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Sed0007048 (gene) of Chayote v1 genome

Gene IDSed0007048
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG11:1904076..1904372
RNA-Seq ExpressionSed0007048
SyntenySed0007048
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063581.1 hypothetical protein E6C27_scaffold329G00910 [Cucumis melo var. makuwa]2.7e-1651.96Show/hide
Query:  SVINTAAVVIVLLCLSSTSVARVLERQ------LRAPVPPSGRNPCTFIPGLGHGRSTLAEVEDGTDA--GGSSVFPGMNFEGFRAASLVNQTEKQDPSL
        S++ T A + + L +   SV R L         LR PVP S RNPC+FIPG   GR TL+EV+DG  +  GGSS FPG+N +GF AAS+VNQT+KQD SL
Subjt:  SVINTAAVVIVLLCLSSTSVARVLERQ------LRAPVPPSGRNPCTFIPGLGHGRSTLAEVEDGTDA--GGSSVFPGMNFEGFRAASLVNQTEKQDPSL

Query:  RS
         S
Subjt:  RS

KAG6586324.1 hypothetical protein SDJN03_19057, partial [Cucurbita argyrosperma subsp. sororia]9.5e-2260.19Show/hide
Query:  SVINT--AAVVIVLLCLSSTSVARVL---------ERQLRAPVPPSGRNPCTFIPGLGHGRSTLAEVED----GTDAGGSSVFPGMNFEGFRAASLVNQT
        SV+ T  AA V +LLC+   S ARVL         +R LR  VPPSGRNPC+FIPGLG GR TL+EVED    G   GGSS FPGMNF+GF AA++VN T
Subjt:  SVINT--AAVVIVLLCLSSTSVARVL---------ERQLRAPVPPSGRNPCTFIPGLGHGRSTLAEVED----GTDAGGSSVFPGMNFEGFRAASLVNQT

Query:  EKQDPSLR
        +KQDPSLR
Subjt:  EKQDPSLR

KAG6599331.1 hypothetical protein SDJN03_09109, partial [Cucurbita argyrosperma subsp. sororia]3.6e-1356.76Show/hide
Query:  RVLERQLRAPVPPSGRNPCTFIPGLGHGRSTLAEVEDGTDA--GGSSVFPGMNFEGFRAASLVNQTEKQDPSLR
        RV    LR  VP S RNPC+FIPG   GR TL+E +DG  A  GGSS   G+N +GF AAS+ N+T+K+DPSLR
Subjt:  RVLERQLRAPVPPSGRNPCTFIPGLGHGRSTLAEVEDGTDA--GGSSVFPGMNFEGFRAASLVNQTEKQDPSLR

KGN60782.1 hypothetical protein Csa_019261 [Cucumis sativus]1.7e-1548.15Show/hide
Query:  SVINTAAVVIVLLCLSSTSVARVLERQ------------LRAPVPPSGRNPCTFIPGLGHGRSTLAEVEDGTDA--GGSSVFPGMNFEGFRAASLVNQTE
        S++ T A + + L +   S ARVL  +            LR PVP S RNPC+FIPG   GR TL+EV++G  +  GGSS FPG+N +GF AAS+VNQT+
Subjt:  SVINTAAVVIVLLCLSSTSVARVLERQ------------LRAPVPPSGRNPCTFIPGLGHGRSTLAEVEDGTDA--GGSSVFPGMNFEGFRAASLVNQTE

Query:  KQDPSLRS
        KQD S+ S
Subjt:  KQDPSLRS

TrEMBL top hitse value%identityAlignment
A0A0A0LJ84 Uncharacterized protein8.4e-1648.15Show/hide
Query:  SVINTAAVVIVLLCLSSTSVARVLERQ------------LRAPVPPSGRNPCTFIPGLGHGRSTLAEVEDGTDA--GGSSVFPGMNFEGFRAASLVNQTE
        S++ T A + + L +   S ARVL  +            LR PVP S RNPC+FIPG   GR TL+EV++G  +  GGSS FPG+N +GF AAS+VNQT+
Subjt:  SVINTAAVVIVLLCLSSTSVARVLERQ------------LRAPVPPSGRNPCTFIPGLGHGRSTLAEVEDGTDA--GGSSVFPGMNFEGFRAASLVNQTE

