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Sed0007061 (gene) of Chayote v1 genome

Gene IDSed0007061
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein
Genome locationLG05:31552881..31553479
RNA-Seq ExpressionSed0007061
SyntenySed0007061
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591490.1 hypothetical protein SDJN03_13836, partial [Cucurbita argyrosperma subsp. sororia]2.3e-4682.2Show/hide
Query:  METGIGAMSGRSRFSSYGRLAAVGFGLLAVVSPLYIDRRPSIETEEDEESFINLGFWLPVLLITLIFIIAGVLHLEQRCARFDAYWIHRVGGSSGGILII
        ME GIGA S RSRFSSY R  AVG G+LAVVSPLYIDRRPS + EE+EES +NLGFWLP LLITLIFIIAGVLHLEQRCARFDAYWIHRVGGSS GI I+
Subjt:  METGIGAMSGRSRFSSYGRLAAVGFGLLAVVSPLYIDRRPSIETEEDEESFINLGFWLPVLLITLIFIIAGVLHLEQRCARFDAYWIHRVGGSSGGILII

Query:  LLLLVFVLKCKASLMFWE
        LLLL FVLKCKASLM W+
Subjt:  LLLLVFVLKCKASLMFWE
XP_008452787.1 PREDICTED: uncharacterized protein LOC103493702 [Cucumis melo]1.4e-4684.03Show/hide
Query:  METGIGAMSGRSRFSSYGRLAAVGFGLLAVVSPLYIDRRPSIETEEDEESFINLGFWLPVLLITLIFIIAGVLHLEQRCARFDAYWIHRVGGSSGGILII
        ME G+GAMS RSRFSSY R  AVG GLLAVVSPLYIDRRPSIE  E+EES I+LGFWLP LLI LIFIIAGVLHLEQRCARFD YWIHRVGGSS GI II
Subjt:  METGIGAMSGRSRFSSYGRLAAVGFGLLAVVSPLYIDRRPSIETEEDEESFINLGFWLPVLLITLIFIIAGVLHLEQRCARFDAYWIHRVGGSSGGILII

Query:  LLLLVFVLKCKASLMFWEA
        LLLL FVLKCKASLMFWE+
Subjt:  LLLLVFVLKCKASLMFWEA
XP_022936874.1 uncharacterized protein LOC111443331 [Cucurbita moschata]4.7e-4783.05Show/hide
Query:  METGIGAMSGRSRFSSYGRLAAVGFGLLAVVSPLYIDRRPSIETEEDEESFINLGFWLPVLLITLIFIIAGVLHLEQRCARFDAYWIHRVGGSSGGILII
        ME GIGA S RSRFSSY R  AVG G+LAVVSPLYIDRRPS + EE+EES +NLGFWLP LLITLIFIIAGVLHLEQRCARFDAYWIHRVGGSS GI I+
Subjt:  METGIGAMSGRSRFSSYGRLAAVGFGLLAVVSPLYIDRRPSIETEEDEESFINLGFWLPVLLITLIFIIAGVLHLEQRCARFDAYWIHRVGGSSGGILII

Query:  LLLLVFVLKCKASLMFWE
        LLLL FVLKCKASLMFW+
Subjt:  LLLLVFVLKCKASLMFWE
XP_022977145.1 uncharacterized protein LOC111477299 [Cucurbita maxima]1.0e-4682.2Show/hide
Query:  METGIGAMSGRSRFSSYGRLAAVGFGLLAVVSPLYIDRRPSIETEEDEESFINLGFWLPVLLITLIFIIAGVLHLEQRCARFDAYWIHRVGGSSGGILII
        ME GIGA S RSRFSSY R  AVG G+LAVVSPLYIDRRPS + EE+EES +NLGFWLP LL+TLIFIIAGVLHLEQRCARFDAYWIHRVGGSS GI I+
Subjt:  METGIGAMSGRSRFSSYGRLAAVGFGLLAVVSPLYIDRRPSIETEEDEESFINLGFWLPVLLITLIFIIAGVLHLEQRCARFDAYWIHRVGGSSGGILII

