; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0007072 (gene) of Chayote v1 genome

Gene IDSed0007072
OrganismSechium edule (Chayote v1)
Descriptionglucuronoxylan 4-O-methyltransferase 1
Genome locationLG06:19367605..19368362
RNA-Seq ExpressionSed0007072
SyntenySed0007072
Gene Ontology termsGO:0045492 - xylan biosynthetic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
InterPro domainsIPR006514 - IRX15/IRX15L/IGXM
IPR021148 - Polysaccharide biosynthesis domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584154.1 Protein IRREGULAR XYLEM 15, partial [Cucurbita argyrosperma subsp. sororia]9.3e-6154.58Show/hide
Query:  MNFTRNKIIPVLILVLSTLSILRLFRIALTTS--SPFSDLLGFP------SGFAKNH------EPTISEKELKLLSDLIAKKAPCKLL------------
        M+ TRNKI+PVL+L+LS+L I RL RIALTTS  SP   +   P      SGF++NH      E TISEKE KLLS+LIAKK PC LL            
Subjt:  MNFTRNKIIPVLILVLSTLSILRLFRIALTTS--SPFSDLLGFP------SGFAKNH------EPTISEKELKLLSDLIAKKAPCKLL------------

Query:  ------------DDPYKMSTFKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVYEVKWDVVV-------------
                    DDPYK+S FK+NSN TRMYKVDYKLH E+AYKLLKH+RG+KSCAPNS L  SS CQL+LTDLPREVYEVKWDVVV             
Subjt:  ------------DDPYKMSTFKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVYEVKWDVVV-------------

Query:  ----LYTISI------------------------GEFLCDENLISSKGKLWIFRIRNEINSTRFCSDKNIVIQ
            +Y+ +I                         EFLCDENLISSKGKLWIFRIRNE NSTRFC DK+I+IQ
Subjt:  ----LYTISI------------------------GEFLCDENLISSKGKLWIFRIRNEINSTRFCSDKNIVIQ

XP_008446235.1 PREDICTED: protein IRX15-LIKE [Cucumis melo]8.1e-5752.4Show/hide
Query:  MNFTRNKIIPVLILVLSTLSILRLFRIALTTSSPFSDLLGF---------PSGFAKNH------EPTISEKELKLLSDLIAKKAPCKLL-----------
        M+FTRNK++PVL+L+LS+LSILRL RIALTTS+  S LL            SGF++ H      E  IS KE KLLS+LIA+K PC LL           
Subjt:  MNFTRNKIIPVLILVLSTLSILRLFRIALTTSSPFSDLLGF---------PSGFAKNH------EPTISEKELKLLSDLIAKKAPCKLL-----------

Query:  -------------DDPYKMSTFKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVYEVKWDVVV------------
                     DDPYK+STFK+NSN TRMYKVDYK H E+AYKLLKH+RG+KSCAP+S L  SS C+L+LTDLPREVYEVKWDVVV            
Subjt:  -------------DDPYKMSTFKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVYEVKWDVVV------------

Query:  -----LYTISI------------------------GEFLCDENLISSKGKLWIFRIRNEINSTRFCSDKNI
             +Y+ +I                         EFLCDENLISSKGKLWIFRIRNE NST FC DK I
Subjt:  -----LYTISI------------------------GEFLCDENLISSKGKLWIFRIRNEINSTRFCSDKNI

XP_022137311.1 glucuronoxylan 4-O-methyltransferase 1 [Momordica charantia]9.6e-5854.21Show/hide
Query:  MNFTRNKIIPVLILVLSTLSILRLFRIALTTSSPFSDL-LGFPS-------GFAKN------HEPTISEKELKLLSDLIAKKAPCKLL------------
        MNFTR KIIPVL+LVLS+LSILRL RIALTTSS  S L +  P        GF+ N      +E  ISEKE KLLS+LIAKKAPC LL            
Subjt:  MNFTRNKIIPVLILVLSTLSILRLFRIALTTSSPFSDL-LGFPS-------GFAKN------HEPTISEKELKLLSDLIAKKAPCKLL------------

Query:  ------------DDPYKMSTFKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVYEVKWDVVV-------------
                    DDPYK+STFKI+SN TR+YKVDYK   E+AYKLLKH+R +K+CAPNS L   S CQL+LTDLPREVYEVKWDVVV             
Subjt:  ------------DDPYKMSTFKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVYEVKWDVVV-------------

