; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0006898 (gene) of Chayote v1 genome

Gene IDSed0006898
OrganismSechium edule (Chayote v1)
DescriptionProtein of unknown function (DUF1218)
Genome locationLG01:15569861..15572657
RNA-Seq ExpressionSed0006898
SyntenySed0006898
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009606 - Modifying wall lignin-1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573252.1 hypothetical protein SDJN03_27139, partial [Cucurbita argyrosperma subsp. sororia]4.2e-8490.56Show/hide
Query:  MGMLVLVVVFVFDLVAFALAVAAEQRRTTATVVQSGNSRFCAYDSDIATGLGVGSILILFASQVIIMVASRCLCCGKALRPSGSRAWAITLFITCWICFL
        MGMLV+VVVFV DLVAFALAVAAEQRRTTATVVQSGNS+FCAYDSDIATGLGVGS+L+LFASQVI+MVASRCLCCGKALRPSGSRAWAITLFITCW+CF+
Subjt:  MGMLVLVVVFVFDLVAFALAVAAEQRRTTATVVQSGNSRFCAYDSDIATGLGVGSILILFASQVIIMVASRCLCCGKALRPSGSRAWAITLFITCWICFL

Query:  IAAICLLAGSVRNAYHTKYVSTLMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHDQASSFAKDTGIRMASL
        IA ICLLA SVRNAYHTKYVS++MNE+ISCKMLRRGVFGAGAAFIVFTCVASELFY+SFSKAH+Q SSFAKDTGIRMAS+
Subjt:  IAAICLLAGSVRNAYHTKYVSTLMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHDQASSFAKDTGIRMASL

XP_022139805.1 uncharacterized protein LOC111010632 [Momordica charantia]1.0e-8290Show/hide
Query:  MGMLVLVVVFVFDLVAFALAVAAEQRRTTATVVQSGNSRFCAYDSDIATGLGVGSILILFASQVIIMVASRCLCCGKALRPSGSRAWAITLFITCWICFL
        M MLVLVVVFVFDLVAFALAVAAEQRRTTA VVQSGN+RFCAYDSDIATGLGVGS+L LFASQVIIMVASRCLCCGK+LRPSGSRAWA+TLFITCW+CFL
Subjt:  MGMLVLVVVFVFDLVAFALAVAAEQRRTTATVVQSGNSRFCAYDSDIATGLGVGSILILFASQVIIMVASRCLCCGKALRPSGSRAWAITLFITCWICFL

Query:  IAAICLLAGSVRNAYHTKYVSTLMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHDQASSFAKDTGIRMASL
        IA  CLLA SVRNAYHTKY+S+++NEQISCKMLR+GVFGAGAAFIVFTCVASELFYVSFSKAHDQ SSFAKDTGIRMA+L
Subjt:  IAAICLLAGSVRNAYHTKYVSTLMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHDQASSFAKDTGIRMASL

XP_022954617.1 uncharacterized protein LOC111456828 [Cucurbita moschata]2.5e-8491.11Show/hide
Query:  MGMLVLVVVFVFDLVAFALAVAAEQRRTTATVVQSGNSRFCAYDSDIATGLGVGSILILFASQVIIMVASRCLCCGKALRPSGSRAWAITLFITCWICFL
        MGMLV+VVVFV DLVAFALAVAAEQRRTTATVVQSGNS+FCAYDSDIATGLGVGS+L+LFASQVI+MVASRCLCCGKALRPSGSRAWAITLFITCW+CFL
Subjt:  MGMLVLVVVFVFDLVAFALAVAAEQRRTTATVVQSGNSRFCAYDSDIATGLGVGSILILFASQVIIMVASRCLCCGKALRPSGSRAWAITLFITCWICFL

Query:  IAAICLLAGSVRNAYHTKYVSTLMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHDQASSFAKDTGIRMASL
        IA ICLLA SVRNAYHTKYVS++MNE+ISCKMLRRGVFGAGAAFIVFTCVASELFY+SFSKAH+Q SSFAKDTGIRMAS+
Subjt:  IAAICLLAGSVRNAYHTKYVSTLMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHDQASSFAKDTGIRMASL

XP_023542784.1 uncharacterized protein LOC111802591 [Cucurbita pepo subsp. pepo]5.5e-8490.56Show/hide
Query:  MGMLVLVVVFVFDLVAFALAVAAEQRRTTATVVQSGNSRFCAYDSDIATGLGVGSILILFASQVIIMVASRCLCCGKALRPSGSRAWAITLFITCWICFL
        MGMLV+VVVFV DLVAFALAVAAEQRRTTATVVQSGNS+FCAYDSDIATGLGVGS+L+LFA+QVI+MVASRCLCCGKALRPSGSRAWAITLFITCW+CFL
Subjt:  MGMLVLVVVFVFDLVAFALAVAAEQRRTTATVVQSGNSRFCAYDSDIATGLGVGSILILFASQVIIMVASRCLCCGKALRPSGSRAWAITLFITCWICFL

Query:  IAAICLLAGSVRNAYHTKYVSTLMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHDQASSFAKDTGIRMASL
        IA ICLLA SVRNAYHTKYVS++MNE+ISCKMLRRGVFGAGAAFIVFTCVASELFY+SFSKAH+Q SSFAKDTGIRMAS+
Subjt:  IAAICLLAGSVRNAYHTKYVSTLMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHDQASSFAKDTGIRMASL

XP_038905949.1 uncharacterized protein LOC120091872 [Benincasa hispida]8.0e-8390.56Show/hide
Query:  MGMLVLVVVFVFDLVAFALAVAAEQRRTTATVVQSGNSRFCAYDSDIATGLGVGSILILFASQVIIMVASRCLCCGKALRPSGSRAWAITLFITCWICFL
        MGMLVL+VVF+FDLVAFALAVAAEQRRTTATVVQSG S+FCAYDSD+ATGLGVGS+LILFASQVI+MVASRCLCCG+ LRP GSRAWAITLFITCWICF 
Subjt:  MGMLVLVVVFVFDLVAFALAVAAEQRRTTATVVQSGNSRFCAYDSDIATGLGVGSILILFASQVIIMVASRCLCCGKALRPSGSRAWAITLFITCWICFL

Query:  IAAICLLAGSVRNAYHTKYVSTLMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHDQASSFAKDTGIRMASL
        IA ICLLA SVRNAYHTKYVS+LMNEQISCKMLRRGVFGAGAAFIVFTC ASELFYVSFSKAH Q SSFAKDTGIRMASL
Subjt:  IAAICLLAGSVRNAYHTKYVSTLMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHDQASSFAKDTGIRMASL

TrEMBL top hitse value%identityAlignment
A0A1S3B5C0 uncharacterized protein LOC1034861885.1e-8390.56Show/hide
Query:  MGMLVLVVVFVFDLVAFALAVAAEQRRTTATVVQSGNSRFCAYDSDIATGLGVGSILILFASQVIIMVASRCLCCGKALRPSGSRAWAITLFITCWICFL
        MGMLVL+VVF+FDLVAFALAVAAEQRRTTATV QSGNSRFCAYDSDIATGLGVGS LILFASQVI+MVASRCLCCG+ LRP GSRAWAITLFITCWICF 
Subjt:  MGMLVLVVVFVFDLVAFALAVAAEQRRTTATVVQSGNSRFCAYDSDIATGLGVGSILILFASQVIIMVASRCLCCGKALRPSGSRAWAITLFITCWICFL

Query:  IAAICLLAGSVRNAYHTKYVSTLMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHDQASSFAKDTGIRMASL
        IA ICLLA SVRNAYHTKYVS++MNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAH + +SFAKDTGIRMASL
Subjt:  IAAICLLAGSVRNAYHTKYVSTLMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHDQASSFAKDTGIRMASL

A0A5A7UTY8 DnaJ subfamily C member 225.1e-8390.56Show/hide
Query:  MGMLVLVVVFVFDLVAFALAVAAEQRRTTATVVQSGNSRFCAYDSDIATGLGVGSILILFASQVIIMVASRCLCCGKALRPSGSRAWAITLFITCWICFL
        MGMLVL+VVF+FDLVAFALAVAAEQRRTTATV QSGNSRFCAYDSDIATGLGVGS LILFASQVI+MVASRCLCCG+ LRP GSRAWAITLFITCWICF 
Subjt:  MGMLVLVVVFVFDLVAFALAVAAEQRRTTATVVQSGNSRFCAYDSDIATGLGVGSILILFASQVIIMVASRCLCCGKALRPSGSRAWAITLFITCWICFL

