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Sed0007086 (gene) of Chayote v1 genome

Gene IDSed0007086
OrganismSechium edule (Chayote v1)
Descriptionlate embryogenesis abundant protein At5g17165-like
Genome locationLG07:9123022..9128663
RNA-Seq ExpressionSed0007086
SyntenySed0007086
Gene Ontology termsNA
InterPro domainsIPR039291 - Late embryogenesis abundant protein At5g17165-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600216.1 Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. sororia]9.4e-4677.95Show/hide
Query:  MAANSRSVRAIAGLRKRIANQIWTGDSAISSSALNFRRAAHTSVYDKNPDEHVRPSFALDDVIPPQAVADKYWAPHPHTGVFGPVASHPAAAAGNSAVAG
        MAANSRS  AIAGL KRI NQIWT DSAISSSAL FRRAAHTS YDKNPDE VRPS   DDVI PQA A+KYWAPHPHTGVFGP A    AAAG+ A  G
Subjt:  MAANSRSVRAIAGLRKRIANQIWTGDSAISSSALNFRRAAHTSVYDKNPDEHVRPSFALDDVIPPQAVADKYWAPHPHTGVFGPVASHPAAAAGNSAVAG

Query:  GNHGAVDEERAWFRPTSLEDSEKAHGF
        GNH A +EE+AWFRPTSLEDSEK HGF
Subjt:  GNHGAVDEERAWFRPTSLEDSEKAHGF

XP_022941802.1 late embryogenesis abundant protein At5g17165-like isoform X1 [Cucurbita moschata]5.0e-4778.74Show/hide
Query:  MAANSRSVRAIAGLRKRIANQIWTGDSAISSSALNFRRAAHTSVYDKNPDEHVRPSFALDDVIPPQAVADKYWAPHPHTGVFGPVASHPAAAAGNSAVAG
        MAANSRS  AIAGL KRI NQIWT DSAISSSAL FRRAAHTS YDKNPDE VRPS   DDVI PQA A+KYWAPHPHTGVFGP A  P AAAG+ A  G
Subjt:  MAANSRSVRAIAGLRKRIANQIWTGDSAISSSALNFRRAAHTSVYDKNPDEHVRPSFALDDVIPPQAVADKYWAPHPHTGVFGPVASHPAAAAGNSAVAG

Query:  GNHGAVDEERAWFRPTSLEDSEKAHGF
        GNH A +EE+AWFRPTSLEDSEK HGF
Subjt:  GNHGAVDEERAWFRPTSLEDSEKAHGF

XP_022941803.1 late embryogenesis abundant protein At5g17165-like isoform X2 [Cucurbita moschata]4.7e-4577.95Show/hide
Query:  MAANSRSVRAIAGLRKRIANQIWTGDSAISSSALNFRRAAHTSVYDKNPDEHVRPSFALDDVIPPQAVADKYWAPHPHTGVFGPVASHPAAAAGNSAVAG
        MAANSRS  AIAGL KRI NQIWT DSAISSSAL F RAAHTS YDKNPDE VRPS   DDVI PQA A+KYWAPHPHTGVFGP A  P AAAG+ A  G
Subjt:  MAANSRSVRAIAGLRKRIANQIWTGDSAISSSALNFRRAAHTSVYDKNPDEHVRPSFALDDVIPPQAVADKYWAPHPHTGVFGPVASHPAAAAGNSAVAG

Query:  GNHGAVDEERAWFRPTSLEDSEKAHGF
        GNH A +EE+AWFRPTSLEDSEK HGF
Subjt:  GNHGAVDEERAWFRPTSLEDSEKAHGF

XP_022990289.1 late embryogenesis abundant protein At5g17165-like isoform X1 [Cucurbita maxima]1.0e-4477.17Show/hide
Query:  MAANSRSVRAIAGLRKRIANQIWTGDSAISSSALNFRRAAHTSVYDKNPDEHVRPSFALDDVIPPQAVADKYWAPHPHTGVFGPVASHPAAAAGNSAVAG
        MAANSRS  AIAGL KRI NQI T DSAISSSAL FRRAAHTS YDKNPDE VRPS   DDVI PQA A+KYWAPHPHTGVFGP A  P AA    A  G
Subjt:  MAANSRSVRAIAGLRKRIANQIWTGDSAISSSALNFRRAAHTSVYDKNPDEHVRPSFALDDVIPPQAVADKYWAPHPHTGVFGPVASHPAAAAGNSAVAG