Query:  ----LYTISI------------------------GEFLCDENLISSKGKLWIFRIRNEINSTRFCSDKNIVIQ
            +Y+ +I                         EFLCDENLISS+GKLWIFRIRNEINSTRFC DK I+IQ
Subjt:  ----LYTISI------------------------GEFLCDENLISSKGKLWIFRIRNEINSTRFCSDKNIVIQ

XP_023000903.1 glucuronoxylan 4-O-methyltransferase 1 [Cucurbita maxima]2.4e-6154.95Show/hide
Query:  MNFTRNKIIPVLILVLSTLSILRLFRIALTTS--SPFSDLLGFP------SGFAKNH------EPTISEKELKLLSDLIAKKAPCKLL------------
        M+ TRNKI+PVL+L+LS+LSI RL RIALTTS  SP   +   P      SGF++NH      E TISEKE KLLS+LIAKK PC LL            
Subjt:  MNFTRNKIIPVLILVLSTLSILRLFRIALTTS--SPFSDLLGFP------SGFAKNH------EPTISEKELKLLSDLIAKKAPCKLL------------

Query:  ------------DDPYKMSTFKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVYEVKWDVVV-------------
                    DDPYK+S FK+NSN TRMYKVDYKLH E+AYKLLKH+RG+KSCAPNS L  SS CQL+LTDLPREVYEVKWDVVV             
Subjt:  ------------DDPYKMSTFKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVYEVKWDVVV-------------

Query:  ----LYTISI------------------------GEFLCDENLISSKGKLWIFRIRNEINSTRFCSDKNIVIQ
            +Y+ +I                         EFLCDENLISSKGKLWIFRIRNE NSTRFC DK+I+IQ
Subjt:  ----LYTISI------------------------GEFLCDENLISSKGKLWIFRIRNEINSTRFCSDKNIVIQ

XP_038895890.1 glucuronoxylan 4-O-methyltransferase 1 [Benincasa hispida]1.6e-5751.84Show/hide
Query:  MNFTRNKIIPVLILVLSTLSILRLFRIALTTS--SPFSDLLGFP------SGFAKNH-----EPTISEKELKLLSDLIAKKAPCKLL-------------
        M+FTRNKI+PVL+L+LS+LSILRL RIALTTS  SP   +   P      SGF++NH     E  ISE E KLLS+LI +KAPC LL             
Subjt:  MNFTRNKIIPVLILVLSTLSILRLFRIALTTS--SPFSDLLGFP------SGFAKNH-----EPTISEKELKLLSDLIAKKAPCKLL-------------

Query:  -----------DDPYKMSTFKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVYEVKWDVVV--------------
                   DDPYK+STF+++SN TRMYK+DYK H E+AYKLLK +RG+KSCAP+S L  SS C+L+LTDLP+EVYEVKWDVVV              
Subjt:  -----------DDPYKMSTFKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVYEVKWDVVV--------------

Query:  ---LYTISI------------------------GEFLCDENLISSKGKLWIFRIRNEINSTRFCSDKNIVIQ
           +Y+ +I                         EFLCDENLISSKGKLWIFRIRNE NS+RFC DK IV+Q
Subjt:  ---LYTISI------------------------GEFLCDENLISSKGKLWIFRIRNEINSTRFCSDKNIVIQ

TrEMBL top hitse value%identityAlignment
A0A1S3BF86 protein IRX15-LIKE3.9e-5752.4Show/hide
Query:  MNFTRNKIIPVLILVLSTLSILRLFRIALTTSSPFSDLLGF---------PSGFAKNH------EPTISEKELKLLSDLIAKKAPCKLL-----------
        M+FTRNK++PVL+L+LS+LSILRL RIALTTS+  S LL            SGF++ H      E  IS KE KLLS+LIA+K PC LL           
Subjt:  MNFTRNKIIPVLILVLSTLSILRLFRIALTTSSPFSDLLGF---------PSGFAKNH------EPTISEKELKLLSDLIAKKAPCKLL-----------

Query:  -------------DDPYKMSTFKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVYEVKWDVVV------------
                     DDPYK+STFK+NSN TRMYKVDYK H E+AYKLLKH+RG+KSCAP+S L  SS C+L+LTDLPREVYEVKWDVVV            
Subjt:  -------------DDPYKMSTFKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVYEVKWDVVV------------

