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Sed0006980 (gene) of Chayote v1 genome

Gene IDSed0006980
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG11:1900146..1900546
RNA-Seq ExpressionSed0006980
SyntenySed0006980
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063581.1 hypothetical protein E6C27_scaffold329G00910 [Cucumis melo var. makuwa]8.3e-1654.55Show/hide
Query:  MAFFVIKTVAATATAIVLILLCLSYTSAARVLKEER----RLRAPVPPSGRNPCTFIPGLGHGRCTLAEGEDGEGS--GGSSAFSSMNFDGFVAASVVNQ
        MAF ++KTV     A + I L +   S  R L   R     LR PVP S RNPC+FIPG   GRCTL+E +DG  S  GGSSAF  +N DGF AAS+VNQ
Subjt:  MAFFVIKTVAATATAIVLILLCLSYTSAARVLKEER----RLRAPVPPSGRNPCTFIPGLGHGRCTLAEGEDGEGS--GGSSAFSSMNFDGFVAASVVNQ

Query:  TEKQDPSLSS
        T+KQD SLSS
Subjt:  TEKQDPSLSS

KAG6586324.1 hypothetical protein SDJN03_19057, partial [Cucurbita argyrosperma subsp. sororia]3.5e-2262.83Show/hide
Query:  MAFFVIKTVAATATAIVLILLCLSYTSAARVLKEE-------RRLRAPVPPSGRNPCTFIPGLGHGRCTLAEGED----GEGSGGSSAFSSMNFDGFVAA
        M F V+KT AA   A V ILLC+ + SAARVL  E       R LR  VPPSGRNPC+FIPGLG GRCTL+E ED    G G GGSSAF  MNFDGF AA
Subjt:  MAFFVIKTVAATATAIVLILLCLSYTSAARVLKEE-------RRLRAPVPPSGRNPCTFIPGLGHGRCTLAEGED----GEGSGGSSAFSSMNFDGFVAA

Query:  SVVNQTEKQDPSL
        ++VN T+KQDPSL
Subjt:  SVVNQTEKQDPSL

KAG6599331.1 hypothetical protein SDJN03_09109, partial [Cucurbita argyrosperma subsp. sororia]2.7e-1455.68Show/hide
Query:  SAARVLKEERRLRAP----------VPPSGRNPCTFIPGLGHGRCTLAEGEDGEGS--GGSSAFSSMNFDGFVAASVVNQTEKQDPSL
        SAARV+  ER L AP          VP S RNPC+FIPG   GRCTL+E +DG  +  GGSSA S +N DGF AAS+ N+T+K+DPSL
Subjt:  SAARVLKEERRLRAP----------VPPSGRNPCTFIPGLGHGRCTLAEGEDGEGS--GGSSAFSSMNFDGFVAASVVNQTEKQDPSL

KGN60782.1 hypothetical protein Csa_019261 [Cucumis sativus]2.0e-1754.31Show/hide
Query:  MAFFVIKTVAATATAIVLILLCLSYTSAARVLKEER----------RLRAPVPPSGRNPCTFIPGLGHGRCTLAEGEDGEGS--GGSSAFSSMNFDGFVA
        MAF ++KTV     A + I L +   SAARVL  ER           LR PVP S RNPC+FIPG   GRCTL+E ++G+ S  GGSSAF  +N DGF A
Subjt:  MAFFVIKTVAATATAIVLILLCLSYTSAARVLKEER----------RLRAPVPPSGRNPCTFIPGLGHGRCTLAEGEDGEGS--GGSSAFSSMNFDGFVA

Query:  ASVVNQTEKQDPSLSS
        ASVVNQT+KQD S+SS
Subjt:  ASVVNQTEKQDPSLSS

XP_021888699.1 uncharacterized protein LOC110807772 [Carica papaya]8.6e-0544.14Show/hide
Query:  TVAATATAIVLILLCLSY-TSAARVLKEERRL----------RAPVPPSGRNPCTFIPGLGHGRCTLAEGEDGEGS---GGSSAFSSMNFD-GFVAA--S
        T+A  A A++L+   L   T+A R+L EE+ L          R PVPPSG NPCTFIPG   GRCTL+E  D  G      ++AF  +  D G V A  S
Subjt:  TVAATATAIVLILLCLSY-TSAARVLKEERRL----------RAPVPPSGRNPCTFIPGLGHGRCTLAEGEDGEGS---GGSSAFSSMNFD-GFVAA--S

Query:  VVNQTEKQDPS
          N+T+KQD S
Subjt:  VVNQTEKQDPS

TrEMBL top hitse value%identityAlignment
A0A0A0LJ84 Uncharacterized protein9.6e-1854.31Show/hide
Query:  MAFFVIKTVAATATAIVLILLCLSYTSAARVLKEER----------RLRAPVPPSGRNPCTFIPGLGHGRCTLAEGEDGEGS--GGSSAFSSMNFDGFVA
        MAF ++KTV     A + I L +   SAARVL  ER           LR PVP S RNPC+FIPG   GRCTL+E ++G+ S  GGSSAF  +N DGF A
Subjt:  MAFFVIKTVAATATAIVLILLCLSYTSAARVLKEER----------RLRAPVPPSGRNPCTFIPGLGHGRCTLAEGEDGEGS--GGSSAFSSMNFDGFVA

