:  LLFVAFLGLSILTIGVIYIAVTDFLQKREKEKFEKEEAAASKKSGKKKVKVKPRSGPRGFGQKIEEDE

A0A6J1G6G9 uncharacterized protein LOC111451198

2.0e-41

69.82

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Query:  MATITASSSLSLPIFLSTSKP--YNLPSLRSSSPP-----NPSRRPTSLLLNPLPPTGISLRRRLHAVPEQTLATESAGLVEQSQEIVSTG-DGVSSVIS
        MAT T S+SLSLPIFLS+S P  Y LPSLRSSS       N SRRP +L+L    P   S+ RRLHAV E+TLA+ESA LVE+SQEI STG DGVS++IS
Subjt:  MATITASSSLSLPIFLSTSKP--YNLPSLRSSSPP-----NPSRRPTSLLLNPLPPTGISLRRRLHAVPEQTLATESAGLVEQSQEIVSTG-DGVSSVIS

Query:  ALLFVAFLGLSILTIGVIYIAVTDFLQKREKEKFEKEEAAASKKSGKKKVKVKPRSGPRGFGQKIEEDE
         LLFVAF+GLS+LTIGVIYIAVTDFLQKREKEKFEKEEAA  K   KKKVKVK ++GPRGFGQK+E++E
Subjt:  ALLFVAFLGLSILTIGVIYIAVTDFLQKREKEKFEKEEAAASKKSGKKKVKVKPRSGPRGFGQKIEEDE

A0A6J1L1T3 uncharacterized protein LOC111499635

2.2e-40

68.64

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Query:  MATITASSSLSLPIFLSTSKP--YNLPSLRSSSPP-----NPSRRPTSLLLNPLPPTGISLRRRLHAVPEQTLATESAGLVEQSQEIVSTG-DGVSSVIS
        MAT T S+SLSLPI LS+S P  Y LPSLRSSS       N SRRP +L+L    P   S+ RRLHA+ E+TLA+ESA LVE+SQEI STG DGVS++IS
Subjt:  MATITASSSLSLPIFLSTSKP--YNLPSLRSSSPP-----NPSRRPTSLLLNPLPPTGISLRRRLHAVPEQTLATESAGLVEQSQEIVSTG-DGVSSVIS

Query:  ALLFVAFLGLSILTIGVIYIAVTDFLQKREKEKFEKEEAAASKKSGKKKVKVKPRSGPRGFGQKIEEDE
         LLFVAF+GLS+LTIGVIYIAVTDFLQKREKEKFEKEEAA  K   KKKVKVK ++GPRGFGQK+E++E
Subjt:  ALLFVAFLGLSILTIGVIYIAVTDFLQKREKEKFEKEEAAASKKSGKKKVKVKPRSGPRGFGQKIEEDE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G29180.1 unknown protein

1.3e-21

54.55

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Query:  RLHAVPEQ-TLATESAGLVEQSQEIVSTG--DGVSSVISALLFVAFLGLSILTIGVIYIAVTDFLQKREKEKFEKEEAAASKKSGKKKVKVKPRSGPRGF
        R+ A PE+ +    S+     S  +VS+G  DGV+ +I  LLFVAFL L++LTIGV+YI VT+FL KRE+EKFEK+EAA   K G KK  ++ R+GPRGF
Subjt:  RLHAVPEQ-TLATESAGLVEQSQEIVSTG--DGVSSVISALLFVAFLGLSILTIGVIYIAVTDFLQKREKEKFEKEEAAASKKSGKKKVKVKPRSGPRGF

Query:  GQKIEEDELD
        GQKIE+D++D
Subjt:  GQKIEEDELD

Sequences

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CDS sequence

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ATGAGAGGCATGGCCACCATCACTGCATCCTCTTCTCTATCTCTTCCCATTTTCCTCTCCACCTCCAAACCCTACAACCTTCCGTCTCTCCGCTCCTCCTCTCCGCCAAA
TCCCTCCCGCCGGCCAACGTCTCTCCTCCTCAATCCGCTTCCTCCAACAGGAATCTCACTCCGGCGGCGCCTCCACGCCGTTCCTGAACAAACTCTAGCCACGGAATCCG
CCGGGCTGGTGGAGCAATCGCAGGAGATCGTATCCACCGGCGACGGCGTATCCAGCGTCATCTCCGCTCTTCTTTTCGTCGCTTTCCTCGGTCTATCAATCCTCACAATC
GGGGTAATCTACATTGCTGTGACGGATTTCTTGCAGAAGAGGGAGAAGGAGAAGTTTGAGAAGGAAGAAGCGGCGGCGAGTAAGAAGAGTGGGAAGAAGAAGGTGAAGGT
GAAACCGAGATCTGGACCGAGAGGATTTGGCCAGAAGATTGAAGAAGATGAACTCGATTGA

mRNA sequence

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GGCAGGTGTTGTATTTTTATTTTAATTAAAATATATTTTAGAAATTTGGAAAGGAAGAGAGTGAAAATACCGGTTTGACCCTTAGCGAGGAGGAAGCGATCTGGACGGGG
CAGTGGCAGTGAAGCAGATGAGAGGCATGGCCACCATCACTGCATCCTCTTCTCTATCTCTTCCCATTTTCCTCTCCACCTCCAAACCCTACAACCTTCCGTCTCTCCGC
TCCTCCTCTCCGCCAAATCCCTCCCGCCGGCCAACGTCTCTCCTCCTCAATCCGCTTCCTCCAACAGGAATCTCACTCCGGCGGCGCCTCCACGCCGTTCCTGAACAAAC
TCTAGCCACGGAATCCGCCGGGCTGGTGGAGCAATCGCAGGAGATCGTATCCACCGGCGACGGCGTATCCAGCGTCATCTCCGCTCTTCTTTTCGTCGCTTTCCTCGGTC
TATCAATCCTCACAATCGGGGTAATCTACATTGCTGTGACGGATTTCTTGCAGAAGAGGGAGAAGGAGAAGTTTGAGAAGGAAGAAGCGGCGGCGAGTAAGAAGAGTGGG
AAGAAGAAGGTGAAGGTGAAACCGAGATCTGGACCGAGAGGATTTGGCCAGAAGATTGAAGAAGATGAACTCGATTGATTGTTCTTCTCAATCGGTATGACAATGCAATT
TCTTCAACATTCTTGTTTTTCCCTATCGAATTTTACATCGATTCTGATGAATTTGCTTCAATTTCTGAGTTAGGGCATCCTAAGAATTATTTCTCTCGTGAATTTTTAGA
TTCATTTTTCGTTGAATGTTATCTCTCACTTGATATTTCTGTGATTGTTTTTTTGTGTTTTCCAGA

Protein sequence

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MRGMATITASSSLSLPIFLSTSKPYNLPSLRSSSPPNPSRRPTSLLLNPLPPTGISLRRRLHAVPEQTLATESAGLVEQSQEIVSTGDGVSSVISALLFVAFLGLSILTI
GVIYIAVTDFLQKREKEKFEKEEAAASKKSGKKKVKVKPRSGPRGFGQKIEEDELD

Sed0006840 (gene) of Chayote v1 genome