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Sed0006895 (gene) of Chayote v1 genome

Gene IDSed0006895
OrganismSechium edule (Chayote v1)
DescriptionProtein SOB FIVE-LIKE 5
Genome locationLG05:37928469..37929854
RNA-Seq ExpressionSed0006895
SyntenySed0006895
Gene Ontology termsGO:0009691 - cytokinin biosynthetic process (biological process)
InterPro domainsIPR044670 - SOB-five-Like (SOFL) family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645840.1 hypothetical protein Csa_017066 [Cucumis sativus]1.2e-3456.83Show/hide
Query:  MDHSHNLFVSSDGSVESGWTVYLENSSSSLFSKRIQDP-FDVRK-----DDEEEEEEVDLSMVSDASSRPPIFLE--NEDV--FQENEGAP---------
        MDH HNLFVSSDGSVESGWTVYLENSSSS FS+RI D  FD  K     DD++E+EEVDLSMVSDASS P  F E  NE++  F +N   P         
Subjt:  MDHSHNLFVSSDGSVESGWTVYLENSSSSLFSKRIQDP-FDVRK-----DDEEEEEEVDLSMVSDASSRPPIFLE--NEDV--FQENEGAP---------

Query:  -------SREIKGGDDRRRRRDRHEKTVSFLDDTASSDPNFKFDNSVDSSSCQNQFNAMRQSSLSGNQRQKNQWLNRKRSGLR
                R++KG  +RRR+    E+T SFLDDTA+SDPNF F+N+ ++SS QNQFN +R+SS SGNQR    W   KRSGLR
Subjt:  -------SREIKGGDDRRRRRDRHEKTVSFLDDTASSDPNFKFDNSVDSSSCQNQFNAMRQSSLSGNQRQKNQWLNRKRSGLR

XP_008455048.1 PREDICTED: uncharacterized protein LOC103495318 [Cucumis melo]1.6e-3458.76Show/hide
Query:  MDHSHNLFVSSDGSVESGWTVYLENSSSSLFSKRIQDPFD-VRKDDEEEEEEVDLSMVSDASSRPPIFLE---NEDVFQENEGAP---------------
        MDH  NLFVSSDGSVESGWTVYLEN SSS FS+RI D  D    DD++E++EVDLSMVSDASS P IF E   NE VF +N   P               
Subjt:  MDHSHNLFVSSDGSVESGWTVYLENSSSSLFSKRIQDPFD-VRKDDEEEEEEVDLSMVSDASSRPPIFLE---NEDVFQENEGAP---------------

Query:  SREIKGGDDRRRRRDRHEKTVSFLDDTASSDPNFKFDNSVDSSSCQNQFNAMRQSSLSGNQRQKNQWL-NRKRSGLR
         R++KGG+  RR+    ++T SFLDDTA+SDPNF  +NS ++S+ QNQFN++R+SSLSGNQRQKNQW   +KRSGLR
Subjt:  SREIKGGDDRRRRRDRHEKTVSFLDDTASSDPNFKFDNSVDSSSCQNQFNAMRQSSLSGNQRQKNQWL-NRKRSGLR

XP_011659723.1 uncharacterized protein LOC105436243 [Cucumis sativus]2.3e-3859.02Show/hide
Query:  MDHSHNLFVSSDGSVESGWTVYLENSSSSLFSKRIQDP-FDVRK-----DDEEEEEEVDLSMVSDASSRPPIFLE--NEDV--FQENEGAP---------
        MDH HNLFVSSDGSVESGWTVYLENSSSS FS+RI D  FD  K     DD++E+EEVDLSMVSDASS P  F E  NE++  F +N   P         
Subjt:  MDHSHNLFVSSDGSVESGWTVYLENSSSSLFSKRIQDP-FDVRK-----DDEEEEEEVDLSMVSDASSRPPIFLE--NEDV--FQENEGAP---------

Query:  -------SREIKGGDDRRRRRDRHEKTVSFLDDTASSDPNFKFDNSVDSSSCQNQFNAMRQSSLSGNQRQKNQWLNRKRSGLR
                R++KG  +RRR+    E+T SFLDDTA+SDPNF F+N+ ++SS QNQFN +R+SS SGNQRQKNQW   KRSGLR
Subjt:  -------SREIKGGDDRRRRRDRHEKTVSFLDDTASSDPNFKFDNSVDSSSCQNQFNAMRQSSLSGNQRQKNQWLNRKRSGLR

