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Sed0007104 (gene) of Chayote v1 genome

Gene IDSed0007104
OrganismSechium edule (Chayote v1)
DescriptionDYW_deaminase domain-containing protein
Genome locationLG06:3637908..3638568
RNA-Seq ExpressionSed0007104
SyntenySed0007104
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8021266.1 hypothetical protein FH972_007173 [Carpinus fangiana]7.1e-0742.99Show/hide
Query:  VASDTAAVLALSLVVFFALSRAPGS-AGVQLSPTPAVSSHRTSQNMSSFFPSPVDEWSSPISAAPQ-----SPVPVSGEFVGRSGFSSVKLSYGISAFGL
        +A+ T    ALS+ +FFA+     S     +S +PAV+ + TS NMSSFFPSP D+   P SAAP      +PVP SGEFVG+S  +SV+   GI+  G+
Subjt:  VASDTAAVLALSLVVFFALSRAPGS-AGVQLSPTPAVSSHRTSQNMSSFFPSPVDEWSSPISAAPQ-----SPVPVSGEFVGRSGFSSVKLSYGISAFGL

Query:  SICTFLV
         + + L+
Subjt:  SICTFLV

KAF3966928.1 hypothetical protein CMV_009015 [Castanea mollissima]2.4e-0745.28Show/hide
Query:  VASDTAAVLALSLVVFFALSRAPGSAG-VQLSPTPAVSSHRTSQNMSSFFPSPVDEWSSPISAAPQS----PVPVSGEFVGRSGFSSVKLSYGISAFGLS
        +A+ T +  ALS+V+ FA+  AP S     +S +PAVS H T  NMSSFF SP  +     +AAP S    P+P SGEFVGRS  +S +L  GI+ FG+ 
Subjt:  VASDTAAVLALSLVVFFALSRAPGSAG-VQLSPTPAVSSHRTSQNMSSFFPSPVDEWSSPISAAPQS----PVPVSGEFVGRSGFSSVKLSYGISAFGLS

Query:  -ICTFL
         +C F+
Subjt:  -ICTFL

XP_015570786.1 uncharacterized protein LOC107260786 [Ricinus communis]4.2e-0750.6Show/hide
Query:  AAVLALSLVVFFALSRAPGSAGVQLSPTPAVSSHRTSQNMSSFFPSPVDEW-SSPISAAPQSPVPVSGEFVGRSGFSSVKLSY
        +A  ALS  +FF+   A  S  V  S +P VS + T+ NMSSFFPSP +EW + P  A   +P+P SGEF+G+S  SSVKLSY
Subjt:  AAVLALSLVVFFALSRAPGSAGVQLSPTPAVSSHRTSQNMSSFFPSPVDEW-SSPISAAPQSPVPVSGEFVGRSGFSSVKLSY

XP_022934640.1 uncharacterized protein LOC111441775 [Cucurbita moschata]5.4e-1564.13Show/hide
Query:  LALSLVVFFALSRAPGSAGVQLSPTPAVSSHRTSQNMSSFFPSPVDEWSSPISAAPQSPVPV-SGEFVG-RSGFSSVKLSYGISAFGLSICT
        +ALSL  FFA+S A  SA   +S +P V  HR SQNMSSFFPSPVD  SSPISAAP     + SGEF+G RSG +SVKL++GISAFGLSIC+
Subjt:  LALSLVVFFALSRAPGSAGVQLSPTPAVSSHRTSQNMSSFFPSPVDEWSSPISAAPQSPVPV-SGEFVG-RSGFSSVKLSYGISAFGLSICT

XP_022983589.1 uncharacterized protein LOC111482150 [Cucurbita maxima]7.9e-1459.8Show/hide
Query:  AAVVASDTAAVLALSLVVFFALSRAPGSAGVQLSPTPAVSSHRTSQNMSSFFPSPVDEWSSPISAAPQSPVPVSGEFVG-RSGFSSVKLSYGISAFGLSI
        AA  A+ +   +ALSL   FALS +  SA   +S +P V  HR SQNMSSFFPSPVD  SSPISAAP      SGEF+G RSG +SVKL++GISAFGLSI
Subjt:  AAVVASDTAAVLALSLVVFFALSRAPGSAGVQLSPTPAVSSHRTSQNMSSFFPSPVDEWSSPISAAPQSPVPVSGEFVG-RSGFSSVKLSYGISAFGLSI

Query:  CT
        C+
Subjt:  CT

TrEMBL top hitse value%identityAlignment
A0A2N9I0C8 Uncharacterized protein7.7e-0744.34Show/hide
Query:  VASDTAAVLALSLVVFFALSRAPGSAG-VQLSPTPAVSSHRTSQNMSSFFPSPVDEWSSPISAAPQS----PVPVSGEFVGRSGFSSVKLSYGISAFGLS
        +A+ T +  ALS+V+ FA+  AP S     +S +PAVS + T+ NMSSFF SP  +     +AAP S    PVP SGEFVGRS  +S +   GI+ FG+ 
Subjt:  VASDTAAVLALSLVVFFALSRAPGSAG-VQLSPTPAVSSHRTSQNMSSFFPSPVDEWSSPISAAPQS----PVPVSGEFVGRSGFSSVKLSYGISAFGLS

