; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0007114 (gene) of Chayote v1 genome

Gene IDSed0007114
OrganismSechium edule (Chayote v1)
DescriptionPMD domain-containing protein
Genome locationLG08:19827658..19829621
RNA-Seq ExpressionSed0007114
SyntenySed0007114
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025724.1 uncharacterized protein E6C27_scaffold653G00030 [Cucumis melo var. makuwa]3.2e-2131.98Show/hide
Query:  LGGIPVPCASEITHCCAETNLLNVNKETALVLWEKIHQRIVDTPFEKISRATKYADTIFQGISNICATNLPFLRKFVGDYFQKVEEFNKLQSLHSSQLTS
        +GG       EI+H C +  + ++ ++TA+ L E + Q+I+ TPFE++S        IF  I+   + NL FL++ V  YFQ VE  N+++   SS L  
Subjt:  LGGIPVPCASEITHCCAETNLLNVNKETALVLWEKIHQRIVDTPFEKISRATKYADTIFQGISNICATNLPFLRKFVGDYFQKVEEFNKLQSLHSSQLTS

Query:  TSKTCRLEEAKVTLDNLLSNQNSTIAEMDVFIQQHQRSLREGERLEAQLKALKTKQEEISESIVEKETYLAQLKRDECAACEAITDVESSVAISDEDACN
        ++K  +L E K  +  L  ++N  + E     ++  R   +  +LEA+LK ++T+  ++S  I + E  L Q +R+    CE I  ++ ++ I D DA  
Subjt:  TSKTCRLEEAKVTLDNLLSNQNSTIAEMDVFIQQHQRSLREGERLEAQLKALKTKQEEISESIVEKETYLAQLKRDECAACEAITDVESSVAISDEDACN

Query:  LEILRGMLRDALQELQDFKWVP
        L  LR  L + L+EL++ KW P
Subjt:  LEILRGMLRDALQELQDFKWVP

KAA0060431.1 hypothetical protein E6C27_scaffold22G002540 [Cucumis melo var. makuwa]4.0e-1627.2Show/hide
Query:  LREMSQLRKTIPLKEPALHLGGIPVPCASEITHCCAETNLLNVNKETALVLWEKIHQRIVDTPFEKISRATKYADTIFQGISNICATNLPFLRKFVGDYF
        L+++S     +   E  L      +  + E +    E  +LN  K+TAL +WE I  +I+ TPFE I R      T+  GI  I    L  L +++  Y 
Subjt:  LREMSQLRKTIPLKEPALHLGGIPVPCASEITHCCAETNLLNVNKETALVLWEKIHQRIVDTPFEKISRATKYADTIFQGISNICATNLPFLRKFVGDYF

Query:  QKVEEFNKLQSLHSSQLTSTSKTCRLEEAKVTLDNLLSNQNSTIAEMDVFIQQHQRSLREGERLEAQLKALKTKQEEISESIVEKETYLAQLKRDECAAC
        ++V+ FN +QS +S+QL ST K  +L+E    ++  L+       + +V  ++  +   E + LE +L++L  + E++S    EK   + Q + +     
Subjt:  QKVEEFNKLQSLHSSQLTSTSKTCRLEEAKVTLDNLLSNQNSTIAEMDVFIQQHQRSLREGERLEAQLKALKTKQEEISESIVEKETYLAQLKRDECAAC

Query:  EAITDVESSVAISDEDACNLEILRGMLRDALQELQDFKW
        + +  +E + AI++E    L ++R  +  A +E ++FKW
Subjt:  EAITDVESSVAISDEDACNLEILRGMLRDALQELQDFKW

OMO88400.1 hypothetical protein COLO4_20277 [Corchorus olitorius]2.0e-1526.46Show/hide
Query:  HLGGIPVPCASEITHCCAETNLLNVNKETALVLWEKIHQRIVDTPFEKISRATKYADTIFQGISNICATNLPFLRKFVGDYFQKVEEFNKLQSLHSSQLT
        H   +P+  A+E T   A+  +     + AL+LWE +  +I  TPF ++    +    IF  I  I A +   L+  V +YF++V +F  L+S  SS+++
Subjt:  HLGGIPVPCASEITHCCAETNLLNVNKETALVLWEKIHQRIVDTPFEKISRATKYADTIFQGISNICATNLPFLRKFVGDYFQKVEEFNKLQSLHSSQLT

