; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0006948 (gene) of Chayote v1 genome

Gene IDSed0006948
OrganismSechium edule (Chayote v1)
DescriptionRING-type domain-containing protein
Genome locationLG04:46281068..46282898
RNA-Seq ExpressionSed0006948
SyntenySed0006948
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA3482605.1 RING-H2 finger protein ATL18-like [Gossypium australe]5.4e-2646.15Show/hide
Query:  MISLAFGRGSMCMATIVFFTCVWIPLHQLKTFIESMIGILSSRMYKLFTVESTPCEVKLPVCRLRELQRTGG----AEEEICSVCLAEFTGEDLVSQLHR
        MISL       C A ++F+TCVWIP  Q K F+ S++G        +F        V LPV R  +L+ + G    AEEE+CS+CL EF  +D VSQ+ +
Subjt:  MISLAFGRGSMCMATIVFFTCVWIPLHQLKTFIESMIGILSSRMYKLFTVESTPCEVKLPVCRLRELQRTGG----AEEEICSVCLAEFTGEDLVSQLHR

Query:  CGHIFHFECIENWLHRNHFTCPLCRSFLFS
        C H+FH  CIE W+ R HFTCPLCRS LF+
Subjt:  CGHIFHFECIENWLHRNHFTCPLCRSFLFS

KAG4209026.1 hypothetical protein ERO13_A03G169300v2 [Gossypium hirsutum]4.2e-2646.92Show/hide
Query:  MISLAFGRGSMCMATIVFFTCVWIPLHQLKTFIESMIGILSSRMYKLFTVESTPCEVKLPVCRLRELQRTGG----AEEEICSVCLAEFTGEDLVSQLHR
        MISL       C A ++F+TCVWIP  QLK F+ S++G        +F        V LPV R  +L+ + G    AEEE+CS+CL EF  +D VSQ+ +
Subjt:  MISLAFGRGSMCMATIVFFTCVWIPLHQLKTFIESMIGILSSRMYKLFTVESTPCEVKLPVCRLRELQRTGG----AEEEICSVCLAEFTGEDLVSQLHR

Query:  CGHIFHFECIENWLHRNHFTCPLCRSFLFS
        C H+FH  CIE W+ R HFTCPLCRS LF+
Subjt:  CGHIFHFECIENWLHRNHFTCPLCRSFLFS

KAG6589096.1 AP-1 complex subunit sigma-2, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2970.53Show/hide
Query:  MISLAFGRGSMCMATIVFFTCVWIPLHQLKTFIESMIGILSSRMYKLFTVESTPCEVKLPVCRLRELQRTGGAEEEICSVCLAEFTGEDLVSQLH
        MISLA GRG  C+ATIV FTCVWIPL QLKTF+ESMIGILS R Y+  T+E  PCEVKLPVCR +EL R   +EE+ICSVCLA FTGEDL   +H
Subjt:  MISLAFGRGSMCMATIVFFTCVWIPLHQLKTFIESMIGILSSRMYKLFTVESTPCEVKLPVCRLRELQRTGGAEEEICSVCLAEFTGEDLVSQLH

KAG7022803.1 AP-1 complex subunit sigma-2, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-2871.43Show/hide
Query:  MISLAFGRGSMCMATIVFFTCVWIPLHQLKTFIESMIGILSSRMYKLFTVESTPCEVKLPVCRLRELQRTGGAEEEICSVCLAEFTGEDLV
        MISLA GRG  C+ATIV FTCVWIPL QLKTF+ESMIGILS R Y+  T+E  PCEVKLPVCR  EL R   +EE+ICSVCLA +TGEDL+
Subjt:  MISLAFGRGSMCMATIVFFTCVWIPLHQLKTFIESMIGILSSRMYKLFTVESTPCEVKLPVCRLRELQRTGGAEEEICSVCLAEFTGEDLV

MBA0556883.1 hypothetical protein [Gossypium lobatum]3.2e-2646.92Show/hide
Query:  MISLAFGRGSMCMATIVFFTCVWIPLHQLKTFIESMIGILSSRMYKLFTVESTPCEVKLPVCRLRELQRTGG----AEEEICSVCLAEFTGEDLVSQLHR
        MISL       C A ++F+TCVWIP  Q K F+ S++G        +F   S    V LPV R  +L+ + G    AEEE+CS+CL EF  +D VSQ+ +
Subjt:  MISLAFGRGSMCMATIVFFTCVWIPLHQLKTFIESMIGILSSRMYKLFTVESTPCEVKLPVCRLRELQRTGG----AEEEICSVCLAEFTGEDLVSQLHR

