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Sed0006964 (gene) of Chayote v1 genome

Gene IDSed0006964
OrganismSechium edule (Chayote v1)
Descriptionthioredoxin-like protein CITRX, chloroplastic
Genome locationLG03:17153287..17155704
RNA-Seq ExpressionSed0006964
SyntenySed0006964
Gene Ontology termsGO:0009657 - plastid organization (biological process)
GO:0045454 - cell redox homeostasis (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0047134 - protein-disulfide reductase activity (molecular function)
InterPro domainsIPR044182 - Thioredoxin-like protein CITRX, chloroplastic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064789.1 thioredoxin-like protein CITRX [Cucumis melo var. makuwa]2.9e-1880Show/hide
Query:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM
        L  EYENN MI+KVDTDD+YEFSRDMQ   LPTLFFISP+PNKEAIRTEGL  IQMMRDIID +M
Subjt:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM
XP_004146769.1 thioredoxin-like protein CITRX, chloroplastic [Cucumis sativus]3.7e-1880Show/hide
Query:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM
        L  EYENN MI+KVDTDD+YEFSRDMQ   LPTLFFISP+PNKEAIRTEGL  IQMMRDIID +M
Subjt:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM
XP_008445409.1 PREDICTED: thioredoxin-like protein CITRX, chloroplastic [Cucumis melo]2.9e-1880Show/hide
Query:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM
        L  EYENN MI+KVDTDD+YEFSRDMQ   LPTLFFISP+PNKEAIRTEGL  IQMMRDIID +M
Subjt:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM
XP_020236288.1 thioredoxin-like protein CITRX, chloroplastic [Cajanus cajan]1.1e-1778.46Show/hide
Query:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM
        L  EYENN MIVKVDTDD+YEF+RDMQ   LPT+FFISP+PNK+AIRTEGL  IQMMRDIID DM
Subjt:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM
XP_038884365.1 thioredoxin-like protein CITRX, chloroplastic [Benincasa hispida]2.9e-1881.54Show/hide
Query:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM
        L  EYENN MIVKVDTDD+YEFSRDMQ   LPTLFFISP+PNKEAIRTEGL  IQMMRDIID +M
Subjt:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM
TrEMBL top hitse value%identityAlignment
A0A0A0KH97 Thioredoxin domain-containing protein1.8e-1880Show/hide
Query:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM
        L  EYENN MI+KVDTDD+YEFSRDMQ   LPTLFFISP+PNKEAIRTEGL  IQMMRDIID +M
Subjt:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM
A0A151RTY8 Thioredoxin5.3e-1878.46Show/hide
Query:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM
        L  EYENN MIVKVDTDD+YEF+RDMQ   LPT+FFISP+PNK+AIRTEGL  IQMMRDIID DM
Subjt:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM
A0A1S3BCN5 thioredoxin-like protein CITRX, chloroplastic1.4e-1880Show/hide
Query:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM
        L  EYENN MI+KVDTDD+YEFSRDMQ   LPTLFFISP+PNKEAIRTEGL  IQMMRDIID +M
Subjt:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM
A0A5A7VH45 Thioredoxin-like protein CITRX1.4e-1880Show/hide
Query:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM
        L  EYENN MI+KVDTDD+YEFSRDMQ   LPTLFFISP+PNKEAIRTEGL  IQMMRDIID +M
Subjt:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM
A0A6P4AIP9 thioredoxin-like protein CITRX, chloroplastic5.3e-1878.46Show/hide
Query:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM
        L  EYE+N MIVKVDTDD+YEF+RDMQ   LPTLFFISPNPNK+AIRTEGL  IQMMRDIID +M
Subjt:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM
SwissProt top hitse value%identityAlignment
M1A3D5 Thioredoxin-like protein CITRX, chloroplastic6.6e-1870.77Show/hide
Query:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM
        L  EYENN +IVKVDTDD+YEF+RDMQ   LPTL+FISP+ +K+AIRTEGL  IQMMRDII+ D+
Subjt:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM
Q6JE37 Thioredoxin-like protein CITRX2, chloroplastic7.8e-1972.31Show/hide
Query:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM
        L  EYE+N +IVKVDTDD+YEF+RDMQ   LPTL+FISP+PNK+AIRTEGL  IQMMRDII+ D+
Subjt:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM
Q6JE38 Thioredoxin-like protein CITRX1, chloroplastic3.0e-1870.77Show/hide
Query:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM
        L  EYE+N +IVKVD DD+YEF+RDMQ   LPTL+FISP+PNK+AIRTEGL  IQMMRDII+ D+
Subjt:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM
Q9LKW0 Thioredoxin-like protein CITRX, chloroplastic1.7e-1872.31Show/hide
Query:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM
        L  EYENN +IVKVDTDD+YEF+RDMQ   LPTL+FISP+ +K+AIRTEGL  IQMMRDIID D+
Subjt:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM
Q9M7X9 Thioredoxin-like protein CITRX, chloroplastic3.9e-1870.77Show/hide
Query:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM
        L  EYE+N +IVKVDTDD+YEF+RDMQ   LPTLFFISP+P+K+AIRTEGL  +QMM DIID +M
Subjt:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM
Arabidopsis top hitse value%identityAlignment
AT3G06730.1 Thioredoxin z2.8e-1970.77Show/hide
Query:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM
        L  EYE+N +IVKVDTDD+YEF+RDMQ   LPTLFFISP+P+K+AIRTEGL  +QMM DIID +M
Subjt:  LLSEYENNVMIVKVDTDDKYEFSRDMQ---LPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACCTGATGTTATCTTATCAAATATCATTTTCTCTTCAATTGTATCTTTTGTTAGTATATTTACTCCTATCCTGCTGCCTTACAGTCCATTGAGGAGGAAATTCCA
AGTCATACGATCTGTTGTTCTTCTTCTTGCTAGTGCTCAATGGGTTTGGTTTTACCATTCAATTTTGTTGGGATCAAATTGTCTCTTTGGTCCCTGCATCGACTGCCATA
GTATTCAAAATTTGCATTGCATCATGGATCTATTTATAATTGATGATTTGCAAAAAAAAATTGTTTGCCTACCCCGTTTGATAATTATTTGCTTGTTGTCTGAGTACGAG
AACAATGTAATGATCGTTAAAGTTGATACAGACGACAAATATGAATTTTCGCGCGATATGCAGTTGCCTACACTTTTCTTCATTAGCCCGAATCCAAATAAAGAAGCTAT
CCGCACAGAAGGTCTCACTCTGATTCAGATGATGCGAGATATCATCGATACAGATATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAACCTGATGTTATCTTATCAAATATCATTTTCTCTTCAATTGTATCTTTTGTTAGTATATTTACTCCTATCCTGCTGCCTTACAGTCCATTGAGGAGGAAATTCCA
AGTCATACGATCTGTTGTTCTTCTTCTTGCTAGTGCTCAATGGGTTTGGTTTTACCATTCAATTTTGTTGGGATCAAATTGTCTCTTTGGTCCCTGCATCGACTGCCATA
GTATTCAAAATTTGCATTGCATCATGGATCTATTTATAATTGATGATTTGCAAAAAAAAATTGTTTGCCTACCCCGTTTGATAATTATTTGCTTGTTGTCTGAGTACGAG
AACAATGTAATGATCGTTAAAGTTGATACAGACGACAAATATGAATTTTCGCGCGATATGCAGTTGCCTACACTTTTCTTCATTAGCCCGAATCCAAATAAAGAAGCTAT
CCGCACAGAAGGTCTCACTCTGATTCAGATGATGCGAGATATCATCGATACAGATATGTGA
Protein sequenceShow/hide protein sequence
MKPDVILSNIIFSSIVSFVSIFTPILLPYSPLRRKFQVIRSVVLLLASAQWVWFYHSILLGSNCLFGPCIDCHSIQNLHCIMDLFIIDDLQKKIVCLPRLIIICLLSEYE
NNVMIVKVDTDDKYEFSRDMQLPTLFFISPNPNKEAIRTEGLTLIQMMRDIIDTDM