; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0006894 (gene) of Chayote v1 genome

Gene IDSed0006894
OrganismSechium edule (Chayote v1)
Descriptionpentatricopeptide repeat-containing protein At1g62350
Genome locationLG08:22304237..22308757
RNA-Seq ExpressionSed0006894
SyntenySed0006894
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044795 - Pentatricopeptide repeat-containing protein THA8L-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588226.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]1.2e-12491.37Show/hide
Query:  MLRFAPNLVRRISNSATSTIPFHRFPPHTFFEHDQWETQWLLRFITCSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDL
        MLRFAPNL+RR SNSATSTI  +RF   TFFEH + + Q LLRFIT SASSPSLSIWRRKKEMGKEGLIVVKELKR+QSNLIRLDRFISSHVSRLLKSDL
Subjt:  MLRFAPNLVRRISNSATSTIPFHRFPPHTFFEHDQWETQWLLRFITCSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNQVSLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQSPDR
        VAVLVELQRQNQV LCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVW+DLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIY EMRQSPDR
Subjt:  VAVLVELQRQNQVSLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQSPDR

Query:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDSRKSAR
        PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDED  KS R
Subjt:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDSRKSAR

KAG7022139.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-12490.98Show/hide
Query:  MLRFAPNLVRRISNSATSTIPFHRFPPHTFFEHDQWETQWLLRFITCSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDL
        MLRFAPNL+RR SNSATSTI  +RF   TFFEH + + Q LLRFIT SASSPSLSIWRRKKEMGKEGLIVVKELKR+QSNLIRLDRFISSHVSRLLKSDL
Subjt:  MLRFAPNLVRRISNSATSTIPFHRFPPHTFFEHDQWETQWLLRFITCSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNQVSLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQSPDR
        VAVLVELQRQNQV LCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVW+DLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIY EMRQSPDR
Subjt:  VAVLVELQRQNQVSLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQSPDR

Query:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDSRKSAR
        PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDED  KS +
Subjt:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDSRKSAR

XP_022930047.1 pentatricopeptide repeat-containing protein At1g62350 [Cucurbita moschata]1.5e-12290.2Show/hide
Query:  MLRFAPNLVRRISNSATSTIPFHRFPPHTFFEHDQWETQWLLRFITCSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDL
        MLRFAPNL+RR SNSATSTI  +R    TFFEH + + Q LLRFIT SASSPSLSIWRRKKEMGKEGLIVVKELKR+QSNLIRLDRFISSHVSRLLKSDL
Subjt:  MLRFAPNLVRRISNSATSTIPFHRFPPHTFFEHDQWETQWLLRFITCSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNQVSLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQSPDR
        VAVLVELQRQNQV LCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVW+DLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIY EMRQSPDR
Subjt:  VAVLVELQRQNQVSLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQSPDR

Query:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDSRKSAR
        PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDE   KS +
Subjt:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDSRKSAR

XP_022966084.1 pentatricopeptide repeat-containing protein At1g62350 [Cucurbita maxima]3.5e-12491.37Show/hide
Query:  MLRFAPNLVRRISNSATSTIPFHRFPPHTFFEHDQWETQWLLRFITCSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDL
        MLRFAPNL+RRISNSATSTI  +RF   TFFEH + + Q LLRFIT SASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDL
Subjt:  MLRFAPNLVRRISNSATSTIPFHRFPPHTFFEHDQWETQWLLRFITCSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNQVSLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQSPDR
        VAVLVELQRQNQV LCMKLYNVVRKEVWYRPDMFFYRDML MLAKNKRVEETKQVW+DLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIY EMRQSPDR
Subjt:  VAVLVELQRQNQVSLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQSPDR

Query:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDSRKSAR
        PLSLPFRVILKGLVPYPELREQV+DDFLELFPDMIVYDPPEDLFEEDED  KS R
Subjt:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDSRKSAR

XP_023531705.1 pentatricopeptide repeat-containing protein At1g62350 [Cucurbita pepo subsp. pepo]1.7e-12390.2Show/hide
Query:  MLRFAPNLVRRISNSATSTIPFHRFPPHTFFEHDQWETQWLLRFITCSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDL
        MLRFAPNL+RR SN ATSTI  +RF   TFFEH + + Q LLRFIT SASSPSLS+WRRKKEMGKEGLIVVKELKR+QSNLIRLDRFISSHVSRLLKSDL
Subjt:  MLRFAPNLVRRISNSATSTIPFHRFPPHTFFEHDQWETQWLLRFITCSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNQVSLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQSPDR
        VAVLVELQRQNQV LCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVW+DLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIY EMRQSPDR
Subjt:  VAVLVELQRQNQVSLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQSPDR

Query:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDSRKSAR
        PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDED  KS +
Subjt:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDSRKSAR

TrEMBL top hitse value%identityAlignment
A0A1S3BQ11 pentatricopeptide repeat-containing protein At1g623502.0e-11786.96Show/hide
Query:  MLRFAPNLVRRISNSATSTIPFHRFPPHTFFEHDQWETQWLLRFITCSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDL
        MLR APNL+R+IS+S  S+ PFHRF   TF   D  + Q LLRFI  SASSPSLSIWRRKKEMGKEGLIVVKELKRLQSN IRLDRFISSHVSRLLKSDL
Subjt:  MLRFAPNLVRRISNSATSTIPFHRFPPHTFFEHDQWETQWLLRFITCSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNQVSLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQSPDR
        VAVLVELQRQN V LCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVW+DLK EGVLFDQHTFGDI+RAYLDNAM SEAMDIY EMR+SPDR
Subjt:  VAVLVELQRQNQVSLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQSPDR

Query:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDSRKS
        PLSLPFRVILKGL+PYPELREQVKDDFLELFPDMIVYDPPEDLFEEDED  KS
Subjt:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDSRKS

A0A2I4F1J6 pentatricopeptide repeat-containing protein At1g623501.3e-9771.81Show/hide
Query:  MLRFAPNLVRRISNSATSTIPFHRFPPH-------TFFEHDQWETQWLLRFITCSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVS
        MLR A NL R+ S S T+ +P   F P+       TF ++ Q   +W LR++  SASSPSLSIWRR+KEMGKEGLIV KELKRL+ N +RLDRFI SHVS
Subjt:  MLRFAPNLVRRISNSATSTIPFHRFPPH-------TFFEHDQWETQWLLRFITCSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVS

Query:  RLLKSDLVAVLVELQRQNQVSLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNE
        RLLKSDL+AVL E QRQ+Q+ LCMKLY+VVRKE+WYRPDM+FYRDMLMMLA+NK+V+E KQVW+DLK E VLFDQHTFGDI+RA+LDN +PSEAMDIY+E
Subjt:  RLLKSDLVAVLVELQRQNQVSLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNE

Query:  MRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDSRK
        MR SPD P+SLPFRVILKGL+PYPELRE++KDDFLELFPDM+VYDPPEDLFE  ED RK
Subjt:  MRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDSRK

A0A6J1DGX4 pentatricopeptide repeat-containing protein At1g623507.6e-11785.83Show/hide
Query:  MLRFAPNLVRRISN--SATSTIPFHRFPPHTFFEHDQWETQWLLRFITCSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKS
        MLR  PNL+RR  N  + T+TIPFH   P TFF+ DQ + Q L RFIT SASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKS
Subjt:  MLRFAPNLVRRISN--SATSTIPFHRFPPHTFFEHDQWETQWLLRFITCSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKS

Query:  DLVAVLVELQRQNQVSLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQSP
        DLVAVLVELQRQ QV LCMKLYNVVRKEVWYRPDMFFYRDMLMML+KNK+VEETKQVWQDLK E VLFDQHTFGDI+RAYLDN MPSEAMDIY EMRQSP
Subjt:  DLVAVLVELQRQNQVSLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQSP

Query:  DRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDSRK
        DRPLSLPFRVILKGL+PYPELREQ+KDDFLELFPDMIVYDPPEDLFEEDED ++
Subjt:  DRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDSRK

A0A6J1EQI1 pentatricopeptide repeat-containing protein At1g623507.1e-12390.2Show/hide
Query:  MLRFAPNLVRRISNSATSTIPFHRFPPHTFFEHDQWETQWLLRFITCSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDL
        MLRFAPNL+RR SNSATSTI  +R    TFFEH + + Q LLRFIT SASSPSLSIWRRKKEMGKEGLIVVKELKR+QSNLIRLDRFISSHVSRLLKSDL
Subjt:  MLRFAPNLVRRISNSATSTIPFHRFPPHTFFEHDQWETQWLLRFITCSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNQVSLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQSPDR
        VAVLVELQRQNQV LCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVW+DLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIY EMRQSPDR
Subjt:  VAVLVELQRQNQVSLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQSPDR

Query:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDSRKSAR
        PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDE   KS +
Subjt:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDSRKSAR

A0A6J1HQL7 pentatricopeptide repeat-containing protein At1g623501.7e-12491.37Show/hide
Query:  MLRFAPNLVRRISNSATSTIPFHRFPPHTFFEHDQWETQWLLRFITCSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDL
        MLRFAPNL+RRISNSATSTI  +RF   TFFEH + + Q LLRFIT SASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDL
Subjt:  MLRFAPNLVRRISNSATSTIPFHRFPPHTFFEHDQWETQWLLRFITCSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDL

Query:  VAVLVELQRQNQVSLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQSPDR
        VAVLVELQRQNQV LCMKLYNVVRKEVWYRPDMFFYRDML MLAKNKRVEETKQVW+DLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIY EMRQSPDR
Subjt:  VAVLVELQRQNQVSLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQSPDR

Query:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDSRKSAR
        PLSLPFRVILKGLVPYPELREQV+DDFLELFPDMIVYDPPEDLFEEDED  KS R
Subjt:  PLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEEDEDSRKSAR

SwissProt top hitse value%identityAlignment
Q1PFH7 Pentatricopeptide repeat-containing protein At1g623507.6e-8278.42Show/hide
Query:  MGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVSLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGE
        M KEGLI  KELKRLQ+  +RLDRFI SHVSRLLKSDLV+VL E QRQNQV LCMKLY VVR+E+WYRPDMFFYRDMLMMLA+NK+V+ETK+VW+DLK E
Subjt:  MGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVSLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGE

Query:  GVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEE-DEDSR
         VLFDQHTFGD++R +LDN +P EAM +Y EMR+SPDRPLSLPFRVILKGLVPYPELRE+VKDDFLELFP MIVYDPPED+ E+ DE++R
Subjt:  GVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEE-DEDSR

Q9FKC3 Pentatricopeptide repeat-containing protein At5g48730, chloroplastic3.7e-0422.22Show/hide
Query:  MKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQS
        ++++ ++R+++WY+P++  Y  +++ML K K+ E+  +++Q++  EG + +   +  ++ AY  +     A  +   M+ S
Subjt:  MKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQS

Q9LVW6 Protein THYLAKOID ASSEMBLY 8, chloroplastic1.5e-0527.21Show/hide
Query:  MGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVSLCMKLYNVVRKEVWYRP-DMFFYRDMLMMLAKNKRVEETKQVWQDLKG
        +  E +  ++ LKR     + L   +   + RL+KSDL++VL EL RQ+  +L + + + +R E  Y P D+  Y D++  L +NK  +E  ++  ++ G
Subjt:  MGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVSLCMKLYNVVRKEVWYRP-DMFFYRDMLMMLAKNKRVEETKQVWQDLKG

Query:  EGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQS
             D      ++RA +        + +Y  MR+S
Subjt:  EGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQS

Q9STF9 Protein THYLAKOID ASSEMBLY 8-like, chloroplastic3.1e-5143.53Show/hide
Query:  SNSATSTIPFHRFPPHTFFEHDQWETQWLLRFITCSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQ
        SN    T+  H  PP  F       T ++ RF       P   +WR KK +GKE L V+  LKRL+ +  +LD+FI +HV RLLK D++AV+ EL+RQ +
Subjt:  SNSATSTIPFHRFPPHTFFEHDQWETQWLLRFITCSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQ

Query:  VSLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQSPDRPLSLPFRVILKG
         +L +K++ V++K+ WY+PD+F Y+D+++ LAK+KR++E   +W+ +K E +  D  T+ +++R +L +  P++AM++Y +M +SPD P  LPFRV+LKG
Subjt:  VSLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQSPDRPLSLPFRVILKG

Query:  LVPYPELREQVKDDFLELFPDMIVYDPPEDLF
        L+P+P LR +VK DF ELFP+   YDPPE++F
Subjt:  LVPYPELREQVKDDFLELFPDMIVYDPPEDLF

Q9ZVX5 Pentatricopeptide repeat-containing protein At2g168808.3e-0425Show/hide
Query:  PDMFFYRDMLMMLAKNKRVEETKQVWQDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQSPDRPLSLPFRVILKGLVPYPELRE--QVKDDF-
        PD   Y  +L  ++K  R+ + K++  D+K  G++ ++ T+ +++  Y       EA  I   M+Q+   P    + +++ GL     +RE  ++ D   
Subjt:  PDMFFYRDMLMMLAKNKRVEETKQVWQDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQSPDRPLSLPFRVILKGLVPYPELRE--QVKDDF-