Query:  GNHGAVDEERAWFRPTSLEDSEKAHGF
        GNH AV+EE+AWFRPTSLEDSEK HGF
Subjt:  GNHGAVDEERAWFRPTSLEDSEKAHGF

XP_023512363.1 late embryogenesis abundant protein At5g17165-like [Cucurbita pepo subsp. pepo]4.0e-4476.38Show/hide
Query:  MAANSRSVRAIAGLRKRIANQIWTGDSAISSSALNFRRAAHTSVYDKNPDEHVRPSFALDDVIPPQAVADKYWAPHPHTGVFGPVASHPAAAAGNSAVAG
        MAANSRS  AIAGL KRI NQIWT DSAISSSAL F RAAHTS YDKNPDE VRPS   DDVI PQ VA+KYWAPHPHTGVFGP    P A AG+ A  G
Subjt:  MAANSRSVRAIAGLRKRIANQIWTGDSAISSSALNFRRAAHTSVYDKNPDEHVRPSFALDDVIPPQAVADKYWAPHPHTGVFGPVASHPAAAAGNSAVAG

Query:  GNHGAVDEERAWFRPTSLEDSEKAHGF
        GNH A +EE+AWFRPTSLEDSEK HGF
Subjt:  GNHGAVDEERAWFRPTSLEDSEKAHGF

TrEMBL top hitse value%identityAlignment
A0A6J1FNH5 late embryogenesis abundant protein At5g17165-like isoform X12.4e-4778.74Show/hide
Query:  MAANSRSVRAIAGLRKRIANQIWTGDSAISSSALNFRRAAHTSVYDKNPDEHVRPSFALDDVIPPQAVADKYWAPHPHTGVFGPVASHPAAAAGNSAVAG
        MAANSRS  AIAGL KRI NQIWT DSAISSSAL FRRAAHTS YDKNPDE VRPS   DDVI PQA A+KYWAPHPHTGVFGP A  P AAAG+ A  G
Subjt:  MAANSRSVRAIAGLRKRIANQIWTGDSAISSSALNFRRAAHTSVYDKNPDEHVRPSFALDDVIPPQAVADKYWAPHPHTGVFGPVASHPAAAAGNSAVAG

Query:  GNHGAVDEERAWFRPTSLEDSEKAHGF
        GNH A +EE+AWFRPTSLEDSEK HGF
Subjt:  GNHGAVDEERAWFRPTSLEDSEKAHGF

A0A6J1FT47 late embryogenesis abundant protein At5g17165-like isoform X22.3e-4577.95Show/hide
Query:  MAANSRSVRAIAGLRKRIANQIWTGDSAISSSALNFRRAAHTSVYDKNPDEHVRPSFALDDVIPPQAVADKYWAPHPHTGVFGPVASHPAAAAGNSAVAG
        MAANSRS  AIAGL KRI NQIWT DSAISSSAL F RAAHTS YDKNPDE VRPS   DDVI PQA A+KYWAPHPHTGVFGP A  P AAAG+ A  G
Subjt:  MAANSRSVRAIAGLRKRIANQIWTGDSAISSSALNFRRAAHTSVYDKNPDEHVRPSFALDDVIPPQAVADKYWAPHPHTGVFGPVASHPAAAAGNSAVAG

Query:  GNHGAVDEERAWFRPTSLEDSEKAHGF
        GNH A +EE+AWFRPTSLEDSEK HGF
Subjt:  GNHGAVDEERAWFRPTSLEDSEKAHGF

A0A6J1JAZ8 late embryogenesis abundant protein At5g17165-like2.9e-4070.23Show/hide
Query:  MAANSRSVRAIAGLRKRIANQIWTGD----SAISSSALNFRRAAHTSVYDKNPDEHVRPSFALDDVIPPQAVADKYWAPHPHTGVFGPVASHPAAAAGNS
        MAANSRS  AIAGLRKRI +QIWT D    SAISS+A  FRRAAHTS YDKN DE VRPS   DDVI PQ+ ADKYWAPHP TGVFGP   +P AA  N 
Subjt:  MAANSRSVRAIAGLRKRIANQIWTGD----SAISSSALNFRRAAHTSVYDKNPDEHVRPSFALDDVIPPQAVADKYWAPHPHTGVFGPVASHPAAAAGNS

