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Sed0007062 (gene) of Chayote v1 genome

Gene IDSed0007062
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein
Genome locationLG13:24034715..24037886
RNA-Seq ExpressionSed0007062
SyntenySed0007062
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008452787.1 PREDICTED: uncharacterized protein LOC103493702 [Cucumis melo]2.3e-1580Show/hide
Query:  LIFTIAAMLQLEQRCARFGAYWIHRVGGSSSGIFVILLLLVFVLNCKASLMFWDS
        LIF IA +L LEQRCARF  YWIHRVGGSS GIF+ILLLL FVL CKASLMFW+S
Subjt:  LIFTIAAMLQLEQRCARFGAYWIHRVGGSSSGIFVILLLLVFVLNCKASLMFWDS
XP_011654202.1 uncharacterized protein LOC105435317 [Cucumis sativus]1.8e-1578.95Show/hide
Query:  MGLIFTIAAMLQLEQRCARFGAYWIHRVGGSSSGIFVILLLLVFVLNCKASLMFWDS
        M LIF IA +L LEQRCARF  YWIHRVGGSS GIF+ILLLL FVL CKASLMFW+S
Subjt:  MGLIFTIAAMLQLEQRCARFGAYWIHRVGGSSSGIFVILLLLVFVLNCKASLMFWDS
XP_022936874.1 uncharacterized protein LOC111443331 [Cucurbita moschata]1.0e-1581.48Show/hide
Query:  LIFTIAAMLQLEQRCARFGAYWIHRVGGSSSGIFVILLLLVFVLNCKASLMFWD
        LIF IA +L LEQRCARF AYWIHRVGGSS GIF++LLLL FVL CKASLMFWD
Subjt:  LIFTIAAMLQLEQRCARFGAYWIHRVGGSSSGIFVILLLLVFVLNCKASLMFWD
XP_022977145.1 uncharacterized protein LOC111477299 [Cucurbita maxima]4.6e-1680.36Show/hide
Query:  MGLIFTIAAMLQLEQRCARFGAYWIHRVGGSSSGIFVILLLLVFVLNCKASLMFWD
        M LIF IA +L LEQRCARF AYWIHRVGGSS GIF++LLLL FVL CKASLMFWD
Subjt:  MGLIFTIAAMLQLEQRCARFGAYWIHRVGGSSSGIFVILLLLVFVLNCKASLMFWD
XP_038899620.1 uncharacterized protein LOC120086878 [Benincasa hispida]2.7e-1680.7Show/hide
Query:  MGLIFTIAAMLQLEQRCARFGAYWIHRVGGSSSGIFVILLLLVFVLNCKASLMFWDS
        M LIF IA +L LEQRCARF AYWIHRVGGSS GIF+ILLLL FVL CKASLMFW+S
Subjt:  MGLIFTIAAMLQLEQRCARFGAYWIHRVGGSSSGIFVILLLLVFVLNCKASLMFWDS
TrEMBL top hitse value%identityAlignment
A0A0A0L2W6 Uncharacterized protein8.6e-1678.95Show/hide
Query:  MGLIFTIAAMLQLEQRCARFGAYWIHRVGGSSSGIFVILLLLVFVLNCKASLMFWDS
        M LIF IA +L LEQRCARF  YWIHRVGGSS GIF+ILLLL FVL CKASLMFW+S
Subjt:  MGLIFTIAAMLQLEQRCARFGAYWIHRVGGSSSGIFVILLLLVFVLNCKASLMFWDS
A0A1S3BUL9 uncharacterized protein LOC1034937021.1e-1580Show/hide
Query:  LIFTIAAMLQLEQRCARFGAYWIHRVGGSSSGIFVILLLLVFVLNCKASLMFWDS
        LIF IA +L LEQRCARF  YWIHRVGGSS GIF+ILLLL FVL CKASLMFW+S
Subjt:  LIFTIAAMLQLEQRCARFGAYWIHRVGGSSSGIFVILLLLVFVLNCKASLMFWDS
A0A5D3D907 Uncharacterized protein1.1e-1580Show/hide
Query:  LIFTIAAMLQLEQRCARFGAYWIHRVGGSSSGIFVILLLLVFVLNCKASLMFWDS
        LIF IA +L LEQRCARF  YWIHRVGGSS GIF+ILLLL FVL CKASLMFW+S
Subjt:  LIFTIAAMLQLEQRCARFGAYWIHRVGGSSSGIFVILLLLVFVLNCKASLMFWDS