Query:  IAAICLLAGSVRNAYHTKYVSTLMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHDQASSFAKDTGIRMASL
        IA ICLLA SVRNAYHTKYVS++MNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAH + +SFAKDTGIRMASL
Subjt:  IAAICLLAGSVRNAYHTKYVSTLMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHDQASSFAKDTGIRMASL

A0A6J1CEZ1 uncharacterized protein LOC1110106325.1e-8390Show/hide
Query:  MGMLVLVVVFVFDLVAFALAVAAEQRRTTATVVQSGNSRFCAYDSDIATGLGVGSILILFASQVIIMVASRCLCCGKALRPSGSRAWAITLFITCWICFL
        M MLVLVVVFVFDLVAFALAVAAEQRRTTA VVQSGN+RFCAYDSDIATGLGVGS+L LFASQVIIMVASRCLCCGK+LRPSGSRAWA+TLFITCW+CFL
Subjt:  MGMLVLVVVFVFDLVAFALAVAAEQRRTTATVVQSGNSRFCAYDSDIATGLGVGSILILFASQVIIMVASRCLCCGKALRPSGSRAWAITLFITCWICFL

Query:  IAAICLLAGSVRNAYHTKYVSTLMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHDQASSFAKDTGIRMASL
        IA  CLLA SVRNAYHTKY+S+++NEQISCKMLR+GVFGAGAAFIVFTCVASELFYVSFSKAHDQ SSFAKDTGIRMA+L
Subjt:  IAAICLLAGSVRNAYHTKYVSTLMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHDQASSFAKDTGIRMASL

A0A6J1GRF5 uncharacterized protein LOC1114568281.2e-8491.11Show/hide
Query:  MGMLVLVVVFVFDLVAFALAVAAEQRRTTATVVQSGNSRFCAYDSDIATGLGVGSILILFASQVIIMVASRCLCCGKALRPSGSRAWAITLFITCWICFL
        MGMLV+VVVFV DLVAFALAVAAEQRRTTATVVQSGNS+FCAYDSDIATGLGVGS+L+LFASQVI+MVASRCLCCGKALRPSGSRAWAITLFITCW+CFL
Subjt:  MGMLVLVVVFVFDLVAFALAVAAEQRRTTATVVQSGNSRFCAYDSDIATGLGVGSILILFASQVIIMVASRCLCCGKALRPSGSRAWAITLFITCWICFL

Query:  IAAICLLAGSVRNAYHTKYVSTLMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHDQASSFAKDTGIRMASL
        IA ICLLA SVRNAYHTKYVS++MNE+ISCKMLRRGVFGAGAAFIVFTCVASELFY+SFSKAH+Q SSFAKDTGIRMAS+
Subjt:  IAAICLLAGSVRNAYHTKYVSTLMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHDQASSFAKDTGIRMASL

A0A6J1K1A5 uncharacterized protein LOC1114901891.1e-8290Show/hide
Query:  MGMLVLVVVFVFDLVAFALAVAAEQRRTTATVVQSGNSRFCAYDSDIATGLGVGSILILFASQVIIMVASRCLCCGKALRPSGSRAWAITLFITCWICFL
        MGMLV+VVVFV DLVAFALAVAAEQRRTTATVV SGNS+FCAYDSDIATGLGVGS+L+LFASQVI+MVASRCLC GKALRPSGSRAWAITLFITCW+CFL
Subjt:  MGMLVLVVVFVFDLVAFALAVAAEQRRTTATVVQSGNSRFCAYDSDIATGLGVGSILILFASQVIIMVASRCLCCGKALRPSGSRAWAITLFITCWICFL

Query:  IAAICLLAGSVRNAYHTKYVSTLMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHDQASSFAKDTGIRMASL
        IA ICLLA SVRNAYHTKYVS++MNE+ISCKMLRRG+FGAGAAFIVFTCVASELFYVSFSKAH+Q SSFAKDTGIRMAS+
Subjt:  IAAICLLAGSVRNAYHTKYVSTLMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHDQASSFAKDTGIRMASL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G13380.1 Protein of unknown function (DUF1218)1.1e-3445.34Show/hide
Query:  LVLVVVFVFDLVAFALAVAAEQRRTTATVVQS--GNSRFCAYDSDIATGLGVGSILILFASQVIIMVASRCLCCGKALRPSGSRAWAITLFITCWICFLI
        LV ++V    LVAF  ++AAE+RR+    +Q    N+ FC YDSD+ATG GVG+ L L +S+ ++M  ++C+C G+ L P   RAW+I  FI+ W+ FL+
Subjt:  LVLVVVFVFDLVAFALAVAAEQRRTTATVVQS--GNSRFCAYDSDIATGLGVGSILILFASQVIIMVASRCLCCGKALRPSGSRAWAITLFITCWICFLI