Query:  -----LYTISI------------------------GEFLCDENLISSKGKLWIFRIRNEINSTRFCSDKNI
             +Y+ +I                         EFLCDENLISSKGKLWIFRIRNE NST FC DK I
Subjt:  -----LYTISI------------------------GEFLCDENLISSKGKLWIFRIRNEINSTRFCSDKNI

A0A5A7UNX6 Protein IRX15-LIKE3.9e-5752.4Show/hide
Query:  MNFTRNKIIPVLILVLSTLSILRLFRIALTTSSPFSDLLGF---------PSGFAKNH------EPTISEKELKLLSDLIAKKAPCKLL-----------
        M+FTRNK++PVL+L+LS+LSILRL RIALTTS+  S LL            SGF++ H      E  IS KE KLLS+LIA+K PC LL           
Subjt:  MNFTRNKIIPVLILVLSTLSILRLFRIALTTSSPFSDLLGF---------PSGFAKNH------EPTISEKELKLLSDLIAKKAPCKLL-----------

Query:  -------------DDPYKMSTFKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVYEVKWDVVV------------
                     DDPYK+STFK+NSN TRMYKVDYK H E+AYKLLKH+RG+KSCAP+S L  SS C+L+LTDLPREVYEVKWDVVV            
Subjt:  -------------DDPYKMSTFKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVYEVKWDVVV------------

Query:  -----LYTISI------------------------GEFLCDENLISSKGKLWIFRIRNEINSTRFCSDKNI
             +Y+ +I                         EFLCDENLISSKGKLWIFRIRNE NST FC DK I
Subjt:  -----LYTISI------------------------GEFLCDENLISSKGKLWIFRIRNEINSTRFCSDKNI

A0A5D3BHK3 Protein IRX15-LIKE3.9e-5752.4Show/hide
Query:  MNFTRNKIIPVLILVLSTLSILRLFRIALTTSSPFSDLLGF---------PSGFAKNH------EPTISEKELKLLSDLIAKKAPCKLL-----------
        M+FTRNK++PVL+L+LS+LSILRL RIALTTS+  S LL            SGF++ H      E  IS KE KLLS+LIA+K PC LL           
Subjt:  MNFTRNKIIPVLILVLSTLSILRLFRIALTTSSPFSDLLGF---------PSGFAKNH------EPTISEKELKLLSDLIAKKAPCKLL-----------

Query:  -------------DDPYKMSTFKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVYEVKWDVVV------------
                     DDPYK+STFK+NSN TRMYKVDYK H E+AYKLLKH+RG+KSCAP+S L  SS C+L+LTDLPREVYEVKWDVVV            
Subjt:  -------------DDPYKMSTFKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVYEVKWDVVV------------

Query:  -----LYTISI------------------------GEFLCDENLISSKGKLWIFRIRNEINSTRFCSDKNI
             +Y+ +I                         EFLCDENLISSKGKLWIFRIRNE NST FC DK I
Subjt:  -----LYTISI------------------------GEFLCDENLISSKGKLWIFRIRNEINSTRFCSDKNI

A0A6J1C675 glucuronoxylan 4-O-methyltransferase 14.6e-5854.21Show/hide
Query:  MNFTRNKIIPVLILVLSTLSILRLFRIALTTSSPFSDL-LGFPS-------GFAKN------HEPTISEKELKLLSDLIAKKAPCKLL------------
        MNFTR KIIPVL+LVLS+LSILRL RIALTTSS  S L +  P        GF+ N      +E  ISEKE KLLS+LIAKKAPC LL            
Subjt:  MNFTRNKIIPVLILVLSTLSILRLFRIALTTSSPFSDL-LGFPS-------GFAKN------HEPTISEKELKLLSDLIAKKAPCKLL------------

Query:  ------------DDPYKMSTFKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVYEVKWDVVV-------------
                    DDPYK+STFKI+SN TR+YKVDYK   E+AYKLLKH+R +K+CAPNS L   S CQL+LTDLPREVYEVKWDVVV             
Subjt:  ------------DDPYKMSTFKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVYEVKWDVVV-------------

Query:  ----LYTISI------------------------GEFLCDENLISSKGKLWIFRIRNEINSTRFCSDKNIVIQ
            +Y+ +I                         EFLCDENLISS+GKLWIFRIRNEINSTRFC DK I+IQ
Subjt:  ----LYTISI------------------------GEFLCDENLISSKGKLWIFRIRNEINSTRFCSDKNIVIQ

