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Sed0006927 (gene) of Chayote v1 genome

Gene IDSed0006927
OrganismSechium edule (Chayote v1)
DescriptionFra a 1-associated protein
Genome locationLG02:41463340..41467160
RNA-Seq ExpressionSed0006927
SyntenySed0006927
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442953.1 PREDICTED: uncharacterized protein LOC103486704 [Cucumis melo]3.1e-7473.2Show/hide
Query:  MGWIWRDEAGESDSAA--GSPF------SSGERCSTRKVVKSQCNTEEVEPGKFIRKCQRTEQILRDCIGRPVEVIQSNQEFAEEDVTNQVVNRSFSSGS
        MGW+W D+ G+ DS+A  G+ F      SS +RCSTR VV+S C TEEVEPGKF+RKC+RTE+ILRDCIGRP EVIQSN+EF EEDVT+Q+VNRSF  GS
Subjt:  MGWIWRDEAGESDSAA--GSPF------SSGERCSTRKVVKSQCNTEEVEPGKFIRKCQRTEQILRDCIGRPVEVIQSNQEFAEEDVTNQVVNRSFSSGS

Query:  SEHQPFDFPGLRSDIEAIEHSLFGSMKGFFEAAEEIRNGFFGSFKDPYLFNRESSSYPSMSRGVPIDDHEPGLFSKLNEPDSGHVDLSGLARDV
        SEH+PFDFPGLRSDI+AIE SLFGSMKGFFEAAEEI+NGFFGS +DP LFNR+SSS  SM RG+PI+DH+P  FS   EPDSGHVDLSGLARDV
Subjt:  SEHQPFDFPGLRSDIEAIEHSLFGSMKGFFEAAEEIRNGFFGSFKDPYLFNRESSSYPSMSRGVPIDDHEPGLFSKLNEPDSGHVDLSGLARDV

XP_022151462.1 uncharacterized protein LOC111019393 [Momordica charantia]1.4e-7779.68Show/hide
Query:  MGWIWRDEAGESDSAAG-SPFSSGERCSTRKVVKSQCNTEEVEPGKFIRKCQRTEQILRDCIGRPVEVIQSNQEFAEEDVTNQVVNRSFSSGSSEHQPFD
        MGW+WRDE GESD  AG S  SSG+RCSTRKVVKSQC TEEVEPGKF+RKC+RTE+ILRDC+GRPVEVIQSN+EF EEDV +QVVNRSFSSG+S HQPF 
Subjt:  MGWIWRDEAGESDSAAG-SPFSSGERCSTRKVVKSQCNTEEVEPGKFIRKCQRTEQILRDCIGRPVEVIQSNQEFAEEDVTNQVVNRSFSSGSSEHQPFD

Query:  FPGLRSDIEAIEHSLFGSMKGFFEAAEEIRNGFFGSFKDPYLFNRESSSYPSMSRGVPIDDHEPGLFSKLNEPDSGHVDLSGLARDV
        FPGLRSDIEAIE +LFGSMKGFFEAAEEI+NGFFG  +DP+ F  ESSS PSM RG+PI+DHE  +FSK NEPDSGHVDLSGLARDV
Subjt:  FPGLRSDIEAIEHSLFGSMKGFFEAAEEIRNGFFGSFKDPYLFNRESSSYPSMSRGVPIDDHEPGLFSKLNEPDSGHVDLSGLARDV

XP_023005676.1 uncharacterized protein LOC111498606 [Cucurbita maxima]8.0e-7073.85Show/hide
Query:  MGWIWRDEAGESDSAAG--------SPFSSGERCSTRKVVKSQCNTEEVEPGKFIRKCQRTEQILRDCIGRPVEVIQSNQEFAEEDVTNQVV-NRSFSSG
        MG +WR  +GE DS AG        S +SSG+RCSTRKVVKSQC TEEVEPGKF+RKC+RTE+ILRDCIGRPVEVIQSN+EF EEDVTN+VV NRSFSSG
Subjt:  MGWIWRDEAGESDSAAG--------SPFSSGERCSTRKVVKSQCNTEEVEPGKFIRKCQRTEQILRDCIGRPVEVIQSNQEFAEEDVTNQVV-NRSFSSG