Query:  -LELFPDMIVYD
         L+L PD++ Y+
Subjt:  -LELFPDMIVYD

Arabidopsis top hitse value%identityAlignment
AT1G62350.1 Pentatricopeptide repeat (PPR) superfamily protein5.4e-8378.42Show/hide
Query:  MGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVSLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGE
        M KEGLI  KELKRLQ+  +RLDRFI SHVSRLLKSDLV+VL E QRQNQV LCMKLY VVR+E+WYRPDMFFYRDMLMMLA+NK+V+ETK+VW+DLK E
Subjt:  MGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVSLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGE

Query:  GVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEE-DEDSR
         VLFDQHTFGD++R +LDN +P EAM +Y EMR+SPDRPLSLPFRVILKGLVPYPELRE+VKDDFLELFP MIVYDPPED+ E+ DE++R
Subjt:  GVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQSPDRPLSLPFRVILKGLVPYPELREQVKDDFLELFPDMIVYDPPEDLFEE-DEDSR

AT3G27750.1 FUNCTIONS IN: molecular_function unknown1.1e-0627.21Show/hide
Query:  MGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVSLCMKLYNVVRKEVWYRP-DMFFYRDMLMMLAKNKRVEETKQVWQDLKG
        +  E +  ++ LKR     + L   +   + RL+KSDL++VL EL RQ+  +L + + + +R E  Y P D+  Y D++  L +NK  +E  ++  ++ G
Subjt:  MGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQVSLCMKLYNVVRKEVWYRP-DMFFYRDMLMMLAKNKRVEETKQVWQDLKG

Query:  EGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQS
             D      ++RA +        + +Y  MR+S
Subjt:  EGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQS

AT3G42570.1 peroxidase family protein3.7e-0776.47Show/hide
Query:  KKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVS
        KKE  KEGLI  KELKRLQ+NL+RLDRFI SH S
Subjt:  KKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVS

AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein2.2e-5243.53Show/hide
Query:  SNSATSTIPFHRFPPHTFFEHDQWETQWLLRFITCSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQ
        SN    T+  H  PP  F       T ++ RF       P   +WR KK +GKE L V+  LKRL+ +  +LD+FI +HV RLLK D++AV+ EL+RQ +
Subjt:  SNSATSTIPFHRFPPHTFFEHDQWETQWLLRFITCSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQNQ

Query:  VSLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQSPDRPLSLPFRVILKG
         +L +K++ V++K+ WY+PD+F Y+D+++ LAK+KR++E   +W+ +K E +  D  T+ +++R +L +  P++AM++Y +M +SPD P  LPFRV+LKG
Subjt:  VSLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQSPDRPLSLPFRVILKG

Query:  LVPYPELREQVKDDFLELFPDMIVYDPPEDLF
        L+P+P LR +VK DF ELFP+   YDPPE++F
Subjt:  LVPYPELREQVKDDFLELFPDMIVYDPPEDLF

AT5G09320.1 Vacuolar sorting protein 9 (VPS9) domain3.6e-1834.91Show/hide
Query:  LDRFISSHVSRLLKSDLVAVLVELQRQNQVSLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGE-GVLFDQHTFGDIMRAYLDNA
        LDR I S   RLLK D+VAVL EL RQN+ SL +K++  +RKE WY+P +  Y DM+ ++A N  +EE   ++  +K E G++ +   F  ++   L++ 
Subjt:  LDRFISSHVSRLLKSDLVAVLVELQRQNQVSLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGE-GVLFDQHTFGDIMRAYLDNA