Query:  STSKTCRLEEAKVTLDNLLSNQNSTIAEMDVFIQQHQRSLREGERLEAQLKALKTKQEEISESIVEKETYLAQLKRDECAACEAITDVESSVAISDEDAC
        S  +  +L+  +  L+  +S +N  +        +H +   E  ++E ++ AL+ K+ ++  S+ E E  L  ++ D     E +   ES   +S+ DA 
Subjt:  STSKTCRLEEAKVTLDNLLSNQNSTIAEMDVFIQQHQRSLREGERLEAQLKALKTKQEEISESIVEKETYLAQLKRDECAACEAITDVESSVAISDEDAC

Query:  NLEILRGMLRDALQELQDFKWVP
         L++L  +L+ + ++L++ KW P
Subjt:  NLEILRGMLRDALQELQDFKWVP

TYK06155.1 uncharacterized protein E5676_scaffold287G00030 [Cucumis melo var. makuwa]5.4e-2131.98Show/hide
Query:  LGGIPVPCASEITHCCAETNLLNVNKETALVLWEKIHQRIVDTPFEKISRATKYADTIFQGISNICATNLPFLRKFVGDYFQKVEEFNKLQSLHSSQLTS
        +GG       EI+H C +  + ++ ++TA+ L E + Q+I+ TPFE++S        IF  I+   + NL FL++ V  YFQ VE  N+++   SS L  
Subjt:  LGGIPVPCASEITHCCAETNLLNVNKETALVLWEKIHQRIVDTPFEKISRATKYADTIFQGISNICATNLPFLRKFVGDYFQKVEEFNKLQSLHSSQLTS

Query:  TSKTCRLEEAKVTLDNLLSNQNSTIAEMDVFIQQHQRSLREGERLEAQLKALKTKQEEISESIVEKETYLAQLKRDECAACEAITDVESSVAISDEDACN
        ++K  +L E K  +  L  ++N  + E     ++  R   +  +LEA+LK ++T+  ++S  I + E  L Q +R+    CE I  ++ ++ I D DA  
Subjt:  TSKTCRLEEAKVTLDNLLSNQNSTIAEMDVFIQQHQRSLREGERLEAQLKALKTKQEEISESIVEKETYLAQLKRDECAACEAITDVESSVAISDEDACN

Query:  LEILRGMLRDALQELQDFKWVP
        L  LR  L + L+EL++ KW P
Subjt:  LEILRGMLRDALQELQDFKWVP

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]8.9e-2432.75Show/hide
Query:  LKEPALHLGGIPVPCASEITHCCAETNLLNVNKETALVLWEKIHQRIVDTPFEKISRATKYADTIFQGISNICATNLPFLRKFVGDYFQKVEEFNKLQSL
        +K P   + G      SEI+H CA++ + ++ ++ A+ LWE + Q+I+ TPFE++S        IF  I+   + NL  LR+ V  YFQ VE  N+   +
Subjt:  LKEPALHLGGIPVPCASEITHCCAETNLLNVNKETALVLWEKIHQRIVDTPFEKISRATKYADTIFQGISNICATNLPFLRKFVGDYFQKVEEFNKLQSL

Query:  HSSQLTSTSKTCRLEEAKVTLDNLLSNQNSTIAEMDVFIQQHQRSLREGERLEAQLKALKTKQEEISESIVEKETYLAQLKRDECAACEAITDVESSVAI
        HSS L  ++K  +L EAK  +  L  ++N  +AE +   ++  R   +  +LEA+LK ++ +  ++S  I + +  L Q + +    CE I  +E +  +
Subjt:  HSSQLTSTSKTCRLEEAKVTLDNLLSNQNSTIAEMDVFIQQHQRSLREGERLEAQLKALKTKQEEISESIVEKETYLAQLKRDECAACEAITDVESSVAI

Query:  SDEDACNLEILRGMLRDALQELQDFKWVP
         D DA  L  LR  L   L+EL++FKW P
Subjt:  SDEDACNLEILRGMLRDALQELQDFKWVP

TrEMBL top hitse value%identityAlignment
A0A1R3J0T1 PMD domain-containing protein9.6e-1626.46Show/hide
Query:  HLGGIPVPCASEITHCCAETNLLNVNKETALVLWEKIHQRIVDTPFEKISRATKYADTIFQGISNICATNLPFLRKFVGDYFQKVEEFNKLQSLHSSQLT
        H   +P+  A+E T   A+  +     + AL+LWE +  +I  TPF ++    +    IF  I  I A +   L+  V +YF++V +F  L+S  SS+++
Subjt:  HLGGIPVPCASEITHCCAETNLLNVNKETALVLWEKIHQRIVDTPFEKISRATKYADTIFQGISNICATNLPFLRKFVGDYFQKVEEFNKLQSLHSSQLT