Query:  LLLLVFVLKCKASLMFWE
        LLLL FVLKCKASLMFW+
Subjt:  LLLLVFVLKCKASLMFWE
XP_038899620.1 uncharacterized protein LOC120086878 [Benincasa hispida]1.2e-4785.71Show/hide
Query:  METGIGAMSGRSRFSSYGRLAAVGFGLLAVVSPLYIDRRPSIETEEDEESFINLGFWLPVLLITLIFIIAGVLHLEQRCARFDAYWIHRVGGSSGGILII
        ME GIGA S RSRFSSY R  AVG GLLAVVSPLYIDRRPSIE  E+EES INLGFWLP LL+TLIFIIAGVLHLEQRCARFDAYWIHRVGGSS GI II
Subjt:  METGIGAMSGRSRFSSYGRLAAVGFGLLAVVSPLYIDRRPSIETEEDEESFINLGFWLPVLLITLIFIIAGVLHLEQRCARFDAYWIHRVGGSSGGILII

Query:  LLLLVFVLKCKASLMFWEA
        LLLL FVLKCKASLMFWE+
Subjt:  LLLLVFVLKCKASLMFWEA
TrEMBL top hitse value%identityAlignment
A0A0A0L2W6 Uncharacterized protein1.5e-4683.19Show/hide
Query:  METGIGAMSGRSRFSSYGRLAAVGFGLLAVVSPLYIDRRPSIETEEDEESFINLGFWLPVLLITLIFIIAGVLHLEQRCARFDAYWIHRVGGSSGGILII
        ME G+GAMS RSRFSSY R  AVG GLLAVVSPLYIDRRPSIE  E+EES I+LGFWLP LL+ LIFIIAGVLHLEQRCARFD YWIHRVGGSS GI II
Subjt:  METGIGAMSGRSRFSSYGRLAAVGFGLLAVVSPLYIDRRPSIETEEDEESFINLGFWLPVLLITLIFIIAGVLHLEQRCARFDAYWIHRVGGSSGGILII

Query:  LLLLVFVLKCKASLMFWEA
        LLLL FVLKCKASLMFWE+
Subjt:  LLLLVFVLKCKASLMFWEA
A0A1S3BUL9 uncharacterized protein LOC1034937026.6e-4784.03Show/hide
Query:  METGIGAMSGRSRFSSYGRLAAVGFGLLAVVSPLYIDRRPSIETEEDEESFINLGFWLPVLLITLIFIIAGVLHLEQRCARFDAYWIHRVGGSSGGILII
        ME G+GAMS RSRFSSY R  AVG GLLAVVSPLYIDRRPSIE  E+EES I+LGFWLP LLI LIFIIAGVLHLEQRCARFD YWIHRVGGSS GI II
Subjt:  METGIGAMSGRSRFSSYGRLAAVGFGLLAVVSPLYIDRRPSIETEEDEESFINLGFWLPVLLITLIFIIAGVLHLEQRCARFDAYWIHRVGGSSGGILII

Query:  LLLLVFVLKCKASLMFWEA
        LLLL FVLKCKASLMFWE+
Subjt:  LLLLVFVLKCKASLMFWEA
A0A5D3D907 Uncharacterized protein6.6e-4784.03Show/hide
Query:  METGIGAMSGRSRFSSYGRLAAVGFGLLAVVSPLYIDRRPSIETEEDEESFINLGFWLPVLLITLIFIIAGVLHLEQRCARFDAYWIHRVGGSSGGILII
        ME G+GAMS RSRFSSY R  AVG GLLAVVSPLYIDRRPSIE  E+EES I+LGFWLP LLI LIFIIAGVLHLEQRCARFD YWIHRVGGSS GI II
Subjt:  METGIGAMSGRSRFSSYGRLAAVGFGLLAVVSPLYIDRRPSIETEEDEESFINLGFWLPVLLITLIFIIAGVLHLEQRCARFDAYWIHRVGGSSGGILII

Query:  LLLLVFVLKCKASLMFWEA
        LLLL FVLKCKASLMFWE+
Subjt:  LLLLVFVLKCKASLMFWEA
A0A6J1F9J0 uncharacterized protein LOC1114433312.3e-4783.05Show/hide
Query:  METGIGAMSGRSRFSSYGRLAAVGFGLLAVVSPLYIDRRPSIETEEDEESFINLGFWLPVLLITLIFIIAGVLHLEQRCARFDAYWIHRVGGSSGGILII
        ME GIGA S RSRFSSY R  AVG G+LAVVSPLYIDRRPS + EE+EES +NLGFWLP LLITLIFIIAGVLHLEQRCARFDAYWIHRVGGSS GI I+
Subjt:  METGIGAMSGRSRFSSYGRLAAVGFGLLAVVSPLYIDRRPSIETEEDEESFINLGFWLPVLLITLIFIIAGVLHLEQRCARFDAYWIHRVGGSSGGILII