Query:  MPSEAMDIYNEMRQSPDRPLSLPFRVILKGLVPYPE--LREQVKDDFLELFPDMIVYDPPEDLFEEDED
        +    MD Y  M+     P    FRV++ GL    E  L   V+ D  E + + +      +  EEDE+
Subjt:  MPSEAMDIYNEMRQSPDRPLSLPFRVILKGLVPYPE--LREQVKDDFLELFPDMIVYDPPEDLFEEDED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGCGATTTGCTCCAAATCTTGTTCGCAGAATCTCAAACAGCGCCACTTCCACAATCCCTTTCCATCGATTTCCCCCTCACACATTCTTCGAACACGATCAATGGGA
GACCCAGTGGCTGTTGCGCTTCATCACTTGCTCCGCTTCGAGCCCTAGCCTGTCAATATGGAGGAGGAAGAAGGAGATGGGCAAAGAGGGCCTGATTGTGGTCAAAGAGC
TCAAGAGGCTTCAGTCCAATCTCATTCGCCTCGACCGCTTCATTTCCTCCCATGTCTCTCGCTTGCTCAAGTCCGATCTCGTCGCCGTCCTCGTCGAGCTCCAAAGGCAG
AACCAGGTCTCTCTGTGCATGAAGTTGTATAACGTGGTTCGTAAAGAAGTATGGTACCGCCCCGACATGTTCTTTTACAGAGACATGCTTATGATGCTTGCAAAAAACAA
AAGGGTGGAAGAAACAAAACAAGTTTGGCAGGATCTGAAAGGAGAGGGAGTACTATTCGATCAGCATACTTTCGGAGACATTATGAGAGCGTACTTGGATAATGCAATGC
CATCAGAGGCCATGGACATTTATAATGAAATGAGGCAATCTCCTGATAGGCCATTATCTTTACCTTTTCGTGTCATTTTGAAGGGGCTTGTTCCATACCCGGAATTGAGA
GAACAAGTTAAAGATGACTTCTTGGAGCTCTTCCCTGATATGATCGTCTATGATCCACCTGAAGATTTGTTTGAAGAAGATGAAGATAGTAGGAAGAGTGCAAGATGA
mRNA sequenceShow/hide mRNA sequence
TCTGCCTTGAACATTCTCGTCTTTCATTTTCTTCTTCTTCTTCTTCTTCAATCGTTCTCTGCTCCGAAGGCACCAGTGCCCCATGTTGTACTAAAAAAAACCCAAAAAGC
TTCAAACATCACTTGCTCTGCTCAATAATTTCAAAAACTCTGTTGGTGAATCAATTCAATCTTCCTCCAGAAGTTTGATGTTGCGATTTGCTCCAAATCTTGTTCGCAGA
ATCTCAAACAGCGCCACTTCCACAATCCCTTTCCATCGATTTCCCCCTCACACATTCTTCGAACACGATCAATGGGAGACCCAGTGGCTGTTGCGCTTCATCACTTGCTC
CGCTTCGAGCCCTAGCCTGTCAATATGGAGGAGGAAGAAGGAGATGGGCAAAGAGGGCCTGATTGTGGTCAAAGAGCTCAAGAGGCTTCAGTCCAATCTCATTCGCCTCG
ACCGCTTCATTTCCTCCCATGTCTCTCGCTTGCTCAAGTCCGATCTCGTCGCCGTCCTCGTCGAGCTCCAAAGGCAGAACCAGGTCTCTCTGTGCATGAAGTTGTATAAC
GTGGTTCGTAAAGAAGTATGGTACCGCCCCGACATGTTCTTTTACAGAGACATGCTTATGATGCTTGCAAAAAACAAAAGGGTGGAAGAAACAAAACAAGTTTGGCAGGA
TCTGAAAGGAGAGGGAGTACTATTCGATCAGCATACTTTCGGAGACATTATGAGAGCGTACTTGGATAATGCAATGCCATCAGAGGCCATGGACATTTATAATGAAATGA
GGCAATCTCCTGATAGGCCATTATCTTTACCTTTTCGTGTCATTTTGAAGGGGCTTGTTCCATACCCGGAATTGAGAGAACAAGTTAAAGATGACTTCTTGGAGCTCTTC
CCTGATATGATCGTCTATGATCCACCTGAAGATTTGTTTGAAGAAGATGAAGATAGTAGGAAGAGTGCAAGATGATCAAGTATGCGGCTCTTAAAAGTCCTTTTTTTATA
CATTTTATTAGTTCTCTCATCTCTGAACTTTTGATAGTGTTTATTAGGTCTCTAGTTGATCTAGGAGCTTTAAAAGTGTTTAATAAGTTTCTAAGCTTCAATTTTGTATC
TCTCAGACCCAAAATTCTCTATGTATTAGGCTTAAAGTTAAAATATTAGGGGTTCAATTAAATATTTAATTCAATTTTGTGTTTAATTAGTATGTGAACATTAAAAAGAC
TCTGAATATGT
Protein sequenceShow/hide protein sequence
MLRFAPNLVRRISNSATSTIPFHRFPPHTFFEHDQWETQWLLRFITCSASSPSLSIWRRKKEMGKEGLIVVKELKRLQSNLIRLDRFISSHVSRLLKSDLVAVLVELQRQ
NQVSLCMKLYNVVRKEVWYRPDMFFYRDMLMMLAKNKRVEETKQVWQDLKGEGVLFDQHTFGDIMRAYLDNAMPSEAMDIYNEMRQSPDRPLSLPFRVILKGLVPYPELR
EQVKDDFLELFPDMIVYDPPEDLFEEDEDSRKSAR