; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0007004 (gene) of Chayote v1 genome

Gene IDSed0007004
OrganismSechium edule (Chayote v1)
Descriptionpolyadenylate-binding protein 2-like
Genome locationLG07:8895343..8900918
RNA-Seq ExpressionSed0007004
SyntenySed0007004
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008462875.1 PREDICTED: polyadenylate-binding protein 2-like isoform X2 [Cucumis melo]6.6e-9490.1Show/hide
Query:  MEHEDDVDMVASDHPNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRI
        MEH DD+DM+ SD  NDAVELDDMKKRLK+MEDEAAALREMQAKVEKEM+SVQDP SA+ASQAN+EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRI
Subjt:  MEHEDDVDMVASDHPNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRI

Query:  TIRTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYGKVPRFRMPSRYGP
        TIRTDKFGQPKGYAYVEFVEPEAVQEA+LLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSR PYVA   PYF +P+GYGKVPRFRMP+RYGP
Subjt:  TIRTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYGKVPRFRMPSRYGP

Query:  YY
        YY
Subjt:  YY

XP_011653386.1 polyadenylate-binding protein 2 isoform X1 [Cucumis sativus]3.6e-9288.41Show/hide
Query:  MEHEDDVDMVASDHPNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRI
        MEH DDVDM+ SD  NDAVELDDMKKRLK+MEDEAAALREMQAKVEKEM+SVQDP SA+ASQAN+EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRI
Subjt:  MEHEDDVDMVASDHPNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRI

Query:  TIRTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYG-----KVPRFRMP
        TIRTDKFGQPKGYAYVEFVEPEAVQEA+LLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSR PYVA   PYF +P+GYG     KVPRFRMP
Subjt:  TIRTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYG-----KVPRFRMP

Query:  SRYGPYY
        +RYGPYY
Subjt:  SRYGPYY

XP_011653388.1 polyadenylate-binding protein 2 isoform X3 [Cucumis sativus]5.1e-9490.59Show/hide
Query:  MEHEDDVDMVASDHPNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRI
        MEH DDVDM+ SD  NDAVELDDMKKRLK+MEDEAAALREMQAKVEKEM+SVQDP SA+ASQAN+EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRI
Subjt:  MEHEDDVDMVASDHPNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRI

Query:  TIRTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYGKVPRFRMPSRYGP
        TIRTDKFGQPKGYAYVEFVEPEAVQEA+LLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSR PYVA   PYF +P+GYGKVPRFRMP+RYGP
Subjt:  TIRTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYGKVPRFRMPSRYGP

Query:  YY
        YY
Subjt:  YY

XP_022140995.1 polyadenylate-binding protein 2-like isoform X1 [Momordica charantia]4.3e-9389.11Show/hide
Query:  MEHEDDVDMVASDHPNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRI
        MEHE D+DM+ S+  NDAVELDDMKKRLKEMEDEAAALREMQAKVEKEM+SVQDP SA+ASQAN+EEVD+RSVFVGNVDYSCTPEEVQQHFQSCGTVNRI
Subjt:  MEHEDDVDMVASDHPNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRI

Query:  TIRTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYGKVPRFRMPSRYGP
        TIRTDKFGQPKGYAYVEF+EPEAVQEA+LLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSR PYVA   PYF +P+GYGKVPRFRMP+RYGP
Subjt:  TIRTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYGKVPRFRMPSRYGP

Query:  YY
        YY
Subjt:  YY

XP_038877304.1 polyadenylate-binding protein 2-like [Benincasa hispida]5.1e-9490.59Show/hide
Query:  MEHEDDVDMVASDHPNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRI
        MEH DDVDM+ SD  NDAVELDDMKKRLK+MEDEAAALREMQAKVEKEM+SVQDP SA+ASQAN+EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRI
Subjt:  MEHEDDVDMVASDHPNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRI

Query:  TIRTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYGKVPRFRMPSRYGP
        TIRTDKFGQPKGYAYVEFVEPEAVQEA+LLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSR PYVA   PYF +P+GYGKVPRFRMP+RYGP
Subjt:  TIRTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYGKVPRFRMPSRYGP

Query:  YY
        YY
Subjt:  YY

TrEMBL top hitse value%identityAlignment
A0A0A0KXZ1 RRM domain-containing protein2.5e-9490.59Show/hide
Query:  MEHEDDVDMVASDHPNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRI
        MEH DDVDM+ SD  NDAVELDDMKKRLK+MEDEAAALREMQAKVEKEM+SVQDP SA+ASQAN+EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRI
Subjt:  MEHEDDVDMVASDHPNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRI

Query:  TIRTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYGKVPRFRMPSRYGP
        TIRTDKFGQPKGYAYVEFVEPEAVQEA+LLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSR PYVA   PYF +P+GYGKVPRFRMP+RYGP
Subjt:  TIRTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYGKVPRFRMPSRYGP

Query:  YY
        YY
Subjt:  YY

A0A1S3CHX7 polyadenylate-binding protein 2-like isoform X23.2e-9490.1Show/hide
Query:  MEHEDDVDMVASDHPNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRI
        MEH DD+DM+ SD  NDAVELDDMKKRLK+MEDEAAALREMQAKVEKEM+SVQDP SA+ASQAN+EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRI
Subjt:  MEHEDDVDMVASDHPNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRI

Query:  TIRTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYGKVPRFRMPSRYGP
        TIRTDKFGQPKGYAYVEFVEPEAVQEA+LLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSR PYVA   PYF +P+GYGKVPRFRMP+RYGP
Subjt:  TIRTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYGKVPRFRMPSRYGP

Query:  YY
        YY
Subjt:  YY

A0A1S3CIE7 polyadenylate-binding protein 2-like isoform X12.3e-9287.92Show/hide
Query:  MEHEDDVDMVASDHPNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRI
        MEH DD+DM+ SD  NDAVELDDMKKRLK+MEDEAAALREMQAKVEKEM+SVQDP SA+ASQAN+EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRI
Subjt:  MEHEDDVDMVASDHPNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRI

Query:  TIRTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYG-----KVPRFRMP
        TIRTDKFGQPKGYAYVEFVEPEAVQEA+LLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSR PYVA   PYF +P+GYG     KVPRFRMP
Subjt:  TIRTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYG-----KVPRFRMP

Query:  SRYGPYY
        +RYGPYY
Subjt:  SRYGPYY

A0A5A7V2R3 Polyadenylate-binding protein 2-like isoform X23.2e-9490.1Show/hide
Query:  MEHEDDVDMVASDHPNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRI
        MEH DD+DM+ SD  NDAVELDDMKKRLK+MEDEAAALREMQAKVEKEM+SVQDP SA+ASQAN+EEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRI
Subjt:  MEHEDDVDMVASDHPNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRI

Query:  TIRTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYGKVPRFRMPSRYGP
        TIRTDKFGQPKGYAYVEFVEPEAVQEA+LLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSR PYVA   PYF +P+GYGKVPRFRMP+RYGP
Subjt:  TIRTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYGKVPRFRMPSRYGP

Query:  YY
        YY
Subjt:  YY

A0A6J1CGQ3 polyadenylate-binding protein 2-like isoform X12.1e-9389.11Show/hide
Query:  MEHEDDVDMVASDHPNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRI
        MEHE D+DM+ S+  NDAVELDDMKKRLKEMEDEAAALREMQAKVEKEM+SVQDP SA+ASQAN+EEVD+RSVFVGNVDYSCTPEEVQQHFQSCGTVNRI
Subjt:  MEHEDDVDMVASDHPNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRI

Query:  TIRTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYGKVPRFRMPSRYGP
        TIRTDKFGQPKGYAYVEF+EPEAVQEA+LLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSR PYVA   PYF +P+GYGKVPRFRMP+RYGP
Subjt:  TIRTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYGKVPRFRMPSRYGP

Query:  YY
        YY
Subjt:  YY

SwissProt top hitse value%identityAlignment
O14327 Polyadenylate-binding protein 26.1e-3453.9Show/hide
Query:  ELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKF-GQPKGYAYVEF
        EL +MK+R+ EME EAA LR MQ +++ E  ++++         +KE +D++SV+VGNVDYS TPEE+Q HF SCG+VNR+TI  DKF G PKG+AY+EF
Subjt:  ELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKF-GQPKGYAYVEF

Query:  VEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPY
         EP  V  A+LLN S LH R LKVT KRTN+PGM + R R      G R RG Y
Subjt:  VEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPY

Q8CCS6 Polyadenylate-binding protein 22.2e-3144.57Show/hide
Query:  EHEDDVDMVASDHPNDAV---ELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSAS---ASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCG
        E E++  +V +D  + A+   EL+ +K R++EME+EA  L+E+Q +VEK+M     PG+A     S   K E D+RS++VGNVDY  T EE++ HF  CG
Subjt:  EHEDDVDMVASDHPNDAV---ELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSAS---ASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCG

Query:  TVNRITIRTDKF-GQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGM---------KQYRPRRSNPFMGARSR
        +VNR+TI  DKF G PKG+AY+EF + E+V+ ++ L+ES   GRQ+KV  KRTN PG+          +YR R +N +  +RSR
Subjt:  TVNRITIRTDKF-GQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGM---------KQYRPRRSNPFMGARSR

Q93VI4 Polyadenylate-binding protein 12.0e-6162.75Show/hide
Query:  EHEDDVDMVASDHP----NDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTV
        EH  +    A D      + + +L+DMKKR+KE+E+EA ALREMQAK EK+M + QDP S   S A KEEVDSRS++VGNVDY+CTPEEVQQHFQSCGTV
Subjt:  EHEDDVDMVASDHP----NDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTV

Query:  NRITIRTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYGKVPRFRMPSR
        NR+TI TDKFGQPKG+AYVEFVE EAVQ +++LNESELHGRQ+KV+AKRTN+PGM+Q+R  R  PF   R   P V      F  P+ YG+VPRFR P R
Subjt:  NRITIRTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYGKVPRFRMPSR

Query:  YGPY
        Y PY
Subjt:  YGPY

Q9FJN9 Polyadenylate-binding protein 21.0e-7374.11Show/hide
Query:  DVDMVASDHPNDAV-ELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRT
        D+DM A+D  +DAV ELD+MKKRLKEMEDEAAALREMQAKVEKEM   QDP S +A+QA KEEVD+RSVFVGNVDY+CTPEEVQQHFQ+CGTV+R+TI T
Subjt:  DVDMVASDHPNDAV-ELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRT

Query:  DKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYGKVPRFRMPSRYGPY
        DKFGQPKG+AYVEFVE EAVQEA+ LNESELHGRQLKV  KRTN+PG+KQ+R RR NP+MG R R P++   +PY  +P+GYGK PRFR P RY PY
Subjt:  DKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYGKVPRFRMPSRYGPY

Q9LX90 Polyadenylate-binding protein 35.7e-7271.86Show/hide
Query:  EDDVDMVASDHPNDAV-ELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
        + D+DM A+D   DAV EL +MK+RLKEME+EAAALREMQAKVEKEM + QDP S +A+Q  KEEVD+RSV+VGNVDY+CTPEEVQ HFQ+CGTVNR+TI
Subjt:  EDDVDMVASDHPNDAV-ELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI

Query:  RTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYGKVPRFRMPSRYGPY
          DKFGQPKG+AYVEFVE EAVQEA+ LNESELHGRQLKV+ KRTN+PGMKQY P R NP MG R R P+V    PYF +P+GYGK PRFR P RY PY
Subjt:  RTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYGKVPRFRMPSRYGPY

Arabidopsis top hitse value%identityAlignment
AT5G10350.1 RNA-binding (RRM/RBD/RNP motifs) family protein4.0e-7371.86Show/hide
Query:  EDDVDMVASDHPNDAV-ELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
        + D+DM A+D   DAV EL +MK+RLKEME+EAAALREMQAKVEKEM + QDP S +A+Q  KEEVD+RSV+VGNVDY+CTPEEVQ HFQ+CGTVNR+TI
Subjt:  EDDVDMVASDHPNDAV-ELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI

Query:  RTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYGKVPRFRMPSRYGPY
          DKFGQPKG+AYVEFVE EAVQEA+ LNESELHGRQLKV+ KRTN+PGMKQY P R NP MG R R P+V    PYF +P+GYGK PRFR P RY PY
Subjt:  RTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYGKVPRFRMPSRYGPY

AT5G10350.2 RNA-binding (RRM/RBD/RNP motifs) family protein9.6e-6771.89Show/hide
Query:  EDDVDMVASDHPNDAV-ELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI
        + D+DM A+D   DAV EL +MK+RLKEME+EAAALREMQAKVEKEM + QDP S +A+Q  KEEVD+RSV+VGNVDY+CTPEEVQ HFQ+CGTVNR+TI
Subjt:  EDDVDMVASDHPNDAV-ELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITI

Query:  RTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYG
          DKFGQPKG+AYVEFVE EAVQEA+ LNESELHGRQLKV+ KRTN+PGMKQY P R NP MG R R P+V    PYF +P+GYG
Subjt:  RTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYG

AT5G51120.1 polyadenylate-binding protein 11.4e-6262.75Show/hide
Query:  EHEDDVDMVASDHP----NDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTV
        EH  +    A D      + + +L+DMKKR+KE+E+EA ALREMQAK EK+M + QDP S   S A KEEVDSRS++VGNVDY+CTPEEVQQHFQSCGTV
Subjt:  EHEDDVDMVASDHP----NDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTV

Query:  NRITIRTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYGKVPRFRMPSR
        NR+TI TDKFGQPKG+AYVEFVE EAVQ +++LNESELHGRQ+KV+AKRTN+PGM+Q+R  R  PF   R   P V      F  P+ YG+VPRFR P R
Subjt:  NRITIRTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYGKVPRFRMPSR

Query:  YGPY
        Y PY
Subjt:  YGPY

AT5G51120.2 polyadenylate-binding protein 14.5e-5651.87Show/hide
Query:  EHEDDVDMVASDHP----NDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQ-------------------------------------DPGSASA
        EH  +    A D      + + +L+DMKKR+KE+E+EA ALREMQAK EK+M + Q                                     +  ++  
Subjt:  EHEDDVDMVASDHP----NDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQ-------------------------------------DPGSASA

Query:  SQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRS
        S A KEEVDSRS++VGNVDY+CTPEEVQQHFQSCGTVNR+TI TDKFGQPKG+AYVEFVE EAVQ +++LNESELHGRQ+KV+AKRTN+PGM+Q+R  R 
Subjt:  SQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRS

Query:  NPFMGARSRGPYVAAPTPYFIAPFGYGKVPRFRMPSRYGPY
         PF   R   P V      F  P+ YG+VPRFR P RY PY
Subjt:  NPFMGARSRGPYVAAPTPYFIAPFGYGKVPRFRMPSRYGPY

AT5G65260.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.3e-7574.11Show/hide
Query:  DVDMVASDHPNDAV-ELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRT
        D+DM A+D  +DAV ELD+MKKRLKEMEDEAAALREMQAKVEKEM   QDP S +A+QA KEEVD+RSVFVGNVDY+CTPEEVQQHFQ+CGTV+R+TI T
Subjt:  DVDMVASDHPNDAV-ELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRT

Query:  DKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYGKVPRFRMPSRYGPY
        DKFGQPKG+AYVEFVE EAVQEA+ LNESELHGRQLKV  KRTN+PG+KQ+R RR NP+MG R R P++   +PY  +P+GYGK PRFR P RY PY
Subjt:  DKFGQPKGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYGKVPRFRMPSRYGPY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCACGAAGATGACGTGGACATGGTTGCCTCCGACCACCCCAACGACGCCGTGGAGCTGGACGACATGAAGAAACGCCTGAAAGAGATGGAGGATGAAGCTGCTGC
CCTGCGCGAGATGCAGGCCAAGGTCGAGAAGGAAATGACCTCCGTGCAAGACCCAGGAAGTGCTTCTGCAAGTCAAGCAAATAAGGAGGAAGTGGATTCACGCTCAGTGT
TTGTTGGCAATGTTGACTACTCGTGTACCCCAGAAGAAGTACAGCAACATTTCCAGTCATGTGGAACTGTAAACAGAATCACTATTCGCACCGATAAGTTTGGGCAACCA
AAGGGTTATGCGTATGTTGAATTCGTCGAGCCAGAAGCTGTTCAAGAGGCTATTCTTTTGAATGAATCAGAACTACATGGTCGGCAGCTGAAGGTAACTGCCAAGAGAAC
AAACATACCTGGAATGAAGCAGTATCGTCCACGCCGATCCAATCCATTTATGGGGGCTCGATCCAGGGGCCCATATGTCGCTGCTCCAACTCCATATTTTATCGCGCCAT
TTGGATACGGGAAAGTCCCGAGGTTCCGAATGCCATCGCGTTACGGCCCCTATTATTAA
mRNA sequenceShow/hide mRNA sequence
GGAAAATATAGAGGAGCCGGTTTGAAGGCGAAGTTTACTGCAACTCCGTCGAGAGAGAAAAGGGGGGAAAGAGAGAGAAACGAATCGCCGGAGAAGAAGAAGAAGAAGAA
GAAGAAGAATCGATGGAGCACGAAGATGACGTGGACATGGTTGCCTCCGACCACCCCAACGACGCCGTGGAGCTGGACGACATGAAGAAACGCCTGAAAGAGATGGAGGA
TGAAGCTGCTGCCCTGCGCGAGATGCAGGCCAAGGTCGAGAAGGAAATGACCTCCGTGCAAGACCCAGGAAGTGCTTCTGCAAGTCAAGCAAATAAGGAGGAAGTGGATT
CACGCTCAGTGTTTGTTGGCAATGTTGACTACTCGTGTACCCCAGAAGAAGTACAGCAACATTTCCAGTCATGTGGAACTGTAAACAGAATCACTATTCGCACCGATAAG
TTTGGGCAACCAAAGGGTTATGCGTATGTTGAATTCGTCGAGCCAGAAGCTGTTCAAGAGGCTATTCTTTTGAATGAATCAGAACTACATGGTCGGCAGCTGAAGGTAAC
TGCCAAGAGAACAAACATACCTGGAATGAAGCAGTATCGTCCACGCCGATCCAATCCATTTATGGGGGCTCGATCCAGGGGCCCATATGTCGCTGCTCCAACTCCATATT
TTATCGCGCCATTTGGATACGGGAAAGTCCCGAGGTTCCGAATGCCATCGCGTTACGGCCCCTATTATTAAATGTCAGTTTTGTTTGGGGAGCTGTTCAATCAGAGATAT
CACACTTGAATGTTTGCATGCCCTTTCTTTTTATTTATGATGTAAACTGATGATGTTTGGATATAATTTCAAGAGATCTTTTTTGTTTATAAGAAATGAACTGTGGCATG
CTCGATGCAGGTTCAACCTCGATTACAAAGTGTAAAGAAAAAGGCTCTCTGGACTTGCAGCAGGTAGCTTTCAAGATTTAAGTATTCCCTTTGAATTGCATGCTCGTATT
TTTAGTAATTTAAGTCGAG
Protein sequenceShow/hide protein sequence
MEHEDDVDMVASDHPNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMTSVQDPGSASASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQP
KGYAYVEFVEPEAVQEAILLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRGPYVAAPTPYFIAPFGYGKVPRFRMPSRYGPYY