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Sed0007102 (gene) of Chayote v1 genome

Gene IDSed0007102
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG12:31469408..31469902
RNA-Seq ExpressionSed0007102
SyntenySed0007102
Gene Ontology termsGO:0010112 - regulation of systemic acquired resistance (biological process)
InterPro domainsIPR034577 - Protein NIM1-INTERACTING 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058070.1 hypothetical protein E6C27_scaffold274G003770 [Cucumis melo var. makuwa]2.6e-1654.62Show/hide
Query:  MRKEKRKGLPEDGGGICEKKAKKDKTT----AEEPTDAEVEEFYVILRRMKQAAEYFGVKKGMLTRKYIRAAVATAAIQNEKEEEEEEEEEETAVVVKID
        M KEKRK   E    I EKK + D +T    AEEPTD EVEEFY+ILRRMKQ AEYFGV++GMLT K + A VA AA Q EK+EEE+          + +
Subjt:  MRKEKRKGLPEDGGGICEKKAKKDKTT----AEEPTDAEVEEFYVILRRMKQAAEYFGVKKGMLTRKYIRAAVATAAIQNEKEEEEEEEEEETAVVVKID

Query:  EAA---PAVVKKNGLR-LDLNIAAAVESDG
        +       VV++NGLR LDLNIA AV+SDG
Subjt:  EAA---PAVVKKNGLR-LDLNIAAAVESDG
KAE8652459.1 hypothetical protein Csa_013196 [Cucumis sativus]1.6e-1856.82Show/hide
Query:  MRKEKRKGLPEDGGGICEKKAKKDKT---TAEEPTDAEVEEFYVILRRMKQAAEYFGVKKGMLTRKYIRAAVATAAIQNEKEEEEEEEEEETAVV-----
        M KEKRK   E+   I EKK K D T    AEEPTD EVEEFY+ILRRMKQ AEYFGV++GML  K + A VA AA Q EK+EEEEEE++  ++      
Subjt:  MRKEKRKGLPEDGGGICEKKAKKDKT---TAEEPTDAEVEEFYVILRRMKQAAEYFGVKKGMLTRKYIRAAVATAAIQNEKEEEEEEEEEETAVV-----

Query:  -VKIDEAAPAVVKKNGLRLDLNIAAAV-ESDG
         V        VV++NGLRLDLNIA AV +SDG
Subjt:  -VKIDEAAPAVVKKNGLRLDLNIAAAV-ESDG
KAG6589551.1 hypothetical protein SDJN03_14974, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2059.23Show/hide
Query:  MRKEKRKGLPEDGGGICEKKAKKDKTTA---EEPTDAEVEEFYVILRRMKQAAEYFGVKKGMLTRKYIRAAVATAAIQNEKEEEE---EEEEEETAVV-V
        M + KRK   E+ G  CEKK K D+TTA   +EPTD EVEEFY ILRRMK+AAEYFGV+KGMLT K +R   A AA + EKEEE+   +  E ET V  +
Subjt:  MRKEKRKGLPEDGGGICEKKAKKDKTTA---EEPTDAEVEEFYVILRRMKQAAEYFGVKKGMLTRKYIRAAVATAAIQNEKEEEE---EEEEEETAVV-V

Query:  KIDEAAPAVVKKNGLRLDLNIAAAVESDGR
        K       VV +NGLRLDLNIA AVESDGR
Subjt:  KIDEAAPAVVKKNGLRLDLNIAAAVESDGR
TYK28420.1 hypothetical protein E5676_scaffold629G00500 [Cucumis melo var. makuwa]2.6e-1654.62Show/hide
Query:  MRKEKRKGLPEDGGGICEKKAKKDKTT----AEEPTDAEVEEFYVILRRMKQAAEYFGVKKGMLTRKYIRAAVATAAIQNEKEEEEEEEEEETAVVVKID
        M KEKRK   E    I EKK + D +T    AEEPTD EVEEFY+ILRRMKQ AEYFGV++GMLT K + A VA AA Q EK+EEE+          + +
Subjt:  MRKEKRKGLPEDGGGICEKKAKKDKTT----AEEPTDAEVEEFYVILRRMKQAAEYFGVKKGMLTRKYIRAAVATAAIQNEKEEEEEEEEEETAVVVKID