Query:  CGHIFHFECIENWLHRNHFTCPLCRSFLFS
        C H+FH  CIE W+ R HFTCPLCRS LF+
Subjt:  CGHIFHFECIENWLHRNHFTCPLCRSFLFS

TrEMBL top hitse value%identityAlignment
A0A0A0K513 RING-type domain-containing protein2.3e-4663.46Show/hide
Query:  MRKKGHVAS--------------LVFGRMISLAFGRGSMCMATIVFFTCVWIPLHQLKTFIESMIGILSSRMYKLFTVESTPCEVKLPVCRLRELQRTGG
        MRKK HVA               + FGRMI +A  RGSM MATIVF TCVWIPL QLK  I SM  ILS R  ++ T  S PCEVKL VCR  ELQR  G
Subjt:  MRKKGHVAS--------------LVFGRMISLAFGRGSMCMATIVFFTCVWIPLHQLKTFIESMIGILSSRMYKLFTVESTPCEVKLPVCRLRELQRTGG

Query:  AEEEICSVCLAEFTGEDLVSQLHRCGHIFHFECIENWLHRNHFTCPLCRSFLFSAL
        +EEEICSVCL EFT E LVSQLHRC H+FH ECIE+WL RN FTCPLCRSF+F  L
Subjt:  AEEEICSVCLAEFTGEDLVSQLHRCGHIFHFECIENWLHRNHFTCPLCRSFLFSAL

A0A0D2SLB9 RING-type domain-containing protein3.4e-2646.15Show/hide
Query:  MISLAFGRGSMCMATIVFFTCVWIPLHQLKTFIESMIGILSSRMYKLFTVESTPCEVKLPVCRLRELQRTGG----AEEEICSVCLAEFTGEDLVSQLHR
        MISL       C A ++F+TCVWIP  Q K F+ S++G        +F        V LPV R  +L+ + G    AEEE+CS+CL EF  +D VSQ+ +
Subjt:  MISLAFGRGSMCMATIVFFTCVWIPLHQLKTFIESMIGILSSRMYKLFTVESTPCEVKLPVCRLRELQRTGG----AEEEICSVCLAEFTGEDLVSQLHR

Query:  CGHIFHFECIENWLHRNHFTCPLCRSFLFS
        C H+FH  CIE W+ R HFTCPLCRS LF+
Subjt:  CGHIFHFECIENWLHRNHFTCPLCRSFLFS

A0A5B6WNP2 RING-H2 finger protein ATL18-like2.6e-2646.15Show/hide
Query:  MISLAFGRGSMCMATIVFFTCVWIPLHQLKTFIESMIGILSSRMYKLFTVESTPCEVKLPVCRLRELQRTGG----AEEEICSVCLAEFTGEDLVSQLHR
        MISL       C A ++F+TCVWIP  Q K F+ S++G        +F        V LPV R  +L+ + G    AEEE+CS+CL EF  +D VSQ+ +
Subjt:  MISLAFGRGSMCMATIVFFTCVWIPLHQLKTFIESMIGILSSRMYKLFTVESTPCEVKLPVCRLRELQRTGG----AEEEICSVCLAEFTGEDLVSQLHR

Query:  CGHIFHFECIENWLHRNHFTCPLCRSFLFS
        C H+FH  CIE W+ R HFTCPLCRS LF+
Subjt:  CGHIFHFECIENWLHRNHFTCPLCRSFLFS

A0A5D2M180 RING-type domain-containing protein3.4e-2646.15Show/hide
Query:  MISLAFGRGSMCMATIVFFTCVWIPLHQLKTFIESMIGILSSRMYKLFTVESTPCEVKLPVCRLRELQRTGG----AEEEICSVCLAEFTGEDLVSQLHR
        MISL       C A ++F+TCVWIP  Q K F+ S++G        +F        V LPV R  +L+ + G    AEEE+CS+CL EF  +D VSQ+ +
Subjt:  MISLAFGRGSMCMATIVFFTCVWIPLHQLKTFIESMIGILSSRMYKLFTVESTPCEVKLPVCRLRELQRTGG----AEEEICSVCLAEFTGEDLVSQLHR

Query:  CGHIFHFECIENWLHRNHFTCPLCRSFLFS
        C H+FH  CIE W+ R HFTCPLCRS LF+
Subjt:  CGHIFHFECIENWLHRNHFTCPLCRSFLFS

A0A7J8LWW2 RING-type domain-containing protein1.5e-2646.92Show/hide
Query:  MISLAFGRGSMCMATIVFFTCVWIPLHQLKTFIESMIGILSSRMYKLFTVESTPCEVKLPVCRLRELQRTGG----AEEEICSVCLAEFTGEDLVSQLHR
        MISL       C A ++F+TCVWIP  Q K F+ S++G        +F   S    V LPV R  +L+ + G    AEEE+CS+CL EF  +D VSQ+ +
Subjt:  MISLAFGRGSMCMATIVFFTCVWIPLHQLKTFIESMIGILSSRMYKLFTVESTPCEVKLPVCRLRELQRTGG----AEEEICSVCLAEFTGEDLVSQLHR