XP_022988989.1 uncharacterized protein LOC111486186 isoform X2 [Cucurbita maxima]5.4e-3559.41Show/hide
Query:  MDHSHNLFVSSDGSVESGWTVYLENSSSSLFSKRIQDPFDVRKDDEEEEEEVDLSMVSDASSRPPIFLENEDVFQENEGA-------------PSREIKG
        MDH HNLFVSS+GSVESGWTVYLE+SSSSLF+ RIQ+            EE+DLSM+SDASS PPIF ENE VF ENE                SR++KG
Subjt:  MDHSHNLFVSSDGSVESGWTVYLENSSSSLFSKRIQDPFDVRKDDEEEEEEVDLSMVSDASSRPPIFLENEDVFQENEGA-------------PSREIKG

Query:  GDDRRRRRDRHEKTVSFLDDTASSDPNFKFDNSVDSSSCQNQFNAMRQSSLSGNQRQKNQWLNRKRSGLR
        GD RR    R E+T SFLDDTASSDPNF F NS  S+SCQN          SGNQRQKNQ +N KRSGL+
Subjt:  GDDRRRRRDRHEKTVSFLDDTASSDPNFKFDNSVDSSSCQNQFNAMRQSSLSGNQRQKNQWLNRKRSGLR

XP_038887128.1 uncharacterized protein LOC120077318 [Benincasa hispida]3.7e-4466.86Show/hide
Query:  MDHSHNLFVSSDGSVESGWTVYLENSSSSLFSKRIQDPFDVRKDDEEEEEEVDLSMVSDASSRPPIFLENEDVFQENEG---------------APSREI
        MDH HNLFVSSDGSVESGWTVYLEN SSS FS RI D FDV K D E+EEEVDLSMVSDASS P IF ENE +F EN+                   R+I
Subjt:  MDHSHNLFVSSDGSVESGWTVYLENSSSSLFSKRIQDPFDVRKDDEEEEEEVDLSMVSDASSRPPIFLENEDVFQENEG---------------APSREI

Query:  KGGDDRRRRRDRHEKTVSFLDDTASSDPNFKFDNSVDSSSCQNQFNAMRQSSLSGNQRQKNQWLNRKRSGLR
        KGGD+RR+  DR E+T SFLDDTA+SDP+F F+NS +SS+ QNQFN MRQSSLSG QRQKNQW   KRSGLR
Subjt:  KGGDDRRRRRDRHEKTVSFLDDTASSDPNFKFDNSVDSSSCQNQFNAMRQSSLSGNQRQKNQWLNRKRSGLR

TrEMBL top hitse value%identityAlignment
A0A0A0K6B3 Uncharacterized protein1.1e-3859.02Show/hide
Query:  MDHSHNLFVSSDGSVESGWTVYLENSSSSLFSKRIQDP-FDVRK-----DDEEEEEEVDLSMVSDASSRPPIFLE--NEDV--FQENEGAP---------
        MDH HNLFVSSDGSVESGWTVYLENSSSS FS+RI D  FD  K     DD++E+EEVDLSMVSDASS P  F E  NE++  F +N   P         
Subjt:  MDHSHNLFVSSDGSVESGWTVYLENSSSSLFSKRIQDP-FDVRK-----DDEEEEEEVDLSMVSDASSRPPIFLE--NEDV--FQENEGAP---------

Query:  -------SREIKGGDDRRRRRDRHEKTVSFLDDTASSDPNFKFDNSVDSSSCQNQFNAMRQSSLSGNQRQKNQWLNRKRSGLR
                R++KG  +RRR+    E+T SFLDDTA+SDPNF F+N+ ++SS QNQFN +R+SS SGNQRQKNQW   KRSGLR
Subjt:  -------SREIKGGDDRRRRRDRHEKTVSFLDDTASSDPNFKFDNSVDSSSCQNQFNAMRQSSLSGNQRQKNQWLNRKRSGLR

A0A1S3C0Q6 uncharacterized protein LOC1034953187.6e-3558.76Show/hide
Query:  MDHSHNLFVSSDGSVESGWTVYLENSSSSLFSKRIQDPFD-VRKDDEEEEEEVDLSMVSDASSRPPIFLE---NEDVFQENEGAP---------------
        MDH  NLFVSSDGSVESGWTVYLEN SSS FS+RI D  D    DD++E++EVDLSMVSDASS P IF E   NE VF +N   P               
Subjt:  MDHSHNLFVSSDGSVESGWTVYLENSSSSLFSKRIQDPFD-VRKDDEEEEEEVDLSMVSDASSRPPIFLE---NEDVFQENEGAP---------------