Query:  EAA---PAVVKKNGLR-LDLNIAAAVESDG
        +       VV++NGLR LDLNIA AV+SDG
Subjt:  EAA---PAVVKKNGLR-LDLNIAAAVESDG
TrEMBL top hitse value%identityAlignment
A0A5A7USD1 Uncharacterized protein1.3e-1654.62Show/hide
Query:  MRKEKRKGLPEDGGGICEKKAKKDKTT----AEEPTDAEVEEFYVILRRMKQAAEYFGVKKGMLTRKYIRAAVATAAIQNEKEEEEEEEEEETAVVVKID
        M KEKRK   E    I EKK + D +T    AEEPTD EVEEFY+ILRRMKQ AEYFGV++GMLT K + A VA AA Q EK+EEE+          + +
Subjt:  MRKEKRKGLPEDGGGICEKKAKKDKTT----AEEPTDAEVEEFYVILRRMKQAAEYFGVKKGMLTRKYIRAAVATAAIQNEKEEEEEEEEEETAVVVKID

Query:  EAA---PAVVKKNGLR-LDLNIAAAVESDG
        +       VV++NGLR LDLNIA AV+SDG
Subjt:  EAA---PAVVKKNGLR-LDLNIAAAVESDG
A0A5D3DYW7 Uncharacterized protein1.3e-1654.62Show/hide
Query:  MRKEKRKGLPEDGGGICEKKAKKDKTT----AEEPTDAEVEEFYVILRRMKQAAEYFGVKKGMLTRKYIRAAVATAAIQNEKEEEEEEEEEETAVVVKID
        M KEKRK   E    I EKK + D +T    AEEPTD EVEEFY+ILRRMKQ AEYFGV++GMLT K + A VA AA Q EK+EEE+          + +
Subjt:  MRKEKRKGLPEDGGGICEKKAKKDKTT----AEEPTDAEVEEFYVILRRMKQAAEYFGVKKGMLTRKYIRAAVATAAIQNEKEEEEEEEEEETAVVVKID

Query:  EAA---PAVVKKNGLR-LDLNIAAAVESDG
        +       VV++NGLR LDLNIA AV+SDG
Subjt:  EAA---PAVVKKNGLR-LDLNIAAAVESDG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAAAGAAAAGAGAAAGGGGCTGCCGGAGGACGGCGGCGGAATTTGTGAAAAGAAGGCTAAAAAGGATAAGACGACGGCGGAGGAGCCGACCGACGCGGAGGTGGA
GGAGTTCTACGTCATACTCCGGCGGATGAAGCAAGCGGCGGAGTATTTTGGCGTGAAAAAGGGGATGCTAACGAGGAAATACATAAGAGCGGCGGTTGCCACGGCGGCGA
TACAAAATGAGAAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGACGGCGGTGGTGGTGAAGATCGATGAGGCGGCGCCGGCGGTGGTGAAGAAAAATGGGTTGCGGTTG
GATTTGAATATTGCGGCGGCGGTGGAGAGCGATGGCCGGTGA
mRNA sequenceShow/hide mRNA sequence
TTTTCATTTCTCTTTACCAACTTTATATTCCCCATTAATAATTCCCATCTCCCTTCGATTATGAAATTTTCTTATTTCTTTTTCTTATCTTGAAATCTTTTTGCACATAG
TAAAATATTTAAAATGAGAAAAGAAAAGAGAAAGGGGCTGCCGGAGGACGGCGGCGGAATTTGTGAAAAGAAGGCTAAAAAGGATAAGACGACGGCGGAGGAGCCGACCG
ACGCGGAGGTGGAGGAGTTCTACGTCATACTCCGGCGGATGAAGCAAGCGGCGGAGTATTTTGGCGTGAAAAAGGGGATGCTAACGAGGAAATACATAAGAGCGGCGGTT
GCCACGGCGGCGATACAAAATGAGAAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGACGGCGGTGGTGGTGAAGATCGATGAGGCGGCGCCGGCGGTGGTGAAGAAAAA
TGGGTTGCGGTTGGATTTGAATATTGCGGCGGCGGTGGAGAGCGATGGCCGGTGA
Protein sequenceShow/hide protein sequence
MRKEKRKGLPEDGGGICEKKAKKDKTTAEEPTDAEVEEFYVILRRMKQAAEYFGVKKGMLTRKYIRAAVATAAIQNEKEEEEEEEEEETAVVVKIDEAAPAVVKKNGLRL
DLNIAAAVESDGR