Query:  AAICLLAGSVRNAYHTKYVSTLMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKA
        A  C++AG+ +NAYHTKY+S   ++  SC  LR+G+F AGA FIV T V +  +Y+ F+K+
Subjt:  AAICLLAGSVRNAYHTKYVSTLMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKA

AT1G52910.1 Protein of unknown function (DUF1218)3.7e-4656.1Show/hide
Query:  LVLVVVFVFDLVAFALAVAAEQRRTTATVVQSGNSRF--CAYDSDIATGLGVGSILILFASQVIIMVASRCLCCGKALRPSGSRAWAITLFITCWICFLI
        LV+++VF+ DL+A  LA+AAEQRR+   VV  G   F  C Y SDIAT  G G+ ++LF SQVIIMVASRC CCGKAL+P GSRA  I LF+ CW+ FLI
Subjt:  LVLVVVFVFDLVAFALAVAAEQRRTTATVVQSGNSRF--CAYDSDIATGLGVGSILILFASQVIIMVASRCLCCGKALRPSGSRAWAITLFITCWICFLI

Query:  AAICLLAGSVRNAYHTKYVSTL-MNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHD
        A +CLLAGS+RNAYHT Y     +    SC+++R+GVF AGA+F +FT + S+ +Y+S+S+A D
Subjt:  AAICLLAGSVRNAYHTKYVSTL-MNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHD

AT1G61065.1 Protein of unknown function (DUF1218)4.0e-5665.36Show/hide
Query:  MLVLVVVFVFDLVAFALAVAAEQRRTTATVV-QSGNSRFCAYDSDIATGLGVGSILILFASQVIIMVASRCLCCGKALRPSGSRAWAITLFITCWICFLI
        +L+L++VFVFDL+AF LAVAAEQRRTT  +  +S +  +C YD DIATGLGVGS L+L ASQ++IMVASRCLCCG+AL PSGSR+WAI LFIT W+ F I
Subjt:  MLVLVVVFVFDLVAFALAVAAEQRRTTATVV-QSGNSRFCAYDSDIATGLGVGSILILFASQVIIMVASRCLCCGKALRPSGSRAWAITLFITCWICFLI

Query:  AAICLLAGSVRNAYHTKYVSTLMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHDQASSFAKDTGIRMASL
        A +CLLAGSVRNAYHTKY     N   SC+ LR+GVFGAGAAFIV T + SEL+YV+ S+A D   S  +D GIRM+SL
Subjt:  AAICLLAGSVRNAYHTKYVSTLMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHDQASSFAKDTGIRMASL

AT3G15480.1 Protein of unknown function (DUF1218)6.6e-4352.44Show/hide
Query:  LVLVVVFVFDLVAFALAVAAEQRRTTATVVQSGNSR--FCAYDSDIATGLGVGSILILFASQVIIMVASRCLCCGKALRPSGSRAWAITLFITCWICFLI
        LV+++VF+ DL+A  LA+AAEQRR+   V    + +  +C Y +DIAT  G G+ ++LF SQV+IM ASRC CCGK+L P GSRA AI LF+ CW+ FLI
Subjt:  LVLVVVFVFDLVAFALAVAAEQRRTTATVVQSGNSR--FCAYDSDIATGLGVGSILILFASQVIIMVASRCLCCGKALRPSGSRAWAITLFITCWICFLI

Query:  AAICLLAGSVRNAYHTKYVST-LMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHD
        A +CLLA S+RNAYHT+Y     + +  SC+++R+GVF AGAAF +FT + S+ +YV +S+A D
Subjt:  AAICLLAGSVRNAYHTKYVST-LMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHD

AT4G27435.1 Protein of unknown function (DUF1218)6.0e-4455.09Show/hide
Query:  LVLVVVFVFDLVAFALAVAAEQRRTTATVVQSGNSR--FCAYDSDIATGLGVGSILILFASQVIIMVASRCLCCGKALRPSGSRAWAITLFITCWICFLI
        +V  +VFVF+L+AF LAVAAEQRR+TA VVQ    +  +C YDSD ATG GVG+ L   ASQ++IM+ SRC CCGK L+P GSRA A+ LFI  W+ FLI
Subjt:  LVLVVVFVFDLVAFALAVAAEQRRTTATVVQSGNSR--FCAYDSDIATGLGVGSILILFASQVIIMVASRCLCCGKALRPSGSRAWAITLFITCWICFLI