A0A6J1KL98 glucuronoxylan 4-O-methyltransferase 11.2e-6154.95Show/hide
Query:  MNFTRNKIIPVLILVLSTLSILRLFRIALTTS--SPFSDLLGFP------SGFAKNH------EPTISEKELKLLSDLIAKKAPCKLL------------
        M+ TRNKI+PVL+L+LS+LSI RL RIALTTS  SP   +   P      SGF++NH      E TISEKE KLLS+LIAKK PC LL            
Subjt:  MNFTRNKIIPVLILVLSTLSILRLFRIALTTS--SPFSDLLGFP------SGFAKNH------EPTISEKELKLLSDLIAKKAPCKLL------------

Query:  ------------DDPYKMSTFKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVYEVKWDVVV-------------
                    DDPYK+S FK+NSN TRMYKVDYKLH E+AYKLLKH+RG+KSCAPNS L  SS CQL+LTDLPREVYEVKWDVVV             
Subjt:  ------------DDPYKMSTFKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVYEVKWDVVV-------------

Query:  ----LYTISI------------------------GEFLCDENLISSKGKLWIFRIRNEINSTRFCSDKNIVIQ
            +Y+ +I                         EFLCDENLISSKGKLWIFRIRNE NSTRFC DK+I+IQ
Subjt:  ----LYTISI------------------------GEFLCDENLISSKGKLWIFRIRNEINSTRFCSDKNIVIQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67330.1 Protein of unknown function (DUF579)8.2e-0724.24Show/hide
Query:  LLDDPYKMSTFKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSR--LGKSSNCQLSLTDLPREVYEVKWDVVV-----------------LYTI
        L +DP  +     ++   R + V Y+ H  EA +LL   + +  C P     +  +  C L+LT LP E Y+ +WD+++                 +++ 
Subjt:  LLDDPYKMSTFKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSR--LGKSSNCQLSLTDLPREVYEVKWDVVV-----------------LYTI

Query:  SI---------------------------GEFLCDENLISSKGKLWIFRIRNEINST-----RFC
        +I                            EFLC++  ++S G+LW F I N  N T     RFC
Subjt:  SI---------------------------GEFLCDENLISSKGKLWIFRIRNEINST-----RFC

AT2G15440.1 Protein of unknown function (DUF579)8.2e-0734.21Show/hide
Query:  DDPYKMSTFKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVYEVKWDVVVL
        + PY +S F+ ++     Y+V Y     +A KLL + +    C P   L   S+C+L + DLP  VYE+ WDV+++
Subjt:  DDPYKMSTFKINSNRTRMYKVDYKLHGEEAYKLLKHSRGDKSCAPNSRLGKSSNCQLSLTDLPREVYEVKWDVVVL

AT4G24910.1 Protein of unknown function (DUF579)9.0e-3033.09Show/hide
Query:  FTRNKIIPVLILVLSTLSILRLFRIALTTSSPFSDLLG-----FPSGFAK----NHEPT-ISEKELKLLSDLIAKKAPCKLL------------------
        FT  K+IP+LI VLS+LS+LRL RI+  +SS             P+  ++    N  PT + EKELKLLSD + +++PC +L                  
Subjt:  FTRNKIIPVLILVLSTLSILRLFRIALTTSSPFSDLLG-----FPSGFAK----NHEPT-ISEKELKLLSDLIAKKAPCKLL------------------

Query:  ------DDPYKMSTFK--INSNRTRMYKVDY-KLHGEEAYKLLKHSRGDKSCAP--NSRLGKSSNCQLSLTDLPREVYEVKWDVVV--------------
              D+P K+   K  +N N TR+Y + Y ++    AY LL+H+R + +CAP  N++   SS+C+L L DLP++V+  KWDV+V              
Subjt:  ------DDPYKMSTFK--INSNRTRMYKVDY-KLHGEEAYKLLKHSRGDKSCAP--NSRLGKSSNCQLSLTDLPREVYEVKWDVVV--------------

Query:  ---LYTISI---------------------------GEFLCDENLISSKGKLWIFRIRNEINSTRFCSDKNIVIQ
           +YT ++                            EFLC ENL+S+KG  W FRI+ + N++RFCS + ++I+
Subjt:  ---LYTISI---------------------------GEFLCDENLISSKGKLWIFRIRNEINSTRFCSDKNIVIQ

