CuGenDBv2

Gene ID	Sed0006875
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Genome location	LG05:26867134..26869247
RNA-Seq Expression	Sed0006875
Synteny	Sed0006875
Gene Ontology terms	GO:0005840 - ribosome (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_011651806.1 uncharacterized protein LOC101216392 [Cucumis sativus]

1.8e-36

87.5

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Query:  MVLESILGSPHRRSPQFRRQFPANELGSWSTLFNRHRFLLTALALLTFLCTIYLYFAITLGATESSSSCSGLTGAQKEICRLEQAKASLAKGKLKF
        MVL+SIL SPHRRSP FR+QFPANELGSWSTLF RHRFLLTALALLTFLCTIYLYFAITLGAT  +SSCSGLTG Q+E+CRLE AKASLAKGKLKF
Subjt:  MVLESILGSPHRRSPQFRRQFPANELGSWSTLFNRHRFLLTALALLTFLCTIYLYFAITLGATESSSSCSGLTGAQKEICRLEQAKASLAKGKLKF

XP_016902957.1 PREDICTED: uncharacterized protein LOC103501213 [Cucumis melo]

6.8e-36

86.46

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Query:  MVLESILGSPHRRSPQFRRQFPANELGSWSTLFNRHRFLLTALALLTFLCTIYLYFAITLGATESSSSCSGLTGAQKEICRLEQAKASLAKGKLKF
        MVL+SIL SPHRRSP FR+QFPANELGSWSTLF RHRFLLTALALLTFLCTIYLYFAITLGAT  +SSCSGLTG Q+E+CRLE AKASLA GKLKF
Subjt:  MVLESILGSPHRRSPQFRRQFPANELGSWSTLFNRHRFLLTALALLTFLCTIYLYFAITLGATESSSSCSGLTGAQKEICRLEQAKASLAKGKLKF

XP_022153454.1 uncharacterized protein LOC111020959 [Momordica charantia]

3.6e-37

88.54

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Query:  MVLESILGSPHRRSPQFRRQFPANELGSWSTLFNRHRFLLTALALLTFLCTIYLYFAITLGATESSSSCSGLTGAQKEICRLEQAKASLAKGKLKF
        MVL+SIL SPHRRSP FR+QFPANELGSWS LFNRHRFLLTALALLTFLCTIYLYFAITLGAT  +SSCSGLTGAQKE+CR+E AKASLAKGKLKF
Subjt:  MVLESILGSPHRRSPQFRRQFPANELGSWSTLFNRHRFLLTALALLTFLCTIYLYFAITLGATESSSSCSGLTGAQKEICRLEQAKASLAKGKLKF

XP_022948745.1 uncharacterized protein LOC111452323 [Cucurbita moschata]

4.4e-35

86.46

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Query:  MVLESILGSPHRRSPQFRRQFPANELGSWSTLFNRHRFLLTALALLTFLCTIYLYFAITLGATESSSSCSGLTGAQKEICRLEQAKASLAKGKLKF
        MVL+SIL SP RR+P FR+QFPANELGSWSTLFNRHRFLLTALALLT LCTIYLYFAITLGAT  +SSCSGLTGAQKE+C LE AKASLAKGKLKF
Subjt:  MVLESILGSPHRRSPQFRRQFPANELGSWSTLFNRHRFLLTALALLTFLCTIYLYFAITLGATESSSSCSGLTGAQKEICRLEQAKASLAKGKLKF

XP_038903507.1 uncharacterized protein LOC120090090 [Benincasa hispida]

6.8e-36

85.42

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Query:  MVLESILGSPHRRSPQFRRQFPANELGSWSTLFNRHRFLLTALALLTFLCTIYLYFAITLGATESSSSCSGLTGAQKEICRLEQAKASLAKGKLKF
        MVL+SIL SPHRRSP FR+QFPANELGSWSTLF RHRFLLTALALLTFLCTIYLYFA+TLGAT  +SSCSGLTG Q+E+CRLE AKASL KGKLKF
Subjt:  MVLESILGSPHRRSPQFRRQFPANELGSWSTLFNRHRFLLTALALLTFLCTIYLYFAITLGATESSSSCSGLTGAQKEICRLEQAKASLAKGKLKF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L9L6 Uncharacterized protein