Query:  AAICLLAGSVRNAYHTKYVSTLMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHDQASS
        A ICLLAGSV NAYHTKY +  M+    C+ LR+GVF AGA+F+ F  + S+ +Y  +  A + + S
Subjt:  AAICLLAGSVRNAYHTKYVSTLMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHDQASS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATGCTTGTTTTGGTTGTGGTGTTTGTCTTTGATCTGGTTGCTTTTGCGCTTGCGGTTGCTGCTGAGCAGAGAAGAACCACTGCCACGGTTGTTCAATCAGGCAA
TTCAAGATTCTGTGCATATGATTCAGATATTGCAACTGGCTTAGGTGTGGGTTCAATTCTCATCTTATTTGCTAGCCAAGTGATCATAATGGTGGCAAGTCGATGCTTAT
GCTGTGGGAAAGCTTTACGACCGAGTGGTTCGAGGGCTTGGGCTATTACACTTTTCATTACTTGCTGGATATGTTTTCTCATAGCTGCGATCTGTCTGCTGGCTGGTTCG
GTGCGAAACGCATACCATACCAAGTACGTGAGTACCCTGATGAACGAGCAAATTTCATGCAAGATGCTGAGGAGAGGAGTGTTTGGGGCTGGGGCTGCTTTTATCGTCTT
CACGTGCGTAGCATCAGAGCTGTTCTATGTCAGCTTTTCCAAGGCTCATGACCAGGCGTCTTCATTTGCCAAAGACACTGGCATTAGAATGGCAAGCCTATAG
mRNA sequenceShow/hide mRNA sequence
CTTTCTTCTTCTCGGGCTAAAAAAACAGCCTAACGAAAACCAGAGTTTATTGCAGAGATCCGCCCCTTTGATTTTCCCATTCCTTCTTCTTATAAACCCTCTTCAAGTAT
AATCCATTTACGAGCTGTTGAATCATTGAGATATGGGTATGCTTGTTTTGGTTGTGGTGTTTGTCTTTGATCTGGTTGCTTTTGCGCTTGCGGTTGCTGCTGAGCAGAGA
AGAACCACTGCCACGGTTGTTCAATCAGGCAATTCAAGATTCTGTGCATATGATTCAGATATTGCAACTGGCTTAGGTGTGGGTTCAATTCTCATCTTATTTGCTAGCCA
AGTGATCATAATGGTGGCAAGTCGATGCTTATGCTGTGGGAAAGCTTTACGACCGAGTGGTTCGAGGGCTTGGGCTATTACACTTTTCATTACTTGCTGGATATGTTTTC
TCATAGCTGCGATCTGTCTGCTGGCTGGTTCGGTGCGAAACGCATACCATACCAAGTACGTGAGTACCCTGATGAACGAGCAAATTTCATGCAAGATGCTGAGGAGAGGA
GTGTTTGGGGCTGGGGCTGCTTTTATCGTCTTCACGTGCGTAGCATCAGAGCTGTTCTATGTCAGCTTTTCCAAGGCTCATGACCAGGCGTCTTCATTTGCCAAAGACAC
TGGCATTAGAATGGCAAGCCTATAGAAGGTGTGGAGCTCCTTTATCAGAGTTGGGTTTGTAGGATTTTGTCAAACATGTGTGACTTGTTGATGTGGAAAATGAACCGAGA
GTGACAGATTACTTGTTGAATACAGATGTACAAATATGATTTCATAGTTGAGTGAAGATTTCATGTTCTGGTTTGTGTTATACGCTCTATGTAAATGACTTTTTTTAGTA
TTTGAGCTAATTGATTTCAATCTTCGTTACC
Protein sequenceShow/hide protein sequence
MGMLVLVVVFVFDLVAFALAVAAEQRRTTATVVQSGNSRFCAYDSDIATGLGVGSILILFASQVIIMVASRCLCCGKALRPSGSRAWAITLFITCWICFLIAAICLLAGS
VRNAYHTKYVSTLMNEQISCKMLRRGVFGAGAAFIVFTCVASELFYVSFSKAHDQASSFAKDTGIRMASL