Query:  STSKTCRLEEAKVTLDNLLSNQNSTIAEMDVFIQQHQRSLREGERLEAQLKALKTKQEEISESIVEKETYLAQLKRDECAACEAITDVESSVAISDEDAC
        S  +  +L+  +  L+  +S +N  +        +H +   E  ++E ++ AL+ K+ ++  S+ E E  L  ++ D     E +   ES   +S+ DA 
Subjt:  STSKTCRLEEAKVTLDNLLSNQNSTIAEMDVFIQQHQRSLREGERLEAQLKALKTKQEEISESIVEKETYLAQLKRDECAACEAITDVESSVAISDEDAC

Query:  NLEILRGMLRDALQELQDFKWVP
         L++L  +L+ + ++L++ KW P
Subjt:  NLEILRGMLRDALQELQDFKWVP

A0A1R3JL02 Uncharacterized protein2.8e-1526.46Show/hide
Query:  HLGGIPVPCASEITHCCAETNLLNVNKETALVLWEKIHQRIVDTPFEKISRATKYADTIFQGISNICATNLPFLRKFVGDYFQKVEEFNKLQSLHSSQLT
        H   +P+  A E T   A+  + +   + AL+LWE +  +I  TPF ++    +    IF  I  I A +   L+  V +YF++V +F  L+S  SS+++
Subjt:  HLGGIPVPCASEITHCCAETNLLNVNKETALVLWEKIHQRIVDTPFEKISRATKYADTIFQGISNICATNLPFLRKFVGDYFQKVEEFNKLQSLHSSQLT

Query:  STSKTCRLEEAKVTLDNLLSNQNSTIAEMDVFIQQHQRSLREGERLEAQLKALKTKQEEISESIVEKETYLAQLKRDECAACEAITDVESSVAISDEDAC
        S  +  +L+  K  L+  +  +N  +        +H +   E  ++E ++ AL+ K+ ++  S+ E E  L  ++ D     E +   ES   +S+ DA 
Subjt:  STSKTCRLEEAKVTLDNLLSNQNSTIAEMDVFIQQHQRSLREGERLEAQLKALKTKQEEISESIVEKETYLAQLKRDECAACEAITDVESSVAISDEDAC

Query:  NLEILRGMLRDALQELQDFKWVP
         L++L  +L+ + ++L++ KW P
Subjt:  NLEILRGMLRDALQELQDFKWVP

A0A5A7SJ85 Uncharacterized protein1.5e-2131.98Show/hide
Query:  LGGIPVPCASEITHCCAETNLLNVNKETALVLWEKIHQRIVDTPFEKISRATKYADTIFQGISNICATNLPFLRKFVGDYFQKVEEFNKLQSLHSSQLTS
        +GG       EI+H C +  + ++ ++TA+ L E + Q+I+ TPFE++S        IF  I+   + NL FL++ V  YFQ VE  N+++   SS L  
Subjt:  LGGIPVPCASEITHCCAETNLLNVNKETALVLWEKIHQRIVDTPFEKISRATKYADTIFQGISNICATNLPFLRKFVGDYFQKVEEFNKLQSLHSSQLTS

Query:  TSKTCRLEEAKVTLDNLLSNQNSTIAEMDVFIQQHQRSLREGERLEAQLKALKTKQEEISESIVEKETYLAQLKRDECAACEAITDVESSVAISDEDACN
        ++K  +L E K  +  L  ++N  + E     ++  R   +  +LEA+LK ++T+  ++S  I + E  L Q +R+    CE I  ++ ++ I D DA  
Subjt:  TSKTCRLEEAKVTLDNLLSNQNSTIAEMDVFIQQHQRSLREGERLEAQLKALKTKQEEISESIVEKETYLAQLKRDECAACEAITDVESSVAISDEDACN