Query:  AVAGGNHGAVDEERAWFRPTSLEDSEKAHGF
           GGN+  V+EE+AWFRPTSLEDSEK HGF
Subjt:  AVAGGNHGAVDEERAWFRPTSLEDSEKAHGF

A0A6J1JRN3 late embryogenesis abundant protein At5g17165-like isoform X15.0e-4577.17Show/hide
Query:  MAANSRSVRAIAGLRKRIANQIWTGDSAISSSALNFRRAAHTSVYDKNPDEHVRPSFALDDVIPPQAVADKYWAPHPHTGVFGPVASHPAAAAGNSAVAG
        MAANSRS  AIAGL KRI NQI T DSAISSSAL FRRAAHTS YDKNPDE VRPS   DDVI PQA A+KYWAPHPHTGVFGP A  P AA    A  G
Subjt:  MAANSRSVRAIAGLRKRIANQIWTGDSAISSSALNFRRAAHTSVYDKNPDEHVRPSFALDDVIPPQAVADKYWAPHPHTGVFGPVASHPAAAAGNSAVAG

Query:  GNHGAVDEERAWFRPTSLEDSEKAHGF
        GNH AV+EE+AWFRPTSLEDSEK HGF
Subjt:  GNHGAVDEERAWFRPTSLEDSEKAHGF

A0A6J1JSV5 late embryogenesis abundant protein At5g17165-like isoform X24.7e-4376.38Show/hide
Query:  MAANSRSVRAIAGLRKRIANQIWTGDSAISSSALNFRRAAHTSVYDKNPDEHVRPSFALDDVIPPQAVADKYWAPHPHTGVFGPVASHPAAAAGNSAVAG
        MAANSRS  AIAGL KRI NQI T DSAISSSAL F RAAHTS YDKNPDE VRPS   DDVI PQA A+KYWAPHPHTGVFGP A  P AA    A  G
Subjt:  MAANSRSVRAIAGLRKRIANQIWTGDSAISSSALNFRRAAHTSVYDKNPDEHVRPSFALDDVIPPQAVADKYWAPHPHTGVFGPVASHPAAAAGNSAVAG

Query:  GNHGAVDEERAWFRPTSLEDSEKAHGF
        GNH AV+EE+AWFRPTSLEDSEK HGF
Subjt:  GNHGAVDEERAWFRPTSLEDSEKAHGF

SwissProt top hitse value%identityAlignment
F4KFM8 Late embryogenesis abundant protein At5g171651.5e-1743.2Show/hide
Query:  MAANSRSVRAIAGLRKRIANQIWTGDSAISSSALNFRRAAHTSVYDKNPDEHVRPSFALDDVIPPQAVADKYWAPHPHTGVFGPVASHPAAAAGNSAVAG
        MAA S++++ +    + I N +    S   +  L   R  HTS YDKN +E ++PS   D++I P   +DKYW+PHP TGVFGP +S   A        G
Subjt:  MAANSRSVRAIAGLRKRIANQIWTGDSAISSSALNFRRAAHTSVYDKNPDEHVRPSFALDDVIPPQAVADKYWAPHPHTGVFGPVASHPAAAAGNSAVAG

Query:  GNHGAVDEERAWFRPTSLEDSEKAH
        G   +V EE+AWFRPTSLED +K H
Subjt:  GNHGAVDEERAWFRPTSLEDSEKAH

Arabidopsis top hitse value%identityAlignment
AT3G03150.1 unknown protein9.5e-2046.34Show/hide
Query:  SRSVRAIAGLRKRIANQIWTGDSAISSSALNFRRAAHTSVYDKNPDEHVRPSFALDDVIPPQAVADKYWAPHPHTGVFGPVASHPAAAAGNSAVAGGNH-
        S+S + I  LRK + N       A +S+    RR+ H+S YDKN ++ +  S   D+VI P   +DKYW+PHP TGVFGP      +   +SA A G H 
Subjt:  SRSVRAIAGLRKRIANQIWTGDSAISSSALNFRRAAHTSVYDKNPDEHVRPSFALDDVIPPQAVADKYWAPHPHTGVFGPVASHPAAAAGNSAVAGGNH-