Query:  CGHIFHFECIENWLHRNHFTCPLCRSFLFS
        C H+FH  CIE W+ R HFTCPLCRS LF+
Subjt:  CGHIFHFECIENWLHRNHFTCPLCRSFLFS

SwissProt top hitse value%identityAlignment
Q8GW38 RING-H2 finger protein ATL472.2e-0947.06Show/hide
Query:  LPVCRLRELQRTGGAEEEICSVCLAEFTGEDLVSQLHRCGHIFHFECIENWLHRNHFTCPLCRSFLFS
        LPV   +E++  G  E   C+VCL EF+ +D +  L  C H FH +CI+ WL  N  TCPLCR  LFS
Subjt:  LPVCRLRELQRTGGAEEEICSVCLAEFTGEDLVSQLHRCGHIFHFECIENWLHRNHFTCPLCRSFLFS

Q940Q4 RING-H2 finger protein ATL132.8e-0954.9Show/hide
Query:  CSVCLAEFTGEDLVSQLHRCGHIFHFECIENWLHRNHFTCPLCRSFLFSAL
        C+VCL EF  ED +  L +C H FH +CI+ WL  +H TCPLCRS L S L
Subjt:  CSVCLAEFTGEDLVSQLHRCGHIFHFECIENWLHRNHFTCPLCRSFLFSAL

Q9SUS5 E3 ubiquitin-protein ligase RHA1B1.6e-0940Show/hide
Query:  LPVCRLRELQRTGGAEEEICSVCLAEFTGEDLVSQLHRCGHIFHFECIENWL-HRNHFTCPLCRS
        +PV R  +L       E+ C+VCL++F  +D + QL +CGH+FH  C++ W+   N  TCP+CR+
Subjt:  LPVCRLRELQRTGGAEEEICSVCLAEFTGEDLVSQLHRCGHIFHFECIENWL-HRNHFTCPLCRS

Q9SZL4 RING-H2 finger protein ATL181.6e-1741.27Show/hide
Query:  MISLAFGRGSMCMATIVFFTCVWIPLHQLKTFIESMIGILSSRMYKLFTVESTPCEVKLPVCRLRELQRTGGAEEEICSVCLAEFTGEDLVSQLHRCGHI
        MIS+ F R  +C A IVF+TCV IPL +LK              Y L  V     E +  +C               C +CL EF  ED V+ L RC H+
Subjt:  MISLAFGRGSMCMATIVFFTCVWIPLHQLKTFIESMIGILSSRMYKLFTVESTPCEVKLPVCRLRELQRTGGAEEEICSVCLAEFTGEDLVSQLHRCGHI

Query:  FHFECIENWLHRNHFTCPLCRSFLFS
        FH  CIE WL R H TCPLCRSF+ +
Subjt:  FHFECIENWLHRNHFTCPLCRSFLFS

Q9XF92 Brassinosteroid-responsive RING protein 18.7e-1145.31Show/hide
Query:  LPVCRLRELQRTGGAEEEICSVCLAEFTGEDLVSQLHRCGHIFHFECIENWLHRNHFTCPLCRS
        LPV +  EL  +G    E C+VCL EF GE  +  L  C HIFH  C++ W+  +  TCPLCR+
Subjt:  LPVCRLRELQRTGGAEEEICSVCLAEFTGEDLVSQLHRCGHIFHFECIENWLHRNHFTCPLCRS

Arabidopsis top hitse value%identityAlignment
AT1G23980.1 RING/U-box superfamily protein1.5e-1047.06Show/hide
Query:  LPVCRLRELQRTGGAEEEICSVCLAEFTGEDLVSQLHRCGHIFHFECIENWLHRNHFTCPLCRSFLFS
        LPV   +E++  G  E   C+VCL EF+ +D +  L  C H FH +CI+ WL  N  TCPLCR  LFS
Subjt:  LPVCRLRELQRTGGAEEEICSVCLAEFTGEDLVSQLHRCGHIFHFECIENWLHRNHFTCPLCRSFLFS

AT1G24580.1 RING/U-box superfamily protein2.4e-1134.62Show/hide
Query:  LKTFIESMIGILSSRMYKLFTVESTP----CEVKLPVCRLRELQRTGGAEEE----ICSVCLAEFTGEDLVSQLHRCGHIFHFECIENWLHRNHFTCPLC
        LK  + S+  I++S       ++  P       ++ + + + L      EEE     C VCL  F  E+ VS+L  C H FH  C++NW   NH TCPLC
Subjt:  LKTFIESMIGILSSRMYKLFTVESTP----CEVKLPVCRLRELQRTGGAEEE----ICSVCLAEFTGEDLVSQLHRCGHIFHFECIENWLHRNHFTCPLC