Query:  SSEHQPFDFPGLRSDIEAIEHSLFGSMKGFFEAAEEIRNGFFGSFKDPYLFNRESSSYPSMSRGVPIDDHEPGLFSKLNEPDSGHVDLSGLARDV
        SSE+QPF+FPGLRSDIEAIEHSLFGSMKGFF+AAEEIRNGFFGSF+DP +FNRE SS PSM               + NEPDSGHVDLSGLARDV
Subjt:  SSEHQPFDFPGLRSDIEAIEHSLFGSMKGFFEAAEEIRNGFFGSFKDPYLFNRESSSYPSMSRGVPIDDHEPGLFSKLNEPDSGHVDLSGLARDV

XP_023539788.1 uncharacterized protein LOC111800367 [Cucurbita pepo subsp. pepo]2.8e-7074.36Show/hide
Query:  MGWIWRDEAGESDSAAG--------SPFSSGERCSTRKVVKSQCNTEEVEPGKFIRKCQRTEQILRDCIGRPVEVIQSNQEFAEEDVTNQVV-NRSFSSG
        MG +WR  +GE DS AG        S +SSG+RCSTRKVVKSQC TEEVEPGKF+RKC+RTE+ILRDCIGRPVEVIQSN+EF EEDVTN+VV NRSFSSG
Subjt:  MGWIWRDEAGESDSAAG--------SPFSSGERCSTRKVVKSQCNTEEVEPGKFIRKCQRTEQILRDCIGRPVEVIQSNQEFAEEDVTNQVV-NRSFSSG

Query:  SSEHQPFDFPGLRSDIEAIEHSLFGSMKGFFEAAEEIRNGFFGSFKDPYLFNRESSSYPSMSRGVPIDDHEPGLFSKLNEPDSGHVDLSGLARDV
        SSE+QPF+FPGLRSDIEAIEHSLFGSMKGFF+AAEEIRNGFFGSF+DP LFNRE SS PSM               + NEPDSGHVDLSGLARDV
Subjt:  SSEHQPFDFPGLRSDIEAIEHSLFGSMKGFFEAAEEIRNGFFGSFKDPYLFNRESSSYPSMSRGVPIDDHEPGLFSKLNEPDSGHVDLSGLARDV

XP_038905970.1 fra a 1-associated protein [Benincasa hispida]4.2e-7976.8Show/hide
Query:  MGWIWRDEAGESDSAA--------GSPFSSGERCSTRKVVKSQCNTEEVEPGKFIRKCQRTEQILRDCIGRPVEVIQSNQEFAEEDVTNQVVNRSFSSGS
        MGW+WRD+ GE DS+A         +  S  +RCSTRKVVKSQC TEEVEPGKF+RKC+RTE+ILRDCIGRPVEVIQSN+EF EEDVT+Q+VNRSFS GS
Subjt:  MGWIWRDEAGESDSAA--------GSPFSSGERCSTRKVVKSQCNTEEVEPGKFIRKCQRTEQILRDCIGRPVEVIQSNQEFAEEDVTNQVVNRSFSSGS

Query:  SEHQPFDFPGLRSDIEAIEHSLFGSMKGFFEAAEEIRNGFFGSFKDPYLFNRESSSYPSMSRGVPIDDHEPGLFSKLNEPDSGHVDLSGLARDV
        SEH+PFDFPGLRSDI+AIE SLFGSMKGFFEAAEEI+NGFFGS +DP LFNRESSS PSM RG+PI+DHEP  FS   EPDSGHVDLSGLARDV
Subjt:  SEHQPFDFPGLRSDIEAIEHSLFGSMKGFFEAAEEIRNGFFGSFKDPYLFNRESSSYPSMSRGVPIDDHEPGLFSKLNEPDSGHVDLSGLARDV

TrEMBL top hitse value%identityAlignment
A0A0A0LGU7 Uncharacterized protein7.3e-6970.2Show/hide
Query:  MGWIWRDEAGESDSAAG---------SPFSSGERCSTRKVVKSQCNTEEVEPGKFIRKCQRTEQILRDCIGRPVEVIQSNQEFAEEDVTNQVVNRSFSSG
        MGW+WRD+  +SDS A          SP SS + CSTR VV+S C TEEVEPGKF+RKC+RTE+ILRDCIGRP EVI+SN+E  EEDVT+Q+VNRSFS G
Subjt:  MGWIWRDEAGESDSAAG---------SPFSSGERCSTRKVVKSQCNTEEVEPGKFIRKCQRTEQILRDCIGRPVEVIQSNQEFAEEDVTNQVVNRSFSSG