Query:  ASVVNQTEKQDPSLSS
        ASVVNQT+KQD S+SS
Subjt:  ASVVNQTEKQDPSLSS

A0A5A7VCY2 Uncharacterized protein4.0e-1654.55Show/hide
Query:  MAFFVIKTVAATATAIVLILLCLSYTSAARVLKEER----RLRAPVPPSGRNPCTFIPGLGHGRCTLAEGEDGEGS--GGSSAFSSMNFDGFVAASVVNQ
        MAF ++KTV     A + I L +   S  R L   R     LR PVP S RNPC+FIPG   GRCTL+E +DG  S  GGSSAF  +N DGF AAS+VNQ
Subjt:  MAFFVIKTVAATATAIVLILLCLSYTSAARVLKEER----RLRAPVPPSGRNPCTFIPGLGHGRCTLAEGEDGEGS--GGSSAFSSMNFDGFVAASVVNQ

Query:  TEKQDPSLSS
        T+KQD SLSS
Subjt:  TEKQDPSLSS

A0A5B6Z7Q1 Uncharacterized protein (Fragment)2.9e-0642.72Show/hide
Query:  IVLILLCLSYTSAARVLKEERRL----------RAPVPPSGRNPCTFIPGLGHGRCTLAE-------GEDGEGSGGSSAFSSMNFDGFVAASVVNQTEKQ
        I+  +LC    SA R L+EE+ L          R PVP SG NPCT+IPG G GRCTLAE       G D       +AF       F AAS  N T K+
Subjt:  IVLILLCLSYTSAARVLKEERRL----------RAPVPPSGRNPCTFIPGLGHGRCTLAE-------GEDGEGSGGSSAFSSMNFDGFVAASVVNQTEKQ

Query:  DPS
        D S
Subjt:  DPS

A0A5B6Z868 Uncharacterized protein1.1e-0546.51Show/hide
Query:  SAARVLKEERRL----------RAPVPPSGRNPCTFIPGLGHGRCTLAEGE---DGEGSGGSSAFSSMNFDGFVAASVVNQTEKQD
        SA R L+EE+RL          R PVP SG NPCT+IPG G GRCTLAE E    GE    +          F AAS  N T+K+D
Subjt:  SAARVLKEERRL----------RAPVPPSGRNPCTFIPGLGHGRCTLAEGE---DGEGSGGSSAFSSMNFDGFVAASVVNQTEKQD

A0A6A4KR04 Uncharacterized protein (Fragment)7.9e-0447.76Show/hide
Query:  RAPVPPSGRNPCTFIPGLGHGRCTLAEGEDG----EGSGGSSAFSSMNFDGFVAASVVNQTEKQDPS
        R PV PSG NPCT+IPG   GRCTLAE E       G     AF  +    F  AS  N + KQD S
Subjt:  RAPVPPSGRNPCTFIPGLGHGRCTLAEGEDG----EGSGGSSAFSSMNFDGFVAASVVNQTEKQDPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTTTTTGTGATCAAGACGGTGGCCGCGACGGCGACGGCGATCGTTTTAATTCTTCTCTGTCTTTCTTACACGTCGGCAGCGAGGGTCTTAAAGGAGGAGCGGCG
GTTGCGAGCTCCGGTGCCTCCTTCGGGTAGAAATCCTTGTACGTTCATTCCCGGGCTCGGTCATGGACGCTGCACATTGGCCGAGGGGGAAGACGGTGAAGGTAGCGGCG
GATCCTCGGCCTTCTCGAGCATGAACTTCGATGGGTTTGTGGCGGCTTCTGTGGTTAACCAAACCGAGAAGCAAGATCCTTCTTTGAGCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ACTTATTCTACAATCCCCAAATCTCCAACTTCTTTGTTACGTATATGGCTTTTTTTGTGATCAAGACGGTGGCCGCGACGGCGACGGCGATCGTTTTAATTCTTCTCTGT
CTTTCTTACACGTCGGCAGCGAGGGTCTTAAAGGAGGAGCGGCGGTTGCGAGCTCCGGTGCCTCCTTCGGGTAGAAATCCTTGTACGTTCATTCCCGGGCTCGGTCATGG
ACGCTGCACATTGGCCGAGGGGGAAGACGGTGAAGGTAGCGGCGGATCCTCGGCCTTCTCGAGCATGAACTTCGATGGGTTTGTGGCGGCTTCTGTGGTTAACCAAACCG
AGAAGCAAGATCCTTCTTTGAGCTCTTGAACTCATGGGGGGAATAGAATTCTGAATCAAAGTTGAGTTTTG
Protein sequenceShow/hide protein sequence
MAFFVIKTVAATATAIVLILLCLSYTSAARVLKEERRLRAPVPPSGRNPCTFIPGLGHGRCTLAEGEDGEGSGGSSAFSSMNFDGFVAASVVNQTEKQDPSLSS