8.7e-37

87.5

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Query:  MVLESILGSPHRRSPQFRRQFPANELGSWSTLFNRHRFLLTALALLTFLCTIYLYFAITLGATESSSSCSGLTGAQKEICRLEQAKASLAKGKLKF
        MVL+SIL SPHRRSP FR+QFPANELGSWSTLF RHRFLLTALALLTFLCTIYLYFAITLGAT  +SSCSGLTG Q+E+CRLE AKASLAKGKLKF
Subjt:  MVLESILGSPHRRSPQFRRQFPANELGSWSTLFNRHRFLLTALALLTFLCTIYLYFAITLGATESSSSCSGLTGAQKEICRLEQAKASLAKGKLKF

A0A1S4E410 uncharacterized protein LOC103501213

3.3e-36

86.46

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Query:  MVLESILGSPHRRSPQFRRQFPANELGSWSTLFNRHRFLLTALALLTFLCTIYLYFAITLGATESSSSCSGLTGAQKEICRLEQAKASLAKGKLKF
        MVL+SIL SPHRRSP FR+QFPANELGSWSTLF RHRFLLTALALLTFLCTIYLYFAITLGAT  +SSCSGLTG Q+E+CRLE AKASLA GKLKF
Subjt:  MVLESILGSPHRRSPQFRRQFPANELGSWSTLFNRHRFLLTALALLTFLCTIYLYFAITLGATESSSSCSGLTGAQKEICRLEQAKASLAKGKLKF

A0A5D3DCR7 Uncharacterized protein

3.3e-36

86.46

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Query:  MVLESILGSPHRRSPQFRRQFPANELGSWSTLFNRHRFLLTALALLTFLCTIYLYFAITLGATESSSSCSGLTGAQKEICRLEQAKASLAKGKLKF
        MVL+SIL SPHRRSP FR+QFPANELGSWSTLF RHRFLLTALALLTFLCTIYLYFAITLGAT  +SSCSGLTG Q+E+CRLE AKASLA GKLKF
Subjt:  MVLESILGSPHRRSPQFRRQFPANELGSWSTLFNRHRFLLTALALLTFLCTIYLYFAITLGATESSSSCSGLTGAQKEICRLEQAKASLAKGKLKF

A0A6J1DJ35 uncharacterized protein LOC111020959

1.7e-37

88.54

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Query:  MVLESILGSPHRRSPQFRRQFPANELGSWSTLFNRHRFLLTALALLTFLCTIYLYFAITLGATESSSSCSGLTGAQKEICRLEQAKASLAKGKLKF
        MVL+SIL SPHRRSP FR+QFPANELGSWS LFNRHRFLLTALALLTFLCTIYLYFAITLGAT  +SSCSGLTGAQKE+CR+E AKASLAKGKLKF
Subjt:  MVLESILGSPHRRSPQFRRQFPANELGSWSTLFNRHRFLLTALALLTFLCTIYLYFAITLGATESSSSCSGLTGAQKEICRLEQAKASLAKGKLKF

A0A6J1GA22 uncharacterized protein LOC111452323

2.1e-35

86.46

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Query:  MVLESILGSPHRRSPQFRRQFPANELGSWSTLFNRHRFLLTALALLTFLCTIYLYFAITLGATESSSSCSGLTGAQKEICRLEQAKASLAKGKLKF
        MVL+SIL SP RR+P FR+QFPANELGSWSTLFNRHRFLLTALALLT LCTIYLYFAITLGAT  +SSCSGLTGAQKE+C LE AKASLAKGKLKF
Subjt:  MVLESILGSPHRRSPQFRRQFPANELGSWSTLFNRHRFLLTALALLTFLCTIYLYFAITLGATESSSSCSGLTGAQKEICRLEQAKASLAKGKLKF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G16170.1 unknown protein