Query:  SREIKGGDDRRRRRDRHEKTVSFLDDTASSDPNFKFDNSVDSSSCQNQFNAMRQSSLSGNQRQKNQWL-NRKRSGLR
         R++KGG+  RR+    ++T SFLDDTA+SDPNF  +NS ++S+ QNQFN++R+SSLSGNQRQKNQW   +KRSGLR
Subjt:  SREIKGGDDRRRRRDRHEKTVSFLDDTASSDPNFKFDNSVDSSSCQNQFNAMRQSSLSGNQRQKNQWL-NRKRSGLR

A0A6J1EMA0 uncharacterized protein LOC111434644 isoform X23.2e-3357.65Show/hide
Query:  MDHSHNLFVSSDGSVESGWTVYLENSSSSLFSKRIQDPFDVRKDDEEEEEEVDLSMVSDASSRPPIFLENEDVFQENEGA-------------PSREIKG
        MDH HNLFVSS+GSVESGWT+YLE+ SSS+F+ RIQ+            EE+DLSM+SDASS PPIF ENE VF ENE                SR++KG
Subjt:  MDHSHNLFVSSDGSVESGWTVYLENSSSSLFSKRIQDPFDVRKDDEEEEEEVDLSMVSDASSRPPIFLENEDVFQENEGA-------------PSREIKG

Query:  GDDRRRRRDRHEKTVSFLDDTASSDPNFKFDNSVDSSSCQNQFNAMRQSSLSGNQRQKNQWLNRKRSGLR
        GD RR    R E+T SFLDDTASSDPNF F NS  S+SCQN+         SGNQRQKNQ +N KRSGL+
Subjt:  GDDRRRRRDRHEKTVSFLDDTASSDPNFKFDNSVDSSSCQNQFNAMRQSSLSGNQRQKNQWLNRKRSGLR

A0A6J1JN42 uncharacterized protein LOC111486186 isoform X22.6e-3559.41Show/hide
Query:  MDHSHNLFVSSDGSVESGWTVYLENSSSSLFSKRIQDPFDVRKDDEEEEEEVDLSMVSDASSRPPIFLENEDVFQENEGA-------------PSREIKG
        MDH HNLFVSS+GSVESGWTVYLE+SSSSLF+ RIQ+            EE+DLSM+SDASS PPIF ENE VF ENE                SR++KG
Subjt:  MDHSHNLFVSSDGSVESGWTVYLENSSSSLFSKRIQDPFDVRKDDEEEEEEVDLSMVSDASSRPPIFLENEDVFQENEGA-------------PSREIKG

Query:  GDDRRRRRDRHEKTVSFLDDTASSDPNFKFDNSVDSSSCQNQFNAMRQSSLSGNQRQKNQWLNRKRSGLR
        GD RR    R E+T SFLDDTASSDPNF F NS  S+SCQN          SGNQRQKNQ +N KRSGL+
Subjt:  GDDRRRRRDRHEKTVSFLDDTASSDPNFKFDNSVDSSSCQNQFNAMRQSSLSGNQRQKNQWLNRKRSGLR

A0A6J1JNX8 uncharacterized protein LOC111486186 isoform X12.5e-3357.39Show/hide
Query:  MDHSHNLFVSSDGSVESGWTVYLENSSSSLFSKRIQDPFDVRKDDEEEEEEVDLSMVSDASSRPPIFLENEDVFQENEGA-------------PSREIKG
        MDH HNLFVSS+GSVESGWTVYLE+SSSSLF+ RIQ+            EE+DLSM+SDASS PPIF ENE VF ENE                SR++KG
Subjt:  MDHSHNLFVSSDGSVESGWTVYLENSSSSLFSKRIQDPFDVRKDDEEEEEEVDLSMVSDASSRPPIFLENEDVFQENEGA-------------PSREIKG

Query:  GDDRRRRRDRHEKTVSFLDDTASSDPNFKFDNSVDSSSCQNQFNAMRQSSLSGNQRQKNQ------WLNRKRSGLR
        GD RR    R E+T SFLDDTASSDPNF F NS  S+SCQN          SGNQRQKNQ       +N KRSGL+
Subjt:  GDDRRRRRDRHEKTVSFLDDTASSDPNFKFDNSVDSSSCQNQFNAMRQSSLSGNQRQKNQ------WLNRKRSGLR

SwissProt top hitse value%identityAlignment
Q8L9K4 Protein SOB FIVE-LIKE 51.0e-0739.53Show/hide
Query:  VSSDGSVESGWTVYLENSSSSLFSKRIQDP--FDVRK-----------DDEEEEEEVDLSMVSDASSRPPIFLENEDVFQENEGAPSREIKGGDDRRRRR
        + S    ESGWT+YL+ S SS      +D   FD R+             EEEEEE DLSM+SDASS P    E + V + N     ++ K    R ++R
Subjt:  VSSDGSVESGWTVYLENSSSSLFSKRIQDP--FDVRK-----------DDEEEEEEVDLSMVSDASSRPPIFLENEDVFQENEGAPSREIKGGDDRRRRR

