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Sed0006974 (gene) of Chayote v1 genome

Gene IDSed0006974
OrganismSechium edule (Chayote v1)
DescriptionSmall ubiquitin-related modifier
Genome locationLG04:44061371..44061964
RNA-Seq ExpressionSed0006974
SyntenySed0006974
Gene Ontology termsGO:0016925 - protein sumoylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0031386 - protein tag (molecular function)
GO:0044389 - ubiquitin-like protein ligase binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR022617 - Rad60/SUMO-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061648.1 small ubiquitin-related modifier 1 [Cucumis melo var. makuwa]5.7e-2864.08Show/hide
Query:  TTINNTQEED---QRTGKPESNYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHH-GGG
        T++NN  +E+   +   KPES YVN+KVNGQDGSEV+F++ KK++L KLM  YC+RQ L+   +AFL+DGH I+GTQTA+ELGL+DGDEIDAMKHH GGG
Subjt:  TTINNTQEED---QRTGKPESNYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHH-GGG

Query:  GGA
        GGA
Subjt:  GGA

XP_022952738.1 small ubiquitin-related modifier 1-like [Cucurbita moschata]8.8e-2962.39Show/hide
Query:  TTINNTQEEDQRTGKPES-----NYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGG
        TT++  QE   R  KPE+     NYVN+KVNGQDGSEV+F++ K+TQL KLM  YC+RQ L+L+ +AFL+DGH I+G QTADELG++DGD+IDAMKHHGG
Subjt:  TTINNTQEEDQRTGKPES-----NYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGG

Query:  GGG--AKWV
        GGG   KW+
Subjt:  GGG--AKWV

XP_022969393.1 small ubiquitin-related modifier 1-like isoform X2 [Cucurbita maxima]1.0e-2963.55Show/hide
Query:  TTINNTQEEDQR--TGKPESNYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGGGGG
        TT++  QE   R    +P +NYVN+KVNGQDGSEV+F++ K+TQL KLM  YC+RQ L+L+ +AFL+DGH I+G QTADELG++DGDEIDAMKHHGGGGG
Subjt:  TTINNTQEEDQR--TGKPESNYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGGGGG

Query:  A---KWV
            KWV
Subjt:  A---KWV

XP_023553983.1 small ubiquitin-related modifier 1-like [Cucurbita pepo subsp. pepo]7.5e-2862.26Show/hide
Query:  TTINNTQEEDQR--TGKPESNYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGGGGG
        TT++  +E   R    +P S YVN+KVNGQDGSEV+F++ K+TQL +LM  YC+RQ L+L  +AFL+DGH I G QTADELG++DGDEIDAMKHHGGGGG
Subjt:  TTINNTQEEDQR--TGKPESNYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGGGGG

Query:  --AKWV
           KWV
Subjt:  --AKWV

XP_038888534.1 small ubiquitin-related modifier 1-like isoform X1 [Benincasa hispida]3.3e-2864.36Show/hide
Query:  MSGTTINNTQEEDQR--TGKPESNYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGG
        MS    N++ EE  R    KP+S YVN+KVNGQDGSEV+F++ K+TQL KLM  YC+RQGL+L+ +AFL+DGH I+GTQTA+EL ++DGDEIDAMKHHGG
Subjt:  MSGTTINNTQEEDQR--TGKPESNYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGG

Query:  G
        G
Subjt:  G

TrEMBL top hitse value%identityAlignment
A0A565CRL3 Small ubiquitin-related modifier9.2e-2455.56Show/hide
Query:  TQEEDQRTGKPESNYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGGGGGAKWVSL
        TQEED++ G+    ++N+KV GQDG+EVFF++ + TQL KLMN YC+RQ +D   +AFL DG  + G QT DEL ++DGDEIDAM H  GGGGA  ++L
Subjt:  TQEEDQRTGKPESNYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGGGGGAKWVSL

A0A5A7V249 Small ubiquitin-related modifier 12.8e-2864.08Show/hide
Query:  TTINNTQEED---QRTGKPESNYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHH-GGG
        T++NN  +E+   +   KPES YVN+KVNGQDGSEV+F++ KK++L KLM  YC+RQ L+   +AFL+DGH I+GTQTA+ELGL+DGDEIDAMKHH GGG
Subjt:  TTINNTQEED---QRTGKPESNYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHH-GGG

Query:  GGA
        GGA
Subjt:  GGA

A0A6J1D1W9 small ubiquitin-related modifier 1-like3.1e-2766.67Show/hide
Query:  EEDQRTGKPES----NYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGGGGGA
        + ++ T KPES     YVNIKVNGQDGSEV+F+V KKTQL KLM  YC+RQG D +++AFL+DGH I+G QT ++L LKDGDEIDAM HHGGGGGA
Subjt:  EEDQRTGKPES----NYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGGGGGA

A0A6J1GLF8 Small ubiquitin-related modifier4.3e-2962.39Show/hide
Query:  TTINNTQEEDQRTGKPES-----NYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGG
        TT++  QE   R  KPE+     NYVN+KVNGQDGSEV+F++ K+TQL KLM  YC+RQ L+L+ +AFL+DGH I+G QTADELG++DGD+IDAMKHHGG
Subjt:  TTINNTQEEDQRTGKPES-----NYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGG

Query:  GGG--AKWV
        GGG   KW+
Subjt:  GGG--AKWV

A0A6J1I0U8 small ubiquitin-related modifier 1-like isoform X25.0e-3063.55Show/hide
Query:  TTINNTQEEDQR--TGKPESNYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGGGGG
        TT++  QE   R    +P +NYVN+KVNGQDGSEV+F++ K+TQL KLM  YC+RQ L+L+ +AFL+DGH I+G QTADELG++DGDEIDAMKHHGGGGG
Subjt:  TTINNTQEEDQR--TGKPESNYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGGGGG

Query:  A---KWV
            KWV
Subjt:  A---KWV

SwissProt top hitse value%identityAlignment
O13351 Ubiquitin-like protein pmt3/smt36.8e-1646.15Show/hide
Query:  TQEEDQRTGKPESNYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGGG
        T +  Q+  KP + ++N+KV GQD +EVFFK+ K T+  KLM  YC RQG  +  L FL+DG  I   QT  EL ++DGD+I+A+    GG
Subjt:  TQEEDQRTGKPESNYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGGG

P55852 Small ubiquitin-related modifier 14.9e-2254.35Show/hide
Query:  QEEDQRTGKPESNYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGGGGG
        QEED++ G   + ++N+KV GQDG+EVFF++ + TQL KLMN YC+RQ +D+  +AFL DG  +   QT DEL ++DGDEIDAM H  GG G
Subjt:  QEEDQRTGKPESNYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGGGGG

P55857 Small ubiquitin-related modifier 11.4e-2153.85Show/hide
Query:  EEDQRT--GKPESNYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGGG
        EED++   G+    ++N+KV GQDG+EVFF++ + TQL KLMN YC+RQ +D+  +AFL DG  + G QT DEL ++DGDEIDAM H  GG
Subjt:  EEDQRT--GKPESNYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGGG

Q6DI05 Small ubiquitin-related modifier 32.2e-1446.67Show/hide
Query:  EEDQRTG-KPESNYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGGG
        EE  R G K E++++N+KV GQDGS V FK+ + T L KLM  YCERQGL ++ + F  DG  I+ T T  +L ++D D ID  +   GG
Subjt:  EEDQRTG-KPESNYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGGG

Q9FLP6 Small ubiquitin-related modifier 28.3e-2252Show/hide
Query:  TQEEDQRTGKPESN-YVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGGGGGAKWVSL
        T EED+   KP+   ++N+KV GQDG+EVFF++ + TQL KLMN YC+RQ +D   +AFL DG  +   QT DEL ++DGDEIDAM H  GGG    + L
Subjt:  TQEEDQRTGKPESN-YVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGGGGGAKWVSL

Arabidopsis top hitse value%identityAlignment
AT4G26840.1 small ubiquitin-like modifier 13.5e-2354.35Show/hide
Query:  QEEDQRTGKPESNYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGGGGG
        QEED++ G   + ++N+KV GQDG+EVFF++ + TQL KLMN YC+RQ +D+  +AFL DG  +   QT DEL ++DGDEIDAM H  GG G
Subjt:  QEEDQRTGKPESNYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGGGGG

AT5G55160.1 small ubiquitin-like modifier 25.9e-2352Show/hide
Query:  TQEEDQRTGKPESN-YVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGGGGGAKWVSL
        T EED+   KP+   ++N+KV GQDG+EVFF++ + TQL KLMN YC+RQ +D   +AFL DG  +   QT DEL ++DGDEIDAM H  GGG    + L
Subjt:  TQEEDQRTGKPESN-YVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGGGGGAKWVSL

AT5G55160.2 small ubiquitin-like modifier 23.6e-2046.02Show/hide
Query:  TQEEDQRTGKPESN-YVNIKVNGQ-------------DGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMK
        T EED+   KP+   ++N+KV GQ             DG+EVFF++ + TQL KLMN YC+RQ +D   +AFL DG  +   QT DEL ++DGDEIDAM 
Subjt:  TQEEDQRTGKPESN-YVNIKVNGQ-------------DGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMK

Query:  HHGGGGGAKWVSL
        H  GGG    + L
Subjt:  HHGGGGGAKWVSL

AT5G55170.1 small ubiquitin-like modifier 31.3e-1443.82Show/hide
Query:  EEDQRTGKPESNYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGGG
        ++D+   + +  +V +KV  QDG EV FK  K   L KLM  YC+R+GL L   AF+ +G  I G +T DEL ++DGD IDA +   GG
Subjt:  EEDQRTGKPESNYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGGG

AT5G55856.1 Ubiquitin-like superfamily protein1.0e-1139.24Show/hide
Query:  SNYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGGG
        S+++ +KV  QD   V+F++ +  +L K+M+ Y ++ G+++  L FL DG+ I   QT +ELGL+D DEI+A     GG
Subjt:  SNYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGGTACGACGATCAACAACACCCAGGAAGAAGATCAAAGGACCGGAAAACCAGAATCGAACTATGTCAACATCAAGGTCAACGGACAGGATGGAAGTGAAGTGTT
TTTCAAGGTTGGGAAAAAAACCCAATTGATGAAACTTATGAATAAGTATTGTGAACGACAAGGTTTGGATCTGAAGGTTCTTGCATTTCTGATCGACGGTCATCTTATTT
CCGGAACCCAAACTGCTGATGAGCTGGGATTGAAAGATGGTGATGAAATTGACGCGATGAAACATCACGGTGGCGGCGGCGGAGCAAAATGGGTGTCGCTCTGA
mRNA sequenceShow/hide mRNA sequence
TGAGAATTATCGGAACAAAAATGTCTGGTACGACGATCAACAACACCCAGGAAGAAGATCAAAGGACCGGAAAACCAGAATCGAACTATGTCAACATCAAGGTCAACGGA
CAGGATGGAAGTGAAGTGTTTTTCAAGGTTGGGAAAAAAACCCAATTGATGAAACTTATGAATAAGTATTGTGAACGACAAGGTTTGGATCTGAAGGTTCTTGCATTTCT
GATCGACGGTCATCTTATTTCCGGAACCCAAACTGCTGATGAGCTGGGATTGAAAGATGGTGATGAAATTGACGCGATGAAACATCACGGTGGCGGCGGCGGAGCAAAAT
GGGTGTCGCTCTGAGAAATTGGGAGTGGTCCGGCGAAGTGGCATTTTTGTAATTTTGGTTTAAATGATG
Protein sequenceShow/hide protein sequence
MSGTTINNTQEEDQRTGKPESNYVNIKVNGQDGSEVFFKVGKKTQLMKLMNKYCERQGLDLKVLAFLIDGHLISGTQTADELGLKDGDEIDAMKHHGGGGGAKWVSL