1.2e-22

59.38

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Query:  MVLESILGSPHRRSPQFRRQFPANELGSWSTLFNRHRFLLTALALLTFLCTIYLYFAITLGATESSSSCSGLTGAQKEICRLEQAKASLAKGKLKF
        MVL+ ++ SP RR    ++Q+  +ELGSWSTL  RH++LLTALALL FLCT+YLYFA+TLGA    SSC GLTG  K +C+L+  +A L+KGKLKF
Subjt:  MVLESILGSPHRRSPQFRRQFPANELGSWSTLFNRHRFLLTALALLTFLCTIYLYFAITLGATESSSSCSGLTGAQKEICRLEQAKASLAKGKLKF

AT1G79660.1 unknown protein

2.5e-20

54.17

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Query:  MVLESILGSPHRRSPQFRRQFPANELGSWSTLFNRHRFLLTALALLTFLCTIYLYFAITLGATESSSSCSGLTGAQKEICRLEQAKASLAKGKLKF
        MVL+ I+ SP RR    ++Q+  ++LGS ST+  RHRFLLTA+ LL FLCTIY+YFA+TLGA      CSG+TG  K +C++E  +AS + GKLKF
Subjt:  MVLESILGSPHRRSPQFRRQFPANELGSWSTLFNRHRFLLTALALLTFLCTIYLYFAITLGATESSSSCSGLTGAQKEICRLEQAKASLAKGKLKF

Sequences

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CDS sequence

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ATGGTTCTTGAAAGCATTTTAGGTTCTCCTCATAGGAGGTCCCCGCAATTTCGAAGGCAGTTTCCTGCAAATGAGTTAGGCAGTTGGTCGACTCTCTTTAACCGACATCG
CTTCCTCTTAACCGCGCTGGCACTCTTGACATTCCTTTGCACAATCTACCTTTACTTTGCTATCACTTTAGGGGCTACTGAATCGTCGTCGTCTTGCTCGGGTTTGACTG
GAGCTCAGAAAGAAATCTGTCGTCTGGAGCAGGCTAAAGCTTCTCTGGCTAAAGGCAAGTTGAAATTTGATACGTAG

mRNA sequence

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TTTGTCAATAAAAAAGAAAAGAAAAGAAAAGAAGATATTTATATTTATAGAAAAAATAAAAAGAGAGTTAAATAAAGAAGGCGAAAGAGCGTTGTGCCTTACTAAAAGCG
TGATCCACGGACTAAAAGCTCGTACATCATTTCATTTGCGCGCTCTCTCTAAGGAATCGAATTCTCATCTCCATTCATCCAATTTGATACAACTCTGTATTTGGTGCTAA
GCTTCAGAGCACGGAGAAAGATTGGAGCTCTAGAACATGGTTCTTGAAAGCATTTTAGGTTCTCCTCATAGGAGGTCCCCGCAATTTCGAAGGCAGTTTCCTGCAAATGA
GTTAGGCAGTTGGTCGACTCTCTTTAACCGACATCGCTTCCTCTTAACCGCGCTGGCACTCTTGACATTCCTTTGCACAATCTACCTTTACTTTGCTATCACTTTAGGGG
CTACTGAATCGTCGTCGTCTTGCTCGGGTTTGACTGGAGCTCAGAAAGAAATCTGTCGTCTGGAGCAGGCTAAAGCTTCTCTGGCTAAAGGCAAGTTGAAATTTGATACG
TAGGGAGCTTGAGGTACAAAATCTTCACATATATTGGTTTTTTTTTTCTTGGTGGGATCTGTATTTATAAATTATTATACATCAAAAGTTAATTCATCCATTTGGATTCA
TACATATAGCTTACAAAGTGTAGCAGAATGTCATTAACCATGGCTTCCTTGCATTAATTTGTTTTTTTTTTTGTTCTTTGTTATAATGGGTTTGTATTAAAACTTCAATC
ACTTATTGCTGTTGGGACAATAATGGATGGGAACTAATGTCCTTACCCTATCTTATTTTTGCTACACC

Protein sequence

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MVLESILGSPHRRSPQFRRQFPANELGSWSTLFNRHRFLLTALALLTFLCTIYLYFAITLGATESSSSCSGLTGAQKEICRLEQAKASLAKGKLKFDT

Sed0006875 (gene) of Chayote v1 genome