Query:  -GAVDEERAWFRPTSLEDSEKAH
          AV EE AWFRPTSLEDS+K H
Subjt:  -GAVDEERAWFRPTSLEDSEKAH

AT5G17165.1 unknown protein1.0e-1843.2Show/hide
Query:  MAANSRSVRAIAGLRKRIANQIWTGDSAISSSALNFRRAAHTSVYDKNPDEHVRPSFALDDVIPPQAVADKYWAPHPHTGVFGPVASHPAAAAGNSAVAG
        MAA S++++ +    + I N +    S   +  L   R  HTS YDKN +E ++PS   D++I P   +DKYW+PHP TGVFGP +S   A        G
Subjt:  MAANSRSVRAIAGLRKRIANQIWTGDSAISSSALNFRRAAHTSVYDKNPDEHVRPSFALDDVIPPQAVADKYWAPHPHTGVFGPVASHPAAAAGNSAVAG

Query:  GNHGAVDEERAWFRPTSLEDSEKAH
        G   +V EE+AWFRPTSLED +K H
Subjt:  GNHGAVDEERAWFRPTSLEDSEKAH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCTAATTCGAGGAGCGTAAGAGCGATCGCCGGCTTGAGGAAACGAATTGCTAACCAGATCTGGACCGGCGATTCTGCGATCTCCTCCTCTGCTTTGAACTTCAG
GAGGGCAGCTCACACCTCAGTTTACGACAAGAACCCCGATGAGCATGTCCGACCAAGCTTTGCCCTTGATGATGTGATTCCCCCTCAAGCTGTTGCTGATAAATACTGGG
CTCCTCATCCACACACCGGTGTGTTTGGGCCAGTTGCCAGCCACCCTGCAGCAGCAGCAGGTAACAGTGCTGTTGCTGGGGGCAACCACGGTGCTGTGGACGAGGAAAGG
GCTTGGTTTCGACCGACGAGTCTCGAGGATTCCGAGAAGGCCCATGGGTTCTAG
mRNA sequenceShow/hide mRNA sequence
CGCCGTTTTGACGCAATATAAAACGAGGATTTACCACAGGCGATTAGAATCAAGTAATCAAAAGCAAATTCATTATCAAGATAATCAAAGGCGTTTTTTCTGGTTCTTCG
TTTTCTTTCTTTTTCTCTAAGCTTGAATTGTATGGCCGCTAATTCGAGGAGCGTAAGAGCGATCGCCGGCTTGAGGAAACGAATTGCTAACCAGATCTGGACCGGCGATT
CTGCGATCTCCTCCTCTGCTTTGAACTTCAGGAGGGCAGCTCACACCTCAGTTTACGACAAGAACCCCGATGAGCATGTCCGACCAAGCTTTGCCCTTGATGATGTGATT
CCCCCTCAAGCTGTTGCTGATAAATACTGGGCTCCTCATCCACACACCGGTGTGTTTGGGCCAGTTGCCAGCCACCCTGCAGCAGCAGCAGGTAACAGTGCTGTTGCTGG
GGGCAACCACGGTGCTGTGGACGAGGAAAGGGCTTGGTTTCGACCGACGAGTCTCGAGGATTCCGAGAAGGCCCATGGGTTCTAGGCTTTTATAATATAAGGCTCATGCA
TGGTTGTGGTTTGTGGCTAAAAAGGAACTAAATAAAGATGGTTGTTTTTATGGTTGTACTAAAGACGATATGGCTAAGGATGCTTTGTGTTGGACATTTTGTTGTTCTCA
TTCGACTATACAAAATATTGTGGTATTATTTTATAACTCTATTTATCCATACAACCCGGAAAAGAAGTGTTACCTCAAGGCTTATTTTCAAGCCGTTAAGAAGAATGTTT
CTAAAAATTATTTTGCA
Protein sequenceShow/hide protein sequence
MAANSRSVRAIAGLRKRIANQIWTGDSAISSSALNFRRAAHTSVYDKNPDEHVRPSFALDDVIPPQAVADKYWAPHPHTGVFGPVASHPAAAAGNSAVAGGNHGAVDEER
AWFRPTSLEDSEKAHGF