A0A6J1F9J0 uncharacterized protein LOC1114433315.0e-1681.48Show/hide
Query:  LIFTIAAMLQLEQRCARFGAYWIHRVGGSSSGIFVILLLLVFVLNCKASLMFWD
        LIF IA +L LEQRCARF AYWIHRVGGSS GIF++LLLL FVL CKASLMFWD
Subjt:  LIFTIAAMLQLEQRCARFGAYWIHRVGGSSSGIFVILLLLVFVLNCKASLMFWD
A0A6J1ILG7 uncharacterized protein LOC1114772992.3e-1680.36Show/hide
Query:  MGLIFTIAAMLQLEQRCARFGAYWIHRVGGSSSGIFVILLLLVFVLNCKASLMFWD
        M LIF IA +L LEQRCARF AYWIHRVGGSS GIF++LLLL FVL CKASLMFWD
Subjt:  MGLIFTIAAMLQLEQRCARFGAYWIHRVGGSSSGIFVILLLLVFVLNCKASLMFWD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G21910.1 unknown protein6.5e-0857.14Show/hide
Query:  LIFTIAAMLQLEQRCARFGAYWIHRVGGSSSGIFVILLLLVFVLNCKAS
        LI  IA  L  +    RF  YWIHR+ GS  G+ VIL+LLVFVL CKAS
Subjt:  LIFTIAAMLQLEQRCARFGAYWIHRVGGSSSGIFVILLLLVFVLNCKAS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTGATCTTTACAATTGCTGCAATGCTTCAGTTGGAACAGAGATGTGCTAGGTTTGGTGCTTATTGGATTCATAGAGTTGGTGGCTCTTCTAGTGGCATTTTCGT
CATTCTTCTGCTTCTTGTATTTGTTTTGAACTGTAAAGCTTCTTTAATGTTTTGGGACTCAACTTCTTTGTGTTTGCTCGCTTTTATCATAAATTATTGTATGGAAGATG
TGAGTGTCTAA
mRNA sequenceShow/hide mRNA sequence
GGAGGGCCTGGTGCGTGTTATCTGAAGGGAACACGCTTTTTTTTATCACTGTCGTATGATCCTCGTTTCGCTCGCTGGCCTATTAGGTAGGGTAGTGATCTTCGGGCTTT
GCCTGCCCTTTCTCTACTCTCCCCTACTCTCCCTATTGGTTGATTCCTTCTACACCTTCTACCTCAATATATGACAAGAAAGAATATTAAATAATTCTCAGCTAACTGAC
CTGCCTCCACGTTCTCAAGTAGAGCATTGTTGCTGCCATCTCTTTCTTTTAAGATATTCTATTTCAAGTTTACCGCGAAAGAAGGTCGGAGGGCTCGTAAGGTCGGATGC
CTCCTATTGATCCTCCTTCTTATAGAAATGCATAAATTGGTTCTAGCACATCCTCTATTACCCCACCGCGATTAAGTAGGATTTAGACGAAAGCTAGGGCTAGGTTTTCG
GGGAGACAGTTGGAAAGGCTGAGATGATTGGCTTTGATTCATCAGTTTTAGGGTGCAGGTTTTGTTGCCTCGTGGCCAACTTAAAGGGGCGTAAGTTTGACGCGGAGCTT
TTTGGTTGTTAAGTTATAGCAACATTGAGCTGATCCTGTTCCATTGTAACAATACAACACACCAGAAGAGAATGGAGGTTAGGAGCAGGTTTTGTTCCTACGACCAGTTG
GTGGCGTAGGGCTCGGGCTTCTGGCGGTGGTTTCGCCACTGTATATTGACCGGAGACCGAACATAGAAGCCGAGGAGGATGAGGAATCGTCCATCATTCTTGGCTTGTGG
TTGCCTGTTCTTCTCATGGGGTTGATCTTTACAATTGCTGCAATGCTTCAGTTGGAACAGAGATGTGCTAGGTTTGGTGCTTATTGGATTCATAGAGTTGGTGGCTCTTC
TAGTGGCATTTTCGTCATTCTTCTGCTTCTTGTATTTGTTTTGAACTGTAAAGCTTCTTTAATGTTTTGGGACTCAACTTCTTTGTGTTTGCTCGCTTTTATCATAAATT
ATTGTATGGAAGATGTGAGTGTCTAATTCAATTTACCGATATCTAATATTCTCGTGAAACAACGCTCTCACCCTACTACATTTATTTGTATTTCAAAGTTGCTCTTCAAA
GCTAACAAGACTGATATAATGTATAGACCGATAATCAAAGAGTTATCGGTTAAAATCTCTGTACCCCAATGTTGTTTGACTTCTAAAGGGAAAATTATCTTTTCTATTCC
TAGATTTACGGTGAAGTTTCTATGTGGTCTATTTGTTTCAAATTTAAACACTTTTAC
Protein sequenceShow/hide protein sequence
MGLIFTIAAMLQLEQRCARFGAYWIHRVGGSSSGIFVILLLLVFVLNCKASLMFWDSTSLCLLAFIINYCMEDVSV