Query:  S--SEHQPFDFPGLRSDIEAIEHSLFGSMKGFFEAAEEIRNGFFGSFKDPYLFNRESSSYPSMSRGVPI-DDHEPGLFSKLNEPDSGHVDLSGLARDV
        S  SEH+P DFPGLRSDI+AIE SLFGSMKGFFEAAEEI+NGFFGS +DP LFNR+SSS  SM RG+PI +DH+P  F    EPDSGHVDLSGLARDV
Subjt:  S--SEHQPFDFPGLRSDIEAIEHSLFGSMKGFFEAAEEIRNGFFGSFKDPYLFNRESSSYPSMSRGVPI-DDHEPGLFSKLNEPDSGHVDLSGLARDV

A0A1S3B6X7 uncharacterized protein LOC1034867041.5e-7473.2Show/hide
Query:  MGWIWRDEAGESDSAA--GSPF------SSGERCSTRKVVKSQCNTEEVEPGKFIRKCQRTEQILRDCIGRPVEVIQSNQEFAEEDVTNQVVNRSFSSGS
        MGW+W D+ G+ DS+A  G+ F      SS +RCSTR VV+S C TEEVEPGKF+RKC+RTE+ILRDCIGRP EVIQSN+EF EEDVT+Q+VNRSF  GS
Subjt:  MGWIWRDEAGESDSAA--GSPF------SSGERCSTRKVVKSQCNTEEVEPGKFIRKCQRTEQILRDCIGRPVEVIQSNQEFAEEDVTNQVVNRSFSSGS

Query:  SEHQPFDFPGLRSDIEAIEHSLFGSMKGFFEAAEEIRNGFFGSFKDPYLFNRESSSYPSMSRGVPIDDHEPGLFSKLNEPDSGHVDLSGLARDV
        SEH+PFDFPGLRSDI+AIE SLFGSMKGFFEAAEEI+NGFFGS +DP LFNR+SSS  SM RG+PI+DH+P  FS   EPDSGHVDLSGLARDV
Subjt:  SEHQPFDFPGLRSDIEAIEHSLFGSMKGFFEAAEEIRNGFFGSFKDPYLFNRESSSYPSMSRGVPIDDHEPGLFSKLNEPDSGHVDLSGLARDV

A0A6J1DDK9 uncharacterized protein LOC1110193936.6e-7879.68Show/hide
Query:  MGWIWRDEAGESDSAAG-SPFSSGERCSTRKVVKSQCNTEEVEPGKFIRKCQRTEQILRDCIGRPVEVIQSNQEFAEEDVTNQVVNRSFSSGSSEHQPFD
        MGW+WRDE GESD  AG S  SSG+RCSTRKVVKSQC TEEVEPGKF+RKC+RTE+ILRDC+GRPVEVIQSN+EF EEDV +QVVNRSFSSG+S HQPF 
Subjt:  MGWIWRDEAGESDSAAG-SPFSSGERCSTRKVVKSQCNTEEVEPGKFIRKCQRTEQILRDCIGRPVEVIQSNQEFAEEDVTNQVVNRSFSSGSSEHQPFD

Query:  FPGLRSDIEAIEHSLFGSMKGFFEAAEEIRNGFFGSFKDPYLFNRESSSYPSMSRGVPIDDHEPGLFSKLNEPDSGHVDLSGLARDV
        FPGLRSDIEAIE +LFGSMKGFFEAAEEI+NGFFG  +DP+ F  ESSS PSM RG+PI+DHE  +FSK NEPDSGHVDLSGLARDV
Subjt:  FPGLRSDIEAIEHSLFGSMKGFFEAAEEIRNGFFGSFKDPYLFNRESSSYPSMSRGVPIDDHEPGLFSKLNEPDSGHVDLSGLARDV

A0A6J1FHK7 uncharacterized protein LOC1114458455.1e-7073.85Show/hide
Query:  MGWIWRDEAGESDSAAG--------SPFSSGERCSTRKVVKSQCNTEEVEPGKFIRKCQRTEQILRDCIGRPVEVIQSNQEFAEEDVTNQVV-NRSFSSG
        MG +WR  +GE DS AG        S +SSG+RCSTRKVVKSQC TEEVEPGKF+RKC+RTE+ILRDCIGRPVEVIQSN+EF EEDVTN+VV NRSFSSG
Subjt:  MGWIWRDEAGESDSAAG--------SPFSSGERCSTRKVVKSQCNTEEVEPGKFIRKCQRTEQILRDCIGRPVEVIQSNQEFAEEDVTNQVV-NRSFSSG