Query:  RSFL
        RS L
Subjt:  RSFL

AT3G61460.1 brassinosteroid-responsive RING-H26.2e-1245.31Show/hide
Query:  LPVCRLRELQRTGGAEEEICSVCLAEFTGEDLVSQLHRCGHIFHFECIENWLHRNHFTCPLCRS
        LPV +  EL  +G    E C+VCL EF GE  +  L  C HIFH  C++ W+  +  TCPLCR+
Subjt:  LPVCRLRELQRTGGAEEEICSVCLAEFTGEDLVSQLHRCGHIFHFECIENWLHRNHFTCPLCRS

AT4G11360.1 RING-H2 finger A1B1.2e-1040Show/hide
Query:  LPVCRLRELQRTGGAEEEICSVCLAEFTGEDLVSQLHRCGHIFHFECIENWL-HRNHFTCPLCRS
        +PV R  +L       E+ C+VCL++F  +D + QL +CGH+FH  C++ W+   N  TCP+CR+
Subjt:  LPVCRLRELQRTGGAEEEICSVCLAEFTGEDLVSQLHRCGHIFHFECIENWL-HRNHFTCPLCRS

AT4G38140.1 RING/U-box superfamily protein1.2e-1841.27Show/hide
Query:  MISLAFGRGSMCMATIVFFTCVWIPLHQLKTFIESMIGILSSRMYKLFTVESTPCEVKLPVCRLRELQRTGGAEEEICSVCLAEFTGEDLVSQLHRCGHI
        MIS+ F R  +C A IVF+TCV IPL +LK              Y L  V     E +  +C               C +CL EF  ED V+ L RC H+
Subjt:  MISLAFGRGSMCMATIVFFTCVWIPLHQLKTFIESMIGILSSRMYKLFTVESTPCEVKLPVCRLRELQRTGGAEEEICSVCLAEFTGEDLVSQLHRCGHI

Query:  FHFECIENWLHRNHFTCPLCRSFLFS
        FH  CIE WL R H TCPLCRSF+ +
Subjt:  FHFECIENWLHRNHFTCPLCRSFLFS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAAGAAAGGCCATGTTGCAAGCTTAGTTTTTGGCAGAATGATAAGCTTGGCGTTTGGTCGAGGCTCAATGTGCATGGCCACCATTGTGTTCTTCACTTGTGTGTG
GATCCCTCTGCATCAACTGAAGACGTTCATCGAGAGCATGATCGGCATTCTCTCTAGCAGGATGTACAAACTGTTCACAGTGGAGTCGACACCCTGCGAGGTAAAACTTC
CGGTCTGTAGGCTCAGAGAGCTGCAGCGTACAGGTGGAGCAGAAGAGGAGATTTGCTCGGTTTGCTTGGCGGAGTTCACCGGAGAAGATTTGGTGAGCCAACTGCATAGG
TGTGGCCATATTTTTCATTTTGAATGTATTGAAAATTGGCTCCATAGAAATCACTTCACCTGCCCTCTCTGCAGATCCTTCCTCTTTTCAGCACTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAAAGAAAGGCCATGTTGCAAGCTTAGTTTTTGGCAGAATGATAAGCTTGGCGTTTGGTCGAGGCTCAATGTGCATGGCCACCATTGTGTTCTTCACTTGTGTGTG
GATCCCTCTGCATCAACTGAAGACGTTCATCGAGAGCATGATCGGCATTCTCTCTAGCAGGATGTACAAACTGTTCACAGTGGAGTCGACACCCTGCGAGGTAAAACTTC
CGGTCTGTAGGCTCAGAGAGCTGCAGCGTACAGGTGGAGCAGAAGAGGAGATTTGCTCGGTTTGCTTGGCGGAGTTCACCGGAGAAGATTTGGTGAGCCAACTGCATAGG
TGTGGCCATATTTTTCATTTTGAATGTATTGAAAATTGGCTCCATAGAAATCACTTCACCTGCCCTCTCTGCAGATCCTTCCTCTTTTCAGCACTGTAA
Protein sequenceShow/hide protein sequence
MRKKGHVASLVFGRMISLAFGRGSMCMATIVFFTCVWIPLHQLKTFIESMIGILSSRMYKLFTVESTPCEVKLPVCRLRELQRTGGAEEEICSVCLAEFTGEDLVSQLHR
CGHIFHFECIENWLHRNHFTCPLCRSFLFSAL