AT5G67210.1 Protein of unknown function (DUF579)8.5e-0422.71Show/hide
Query:  ISEKELKLLSDLIAK-KAPCKLL------------------------DDPYKMSTFKINSNRTRMYKVDYKLHGEEAYKLLK--HSRGDKSCAPNSRLGK
        +S  E+K +SD++ +   PC LL                        ++ Y  + F+       ++ V Y     EA +L+          C P   L  
Subjt:  ISEKELKLLSDLIAK-KAPCKLL------------------------DDPYKMSTFKINSNRTRMYKVDYKLHGEEAYKLLK--HSRGDKSCAPNSRLGK

Query:  SSNCQLSLTDLPREVYEVKWDVVV-----------------LYTISI----------------------------GEFLCDENLISSKGKLWIFRI-RNE
         S+C+L L DLP  VY+V WDV++                 ++T ++                             EFLC ENL+ S   L  + + + +
Subjt:  SSNCQLSLTDLPREVYEVKWDVVV-----------------LYTISI----------------------------GEFLCDENLISSKGKLWIFRI-RNE

Query:  INSTRFC
         NST+FC
Subjt:  INSTRFC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTTTACAAGAAACAAAATCATACCTGTTCTCATATTGGTTCTGTCCACTCTCTCCATTCTCAGACTTTTTAGGATTGCACTTACAACATCTTCTCCATTCTCAGA
CTTGTTAGGATTCCCATCCGGGTTCGCAAAAAATCACGAACCCACCATTTCAGAGAAGGAACTCAAGCTTCTTTCAGATCTGATTGCCAAAAAAGCACCTTGCAAGCTCC
TTGATGATCCCTACAAAATGAGCACATTCAAAATCAATTCGAATCGCACGCGAATGTACAAAGTTGATTACAAGCTTCATGGAGAAGAAGCTTACAAGTTGTTAAAGCAT
TCAAGAGGAGACAAATCATGTGCACCAAACTCAAGGCTTGGGAAATCATCAAACTGCCAACTTTCCTTGACAGATCTTCCAAGAGAAGTTTATGAAGTAAAATGGGATGT
TGTGGTTTTGTACACGATATCGATCGGGGAGTTCCTTTGTGATGAAAACTTGATTTCCTCAAAAGGGAAACTCTGGATTTTCAGGATTAGAAATGAGATCAATTCTACTA
GATTCTGCTCTGATAAAAACATTGTGATCCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACTTTACAAGAAACAAAATCATACCTGTTCTCATATTGGTTCTGTCCACTCTCTCCATTCTCAGACTTTTTAGGATTGCACTTACAACATCTTCTCCATTCTCAGA
CTTGTTAGGATTCCCATCCGGGTTCGCAAAAAATCACGAACCCACCATTTCAGAGAAGGAACTCAAGCTTCTTTCAGATCTGATTGCCAAAAAAGCACCTTGCAAGCTCC
TTGATGATCCCTACAAAATGAGCACATTCAAAATCAATTCGAATCGCACGCGAATGTACAAAGTTGATTACAAGCTTCATGGAGAAGAAGCTTACAAGTTGTTAAAGCAT
TCAAGAGGAGACAAATCATGTGCACCAAACTCAAGGCTTGGGAAATCATCAAACTGCCAACTTTCCTTGACAGATCTTCCAAGAGAAGTTTATGAAGTAAAATGGGATGT
TGTGGTTTTGTACACGATATCGATCGGGGAGTTCCTTTGTGATGAAAACTTGATTTCCTCAAAAGGGAAACTCTGGATTTTCAGGATTAGAAATGAGATCAATTCTACTA
GATTCTGCTCTGATAAAAACATTGTGATCCAGTAA
Protein sequenceShow/hide protein sequence
MNFTRNKIIPVLILVLSTLSILRLFRIALTTSSPFSDLLGFPSGFAKNHEPTISEKELKLLSDLIAKKAPCKLLDDPYKMSTFKINSNRTRMYKVDYKLHGEEAYKLLKH
SRGDKSCAPNSRLGKSSNCQLSLTDLPREVYEVKWDVVVLYTISIGEFLCDENLISSKGKLWIFRIRNEINSTRFCSDKNIVIQ