Query:  SSEHQPFDFPGLRSDIEAIEHSLFGSMKGFFEAAEEIRNGFFGSFKDPYLFNRESSSYPSMSRGVPIDDHEPGLFSKLNEPDSGHVDLSGLARDV
        SSE+QPF+FPGLRSDIEAIEHSLFGSMKGFF+AAEEIRNGFFGSF+DP LF+RE SS PSM               + NEPDSGHVDLSGLARDV
Subjt:  SSEHQPFDFPGLRSDIEAIEHSLFGSMKGFFEAAEEIRNGFFGSFKDPYLFNRESSSYPSMSRGVPIDDHEPGLFSKLNEPDSGHVDLSGLARDV

A0A6J1KVN4 uncharacterized protein LOC1114986063.9e-7073.85Show/hide
Query:  MGWIWRDEAGESDSAAG--------SPFSSGERCSTRKVVKSQCNTEEVEPGKFIRKCQRTEQILRDCIGRPVEVIQSNQEFAEEDVTNQVV-NRSFSSG
        MG +WR  +GE DS AG        S +SSG+RCSTRKVVKSQC TEEVEPGKF+RKC+RTE+ILRDCIGRPVEVIQSN+EF EEDVTN+VV NRSFSSG
Subjt:  MGWIWRDEAGESDSAAG--------SPFSSGERCSTRKVVKSQCNTEEVEPGKFIRKCQRTEQILRDCIGRPVEVIQSNQEFAEEDVTNQVV-NRSFSSG

Query:  SSEHQPFDFPGLRSDIEAIEHSLFGSMKGFFEAAEEIRNGFFGSFKDPYLFNRESSSYPSMSRGVPIDDHEPGLFSKLNEPDSGHVDLSGLARDV
        SSE+QPF+FPGLRSDIEAIEHSLFGSMKGFF+AAEEIRNGFFGSF+DP +FNRE SS PSM               + NEPDSGHVDLSGLARDV
Subjt:  SSEHQPFDFPGLRSDIEAIEHSLFGSMKGFFEAAEEIRNGFFGSFKDPYLFNRESSSYPSMSRGVPIDDHEPGLFSKLNEPDSGHVDLSGLARDV

SwissProt top hitse value%identityAlignment
W5X2N3 Fra a 1-associated protein3.2e-5354.92Show/hide
Query:  MGWIWRDEAGE----SDSAAG-SPFSSGERCSTRKVVKSQCNTEEVEPGKFIRKCQRTEQILRDCIGRPVEVIQSNQEFAEEDVTNQVVNRSFSSGSSEH
        MGW+W+D+  +    + SAA  SP   G+RCSTRKVV++QC TEEVEPGKFIRKC++TE++LRDC+GRP+EV+QSN+E+ E+DVT+QV+  S S GS+++
Subjt:  MGWIWRDEAGE----SDSAAG-SPFSSGERCSTRKVVKSQCNTEEVEPGKFIRKCQRTEQILRDCIGRPVEVIQSNQEFAEEDVTNQVVNRSFSSGSSEH

Query:  QPFDFPGLRSDIEAIEHSLFGSMKGFFEAAEEIRNGFFGSFKDPYLFNR-ESSSYPSMSRGVPIDD-HEPGLFSKLNEPDSGHVDLSGLARDV
          F+FPGL+ DI+ IEH+  G +  FFEAAE+++NGFF SF  P++F+   S+S PS  R +PID   +   F K     SG VDLSGLARDV
Subjt:  QPFDFPGLRSDIEAIEHSLFGSMKGFFEAAEEIRNGFFGSFKDPYLFNR-ESSSYPSMSRGVPIDD-HEPGLFSKLNEPDSGHVDLSGLARDV

Arabidopsis top hitse value%identityAlignment
AT2G35900.1 unknown protein4.1e-4046.04Show/hide
Query:  MGWIWRDEAGES-------DSAAGSPFSSGERCSTRKVVKSQCNTEEVEPGKFIRKCQRTEQILRDCIGRPVEVIQSNQEFAEEDVTNQVVNRSFSSGSS
        MGWIW D++  S       D   G   ++ E CST  VV+SQC TEEVEPGKF+RKC +TE+ILR C G+P EV+QSN E  EEDVT+Q+V RS      
Subjt:  MGWIWRDEAGES-------DSAAGSPFSSGERCSTRKVVKSQCNTEEVEPGKFIRKCQRTEQILRDCIGRPVEVIQSNQEFAEEDVTNQVVNRSFSSGSS