Query:  KQDPSLRS
        KQD S+ S
Subjt:  KQDPSLRS

A0A5A7VCY2 Uncharacterized protein1.3e-1651.96Show/hide
Query:  SVINTAAVVIVLLCLSSTSVARVLERQ------LRAPVPPSGRNPCTFIPGLGHGRSTLAEVEDGTDA--GGSSVFPGMNFEGFRAASLVNQTEKQDPSL
        S++ T A + + L +   SV R L         LR PVP S RNPC+FIPG   GR TL+EV+DG  +  GGSS FPG+N +GF AAS+VNQT+KQD SL
Subjt:  SVINTAAVVIVLLCLSSTSVARVLERQ------LRAPVPPSGRNPCTFIPGLGHGRSTLAEVEDGTDA--GGSSVFPGMNFEGFRAASLVNQTEKQDPSL

Query:  RS
         S
Subjt:  RS

A0A5B6Z7Q1 Uncharacterized protein (Fragment)2.0e-0438.24Show/hide
Query:  VVIVLLCLSSTSVARVLERQL------------RAPVPPSGRNPCTFIPGLGHGRSTLAEVEDGTDAGGSSVFPGMN------FEGFRAASLVNQTEKQD
        ++  +LC    S  R LE +             R PVP SG NPCT+IPG G GR TLAE E     G  +V P            F AAS  N T K+D
Subjt:  VVIVLLCLSSTSVARVLERQL------------RAPVPPSGRNPCTFIPGLGHGRSTLAEVEDGTDAGGSSVFPGMN------FEGFRAASLVNQTEKQD

Query:  PS
         S
Subjt:  PS

A0A5B6Z868 Uncharacterized protein7.4e-0449.23Show/hide
Query:  RAPVPPSGRNPCTFIPGLGHGRSTLAEVE----DGTDAGGSSVFPGMNFEGFRAASLVNQTEKQD
        R PVP SG NPCT+IPG G GR TLAE E        A     FP      F AAS  N T+K+D
Subjt:  RAPVPPSGRNPCTFIPGLGHGRSTLAEVE----DGTDAGGSSVFPGMNFEGFRAASLVNQTEKQD

A0A5C7I9N7 Uncharacterized protein7.4e-0445Show/hide
Query:  VLERQLRAPVPPSGRNPCTFIPGLGHGRSTLAEVEDGTDAG-GSSVFPGMNFEGFRAASL
        +++   + PVPP+G NPCTFIPG G GR TL+E++    A     VFP      F AAS+
Subjt:  VLERQLRAPVPPSGRNPCTFIPGLGHGRSTLAEVEDGTDAG-GSSVFPGMNFEGFRAASL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTCTTCGGTTATCAACACGGCAGCGGTCGTTATCGTTCTTCTCTGTCTTTCTTCCACGTCGGTGGCTAGGGTCTTGGAGAGGCAATTGCGAGCTCCGGTGCC
TCCTTCCGGGAGGAATCCTTGTACGTTTATCCCCGGGCTCGGTCATGGACGGAGCACGTTGGCGGAGGTGGAAGATGGGACCGACGCGGGTGGCTCCTCCGTCTTCCCCG
GCATGAATTTTGAAGGGTTTAGGGCGGCTTCCTTGGTTAACCAAACCGAGAAGCAAGATCCTTCTTTGAGATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTTCTTCGGTTATCAACACGGCAGCGGTCGTTATCGTTCTTCTCTGTCTTTCTTCCACGTCGGTGGCTAGGGTCTTGGAGAGGCAATTGCGAGCTCCGGTGCC
TCCTTCCGGGAGGAATCCTTGTACGTTTATCCCCGGGCTCGGTCATGGACGGAGCACGTTGGCGGAGGTGGAAGATGGGACCGACGCGGGTGGCTCCTCCGTCTTCCCCG
GCATGAATTTTGAAGGGTTTAGGGCGGCTTCCTTGGTTAACCAAACCGAGAAGCAAGATCCTTCTTTGAGATCTTGA
Protein sequenceShow/hide protein sequence
MASSSVINTAAVVIVLLCLSSTSVARVLERQLRAPVPPSGRNPCTFIPGLGHGRSTLAEVEDGTDAGGSSVFPGMNFEGFRAASLVNQTEKQDPSLRS