Query:  LEILRGMLRDALQELQDFKWVP
        L  LR  L + L+EL++ KW P
Subjt:  LEILRGMLRDALQELQDFKWVP

A0A5A7V3X5 PMD domain-containing protein1.9e-1627.2Show/hide
Query:  LREMSQLRKTIPLKEPALHLGGIPVPCASEITHCCAETNLLNVNKETALVLWEKIHQRIVDTPFEKISRATKYADTIFQGISNICATNLPFLRKFVGDYF
        L+++S     +   E  L      +  + E +    E  +LN  K+TAL +WE I  +I+ TPFE I R      T+  GI  I    L  L +++  Y 
Subjt:  LREMSQLRKTIPLKEPALHLGGIPVPCASEITHCCAETNLLNVNKETALVLWEKIHQRIVDTPFEKISRATKYADTIFQGISNICATNLPFLRKFVGDYF

Query:  QKVEEFNKLQSLHSSQLTSTSKTCRLEEAKVTLDNLLSNQNSTIAEMDVFIQQHQRSLREGERLEAQLKALKTKQEEISESIVEKETYLAQLKRDECAAC
        ++V+ FN +QS +S+QL ST K  +L+E    ++  L+       + +V  ++  +   E + LE +L++L  + E++S    EK   + Q + +     
Subjt:  QKVEEFNKLQSLHSSQLTSTSKTCRLEEAKVTLDNLLSNQNSTIAEMDVFIQQHQRSLREGERLEAQLKALKTKQEEISESIVEKETYLAQLKRDECAAC

Query:  EAITDVESSVAISDEDACNLEILRGMLRDALQELQDFKW
        + +  +E + AI++E    L ++R  +  A +E ++FKW
Subjt:  EAITDVESSVAISDEDACNLEILRGMLRDALQELQDFKW

A0A5D3C453 Uncharacterized protein2.6e-2131.98Show/hide
Query:  LGGIPVPCASEITHCCAETNLLNVNKETALVLWEKIHQRIVDTPFEKISRATKYADTIFQGISNICATNLPFLRKFVGDYFQKVEEFNKLQSLHSSQLTS
        +GG       EI+H C +  + ++ ++TA+ L E + Q+I+ TPFE++S        IF  I+   + NL FL++ V  YFQ VE  N+++   SS L  
Subjt:  LGGIPVPCASEITHCCAETNLLNVNKETALVLWEKIHQRIVDTPFEKISRATKYADTIFQGISNICATNLPFLRKFVGDYFQKVEEFNKLQSLHSSQLTS

Query:  TSKTCRLEEAKVTLDNLLSNQNSTIAEMDVFIQQHQRSLREGERLEAQLKALKTKQEEISESIVEKETYLAQLKRDECAACEAITDVESSVAISDEDACN
        ++K  +L E K  +  L  ++N  + E     ++  R   +  +LEA+LK ++T+  ++S  I + E  L Q +R+    CE I  ++ ++ I D DA  
Subjt:  TSKTCRLEEAKVTLDNLLSNQNSTIAEMDVFIQQHQRSLREGERLEAQLKALKTKQEEISESIVEKETYLAQLKRDECAACEAITDVESSVAISDEDACN