Query:  -ICTFL
         +C F+
Subjt:  -ICTFL

A0A5N6QUU6 Uncharacterized protein3.4e-0742.99Show/hide
Query:  VASDTAAVLALSLVVFFALSRAPGS-AGVQLSPTPAVSSHRTSQNMSSFFPSPVDEWSSPISAAPQ-----SPVPVSGEFVGRSGFSSVKLSYGISAFGL
        +A+ T    ALS+ +FFA+     S     +S +PAV+ + TS NMSSFFPSP D+   P SAAP      +PVP SGEFVG+S  +SV+   GI+  G+
Subjt:  VASDTAAVLALSLVVFFALSRAPGS-AGVQLSPTPAVSSHRTSQNMSSFFPSPVDEWSSPISAAPQ-----SPVPVSGEFVGRSGFSSVKLSYGISAFGL

Query:  SICTFLV
         + + L+
Subjt:  SICTFLV

A0A6J1F8A3 uncharacterized protein LOC1114417752.6e-1564.13Show/hide
Query:  LALSLVVFFALSRAPGSAGVQLSPTPAVSSHRTSQNMSSFFPSPVDEWSSPISAAPQSPVPV-SGEFVG-RSGFSSVKLSYGISAFGLSICT
        +ALSL  FFA+S A  SA   +S +P V  HR SQNMSSFFPSPVD  SSPISAAP     + SGEF+G RSG +SVKL++GISAFGLSIC+
Subjt:  LALSLVVFFALSRAPGSAGVQLSPTPAVSSHRTSQNMSSFFPSPVDEWSSPISAAPQSPVPV-SGEFVG-RSGFSSVKLSYGISAFGLSICT

A0A6J1J7U9 uncharacterized protein LOC1114821503.8e-1459.8Show/hide
Query:  AAVVASDTAAVLALSLVVFFALSRAPGSAGVQLSPTPAVSSHRTSQNMSSFFPSPVDEWSSPISAAPQSPVPVSGEFVG-RSGFSSVKLSYGISAFGLSI
        AA  A+ +   +ALSL   FALS +  SA   +S +P V  HR SQNMSSFFPSPVD  SSPISAAP      SGEF+G RSG +SVKL++GISAFGLSI
Subjt:  AAVVASDTAAVLALSLVVFFALSRAPGSAGVQLSPTPAVSSHRTSQNMSSFFPSPVDEWSSPISAAPQSPVPVSGEFVG-RSGFSSVKLSYGISAFGLSI

Query:  CT
        C+
Subjt:  CT

A0A7N2KYA4 Uncharacterized protein2.2e-0643.4Show/hide
Query:  VASDTAAVLALSLVVFFALSRAPGSAG-VQLSPTPAVSSHRTSQNMSSFFPSPVDEWSSPISAAPQS----PVPVSGEFVGRSGFSSVKLSYGISAFGLS
        +A+ T +  AL +V+ FA+  AP S     +S +P+VS + T  NMSSFF SP  +     +AAP S    PVP SGEFVGRS  +S +L  GI+ FG+ 
Subjt:  VASDTAAVLALSLVVFFALSRAPGSAG-VQLSPTPAVSSHRTSQNMSSFFPSPVDEWSSPISAAPQS----PVPVSGEFVGRSGFSSVKLSYGISAFGLS

Query:  -ICTFL
         +C F+
Subjt:  -ICTFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCGGTTGTTGCCAGTGACACGGCCGCGGTTCTTGCTTTGTCTCTAGTTGTCTTCTTTGCCTTATCTCGAGCACCCGGCTCTGCCGGAGTTCAGCTTTCTCCAAC
CCCAGCTGTTTCATCTCACAGAACTTCACAAAATATGTCTTCCTTTTTCCCTTCTCCAGTTGATGAATGGTCTTCTCCCATTTCTGCAGCGCCACAGTCGCCGGTGCCGG
TCTCGGGCGAGTTCGTGGGGAGGAGTGGGTTCAGCTCTGTGAAGCTCAGTTATGGCATTTCAGCTTTTGGTCTGAGCATTTGTACTTTTTTAGTTTAA
mRNA sequenceShow/hide mRNA sequence
AAACGATGTCTGTAATTTCATGTGGATAACATAATGCTGCCATTCCCGTGATGTTTCCAATCACCATTCCAACAGTCACCCACTCCAAAAAAAAAAAAAACTTGCTCTTT
TAACTTGTTTATCCTCTGCATTTTAGGATATAATCTGTTTCTCTTCTTCATTGGGTTGCTAAAGCTTTCCTTACAGAGCTCTCTCTGACATCAATGGCTGCGGTTGTTGC
CAGTGACACGGCCGCGGTTCTTGCTTTGTCTCTAGTTGTCTTCTTTGCCTTATCTCGAGCACCCGGCTCTGCCGGAGTTCAGCTTTCTCCAACCCCAGCTGTTTCATCTC
ACAGAACTTCACAAAATATGTCTTCCTTTTTCCCTTCTCCAGTTGATGAATGGTCTTCTCCCATTTCTGCAGCGCCACAGTCGCCGGTGCCGGTCTCGGGCGAGTTCGTG
GGGAGGAGTGGGTTCAGCTCTGTGAAGCTCAGTTATGGCATTTCAGCTTTTGGTCTGAGCATTTGTACTTTTTTAGTTTAAGAATGTTTCTTGGTGTTTGATTGGTTTAC
AGTGATGCTTTAGCCTTTTCTTGTACTTTGGATTGAGGATTTCATGTGTTTGATTTCTGTGAACTGAGATTTCTTCTCTTGGTTGAAATAAATGGTGATTTCCATTTGAA
A
Protein sequenceShow/hide protein sequence
MAAVVASDTAAVLALSLVVFFALSRAPGSAGVQLSPTPAVSSHRTSQNMSSFFPSPVDEWSSPISAAPQSPVPVSGEFVGRSGFSSVKLSYGISAFGLSICTFLV