Query:  DRHEKTVSFLDDTASSDPNFKFDNSVDSS
          +EK  S LDDTASS P F F + +  S
Subjt:  DRHEKTVSFLDDTASSDPNFKFDNSVDSS

Arabidopsis top hitse value%identityAlignment
AT1G58460.1 unknown protein8.1e-0534.91Show/hide
Query:  ESGWTVYLENSSSSLFSKRIQDPFDVRKDDEEEEEEVDLSMVSDASSRPPIFLE---NEDVFQENEGAPSREIKGGDDRRRRRDRHEKTV-----SFLDD
        +SGWT+YL +SSS          FD    + ++E + D SMVSDASS PP + E   +ED  Q+N     +      ++ +++   E+       S  DD
Subjt:  ESGWTVYLENSSSSLFSKRIQDPFDVRKDDEEEEEEVDLSMVSDASSRPPIFLE---NEDVFQENEGAPSREIKGGDDRRRRRDRHEKTV-----SFLDD

Query:  TASSDP
        TASS P
Subjt:  TASSDP

AT4G33800.1 unknown protein7.1e-0939.53Show/hide
Query:  VSSDGSVESGWTVYLENSSSSLFSKRIQDP--FDVRK-----------DDEEEEEEVDLSMVSDASSRPPIFLENEDVFQENEGAPSREIKGGDDRRRRR
        + S    ESGWT+YL+ S SS      +D   FD R+             EEEEEE DLSM+SDASS P    E + V + N     ++ K    R ++R
Subjt:  VSSDGSVESGWTVYLENSSSSLFSKRIQDP--FDVRK-----------DDEEEEEEVDLSMVSDASSRPPIFLENEDVFQENEGAPSREIKGGDDRRRRR

Query:  DRHEKTVSFLDDTASSDPNFKFDNSVDSS
          +EK  S LDDTASS P F F + +  S
Subjt:  DRHEKTVSFLDDTASSDPNFKFDNSVDSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCATAGTCATAATTTGTTTGTTTCTTCAGATGGGTCTGTGGAATCTGGTTGGACTGTTTATTTGGAGAATTCTTCTTCTTCGTTGTTTAGTAAGAGAATTCAGGA
TCCTTTCGATGTGCGAAAAGACGACGAAGAAGAAGAAGAGGAAGTTGATTTGTCTATGGTTTCTGATGCTTCTTCCAGGCCTCCAATTTTCCTGGAAAATGAAGATGTTT
TCCAAGAAAATGAAGGTGCTCCAAGCCGGGAAATAAAGGGCGGCGACGACCGACGACGGCGTCGTGATCGGCATGAGAAAACGGTGTCGTTTCTTGATGACACTGCAAGC
TCTGATCCCAACTTCAAGTTCGATAATTCGGTAGATTCATCCAGCTGCCAAAACCAATTCAATGCCATGAGACAATCCTCTCTATCTGGAAATCAAAGACAGAAGAATCA
GTGGCTTAATCGAAAGAGGTCAGGATTGAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATCATAGTCATAATTTGTTTGTTTCTTCAGATGGGTCTGTGGAATCTGGTTGGACTGTTTATTTGGAGAATTCTTCTTCTTCGTTGTTTAGTAAGAGAATTCAGGA
TCCTTTCGATGTGCGAAAAGACGACGAAGAAGAAGAAGAGGAAGTTGATTTGTCTATGGTTTCTGATGCTTCTTCCAGGCCTCCAATTTTCCTGGAAAATGAAGATGTTT
TCCAAGAAAATGAAGGTGCTCCAAGCCGGGAAATAAAGGGCGGCGACGACCGACGACGGCGTCGTGATCGGCATGAGAAAACGGTGTCGTTTCTTGATGACACTGCAAGC
TCTGATCCCAACTTCAAGTTCGATAATTCGGTAGATTCATCCAGCTGCCAAAACCAATTCAATGCCATGAGACAATCCTCTCTATCTGGAAATCAAAGACAGAAGAATCA
GTGGCTTAATCGAAAGAGGTCAGGATTGAGGTAG
Protein sequenceShow/hide protein sequence
MDHSHNLFVSSDGSVESGWTVYLENSSSSLFSKRIQDPFDVRKDDEEEEEEVDLSMVSDASSRPPIFLENEDVFQENEGAPSREIKGGDDRRRRRDRHEKTVSFLDDTAS
SDPNFKFDNSVDSSSCQNQFNAMRQSSLSGNQRQKNQWLNRKRSGLR