Query:  EHQ-PFDFPGLRSDIEAIEHSLFGSMKGFFEAAEEIRNGFFGSFKDPYLFNRESSSYPSMSR-GVPIDDHEPGLFSKLNEP-------DSGHVDLSGLAR
        E + P +FPGLR D++AIE      MK FF+AAEE+ +  F    D          +PS  R G+PI++H P +    N+         SG +DLSGLA+
Subjt:  EHQ-PFDFPGLRSDIEAIEHSLFGSMKGFFEAAEEIRNGFFGSFKDPYLFNRESSSYPSMSR-GVPIDDHEPGLFSKLNEP-------DSGHVDLSGLAR

Query:  DV
        DV
Subjt:  DV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATGGATATGGCGAGACGAGGCCGGCGAATCGGATTCGGCCGCCGGCAGCCCTTTCTCCTCCGGCGAGCGGTGCTCCACCAGAAAAGTCGTGAAGTCGCAGTGCAA
CACCGAGGAGGTCGAGCCCGGAAAGTTCATCAGGAAGTGCCAAAGAACCGAGCAGATTCTCCGAGACTGCATCGGAAGGCCTGTTGAAGTGATACAGTCCAACCAAGAAT
TTGCAGAAGAGGATGTTACAAATCAGGTGGTTAATAGGTCATTCTCGTCGGGCTCATCAGAACATCAACCATTTGATTTCCCGGGGCTCCGAAGCGATATTGAAGCGATT
GAGCACAGTCTTTTCGGTAGCATGAAGGGGTTCTTCGAAGCAGCTGAAGAGATTAGAAATGGTTTCTTTGGTTCTTTCAAAGATCCATACCTGTTTAACAGAGAGTCTTC
TTCCTACCCATCGATGAGTCGAGGAGTACCCATCGATGATCATGAGCCTGGGCTCTTCTCTAAACTGAACGAGCCCGATTCTGGTCACGTCGACCTATCTGGATTGGCCA
GGGATGTATGA
mRNA sequenceShow/hide mRNA sequence
AATAAATCAAGAAGGTTGGAAGAAAATGGGATGGATATGGCGAGACGAGGCCGGCGAATCGGATTCGGCCGCCGGCAGCCCTTTCTCCTCCGGCGAGCGGTGCTCCACCA
GAAAAGTCGTGAAGTCGCAGTGCAACACCGAGGAGGTCGAGCCCGGAAAGTTCATCAGGAAGTGCCAAAGAACCGAGCAGATTCTCCGAGACTGCATCGGAAGGCCTGTT
GAAGTGATACAGTCCAACCAAGAATTTGCAGAAGAGGATGTTACAAATCAGGTGGTTAATAGGTCATTCTCGTCGGGCTCATCAGAACATCAACCATTTGATTTCCCGGG
GCTCCGAAGCGATATTGAAGCGATTGAGCACAGTCTTTTCGGTAGCATGAAGGGGTTCTTCGAAGCAGCTGAAGAGATTAGAAATGGTTTCTTTGGTTCTTTCAAAGATC
CATACCTGTTTAACAGAGAGTCTTCTTCCTACCCATCGATGAGTCGAGGAGTACCCATCGATGATCATGAGCCTGGGCTCTTCTCTAAACTGAACGAGCCCGATTCTGGT
CACGTCGACCTATCTGGATTGGCCAGGGATGTATGAATATACCCAAAATGAACCTGTGATCGTCCCTTTTTATTGAGATGTTAGATACAACAGGGACAATATATTATCTT
TATTTATCATGGTGGCTGTACAATTGATAATCAATAGAATAAACTTTTTCAGCTGTTGAAGTTTGGGGTGTACAAACAATCCAATAATTCGAGTAATCCAACCCACCTTG
GGTTGGG
Protein sequenceShow/hide protein sequence
MGWIWRDEAGESDSAAGSPFSSGERCSTRKVVKSQCNTEEVEPGKFIRKCQRTEQILRDCIGRPVEVIQSNQEFAEEDVTNQVVNRSFSSGSSEHQPFDFPGLRSDIEAI
EHSLFGSMKGFFEAAEEIRNGFFGSFKDPYLFNRESSSYPSMSRGVPIDDHEPGLFSKLNEPDSGHVDLSGLARDV