Query:  LLLLVFVLKCKASLMFWE
        LLLL FVLKCKASLMFW+
Subjt:  LLLLVFVLKCKASLMFWE
A0A6J1ILG7 uncharacterized protein LOC1114772995.0e-4782.2Show/hide
Query:  METGIGAMSGRSRFSSYGRLAAVGFGLLAVVSPLYIDRRPSIETEEDEESFINLGFWLPVLLITLIFIIAGVLHLEQRCARFDAYWIHRVGGSSGGILII
        ME GIGA S RSRFSSY R  AVG G+LAVVSPLYIDRRPS + EE+EES +NLGFWLP LL+TLIFIIAGVLHLEQRCARFDAYWIHRVGGSS GI I+
Subjt:  METGIGAMSGRSRFSSYGRLAAVGFGLLAVVSPLYIDRRPSIETEEDEESFINLGFWLPVLLITLIFIIAGVLHLEQRCARFDAYWIHRVGGSSGGILII

Query:  LLLLVFVLKCKASLMFWE
        LLLL FVLKCKASLMFW+
Subjt:  LLLLVFVLKCKASLMFWE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G21910.1 unknown protein1.4e-2050.88Show/hide
Query:  METGIGA-MSGRSRFSSYGRLAAVGFGLLAVVSPLYIDRRPSIETEEDEESFINLGFWLPVLLITLIFIIAGVLHLEQRCARFDAYWIHRVGGSSGGILI
        METG  + M G  RF++  +L A+   +LAV+SPLYIDR    + EE+EE F +  F   +LL+ LI  IA  L+ +    RFD YWIHR+ GS GG+L+
Subjt:  METGIGA-MSGRSRFSSYGRLAAVGFGLLAVVSPLYIDRRPSIETEEDEESFINLGFWLPVLLITLIFIIAGVLHLEQRCARFDAYWIHRVGGSSGGILI

Query:  ILLLLVFVLKCKAS
        IL+LLVFVL CKAS
Subjt:  ILLLLVFVLKCKAS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACCGGGATCGGTGCTATGTCGGGGAGGAGCCGGTTTTCTTCCTACGGCCGGCTGGCGGCCGTGGGATTCGGTCTTCTGGCGGTAGTTTCGCCACTCTATATCGA
CCGAAGACCGAGCATCGAGACGGAGGAGGACGAGGAATCATTCATTAACCTTGGCTTCTGGTTGCCTGTTCTTCTCATTACCTTGATCTTTATCATTGCTGGTGTGCTTC
ACTTGGAACAGAGATGTGCCAGGTTTGATGCTTATTGGATTCACAGGGTTGGTGGCTCTTCTGGTGGCATATTAATCATTCTTCTTCTTCTTGTATTTGTTTTGAAGTGT
AAAGCTTCTTTAATGTTTTGGGAGGCTTAG
mRNA sequenceShow/hide mRNA sequence
GCTTCATCAACACTCATTCTTCTCAAGAATAAATTCCCATTTCAGAAAACCAATAATATTCCCATTCTCCAAACAAGAAAGAAGCACCAAACAGTTTCACTGCAACAACA
CAAGACCAAGAGAGAACTAGAACTTAGTTTTTTCCATCTCCAAGAATGGAGACCGGGATCGGTGCTATGTCGGGGAGGAGCCGGTTTTCTTCCTACGGCCGGCTGGCGGC
CGTGGGATTCGGTCTTCTGGCGGTAGTTTCGCCACTCTATATCGACCGAAGACCGAGCATCGAGACGGAGGAGGACGAGGAATCATTCATTAACCTTGGCTTCTGGTTGC
CTGTTCTTCTCATTACCTTGATCTTTATCATTGCTGGTGTGCTTCACTTGGAACAGAGATGTGCCAGGTTTGATGCTTATTGGATTCACAGGGTTGGTGGCTCTTCTGGT
GGCATATTAATCATTCTTCTTCTTCTTGTATTTGTTTTGAAGTGTAAAGCTTCTTTAATGTTTTGGGAGGCTTAGGAGTTTACTATTCACCTTTCAAAGTTTTTTGTGTT
TGCTTGTTTCTGTGCCTTAAACTTTCAGGATACTTTTTAGTTTTATCAA
Protein sequenceShow/hide protein sequence
METGIGAMSGRSRFSSYGRLAAVGFGLLAVVSPLYIDRRPSIETEEDEESFINLGFWLPVLLITLIFIIAGVLHLEQRCARFDAYWIHRVGGSSGGILIILLLLVFVLKC
KASLMFWEA