Query:  LEILRGMLRDALQELQDFKWVP
        L  LR  L + L+EL++ KW P
Subjt:  LEILRGMLRDALQELQDFKWVP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATTAAAGGAGACACCACAGTTGAGAGAGATGTCGCAGTTGAGGAAGACAATACCATTGAAAGAACCTGCTTTGCACTTGGGTGGTATACCAGTTCCTTGTGCTAG
TGAGATCACTCATTGTTGTGCAGAGACTAACTTGTTGAATGTAAACAAGGAAACTGCTTTGGTTTTGTGGGAGAAAATACACCAAAGGATTGTAGATACTCCGTTTGAAA
AGATTTCACGTGCTACAAAGTACGCAGACACGATTTTTCAAGGCATCTCAAATATTTGTGCAACTAACCTCCCGTTCCTACGAAAATTTGTTGGAGATTACTTTCAAAAG
GTTGAGGAATTCAACAAGCTGCAATCATTACATTCTTCCCAACTCACTTCAACAAGCAAAACTTGTCGGTTGGAAGAGGCCAAGGTTACCTTAGATAACTTGTTAAGTAA
CCAAAATAGCACAATCGCTGAGATGGATGTGTTCATTCAACAACATCAAAGGTCATTACGAGAGGGAGAAAGATTGGAAGCCCAACTTAAAGCTTTGAAGACCAAACAAG
AGGAAATCTCGGAGTCGATTGTTGAGAAAGAGACTTATTTGGCTCAGCTCAAACGGGACGAATGTGCAGCATGCGAAGCTATAACTGATGTCGAAAGTTCTGTTGCCATT
TCTGATGAAGACGCTTGTAACTTGGAGATACTTCGTGGGATGTTGAGAGATGCTCTTCAAGAGTTGCAAGATTTTAAATGGGTTCCATGA
mRNA sequenceShow/hide mRNA sequence
GTTCAATGATGGTTGAATTTTCTGGCGAAAGTGGGGCCAAATATTTTACTGATTTTGTAGCTCGTGTACACATGCATAAGGGTAGAGAGATATCATGGTATGCTAGCCTT
TTAGCTAGAAACAAAGGTGAACGCTTGACAGATGATAAAAGTCTTACTTTTTGGTCCTCATCATTCTTTATAAGTCTTCGCTCATGTTTGTTATCTTCACGAAGTGGATC
GACATTAGTTATTGAAGCTTACAACCCTTGTCGATTTAGCTGACAATTTGGATTCTGTCAAGACATACCTAATGATTTGAGCAAAGTGATTCCTAGGGCTACTTTAAATA
ATGTATTGCGCCTTTGGATGATATGCGTTGAAGTAGAGACATCCTCTCAAGTATATATTCCTGTGCATGCAATGAACTCACATAATCAAGTTACCGAACGTTACCACAAT
TGGTGGTTGGTAAAGAATGAGAGCTATCTTGAGGATAACATACAAAGGTTGGTGGATAGTGTCGCTCCTATTGCTTCTAAACAAAAGTTCCCCAAGGCAGTTGGTGATGA
AAAAGGAGGCAAACAAATTCGCATGTTTGATCCTGCTAATTTTGCCACCACAGAAAATGAGGAGAGCCATAGTAGTCATACAGACCAGAATTGGAAGAGGAAGAAGAAGT
CCCATAAACTTTCAATCTTTGAAGATGACTTTTTTTAGGGGGTCCAAGTGCTTCGCAGTTTCAAGATCTTCCATTAACCTTGTCACCTCGTGATGATTCAATTATGGAAG
CAGTAGAGCAAACCAGTCCAAAATCAGTCGTCAGTCCGGAGTTGTTTCATTCTATGACTGCGCGCGTGGGTCAGGTCAAGGCTCCAATGAATAAAGCTAGATTTCCACCT
TCTGTTCCTACAACTGATAAAGTGATAAAATCATCAAAGGAGAAGACACGGTGTAGGGAGATGCCAATGTTGAAAGATACATCACAGTTGATAAGGGAGAAATGATTGGG
AGAGACACCATAGTTAATAGAGGTGATGCAATTAAAGGAGACACCACAGTTGAGAGAGATGTCGCAGTTGAGGAAGACAATACCATTGAAAGAACCTGCTTTGCACTTGG
GTGGTATACCAGTTCCTTGTGCTAGTGAGATCACTCATTGTTGTGCAGAGACTAACTTGTTGAATGTAAACAAGGAAACTGCTTTGGTTTTGTGGGAGAAAATACACCAA
AGGATTGTAGATACTCCGTTTGAAAAGATTTCACGTGCTACAAAGTACGCAGACACGATTTTTCAAGGCATCTCAAATATTTGTGCAACTAACCTCCCGTTCCTACGAAA
ATTTGTTGGAGATTACTTTCAAAAGGTTGAGGAATTCAACAAGCTGCAATCATTACATTCTTCCCAACTCACTTCAACAAGCAAAACTTGTCGGTTGGAAGAGGCCAAGG
TTACCTTAGATAACTTGTTAAGTAACCAAAATAGCACAATCGCTGAGATGGATGTGTTCATTCAACAACATCAAAGGTCATTACGAGAGGGAGAAAGATTGGAAGCCCAA
CTTAAAGCTTTGAAGACCAAACAAGAGGAAATCTCGGAGTCGATTGTTGAGAAAGAGACTTATTTGGCTCAGCTCAAACGGGACGAATGTGCAGCATGCGAAGCTATAAC
TGATGTCGAAAGTTCTGTTGCCATTTCTGATGAAGACGCTTGTAACTTGGAGATACTTCGTGGGATGTTGAGAGATGCTCTTCAAGAGTTGCAAGATTTTAAATGGGTTC
CATGATCTTTTTTTATTTAGATCTATATTCTTTTAGCACATTTATTTTATCAACGAGAGTTGTTACTCTTATGTTGCTTCAAATTTATCATTCTTCAGACATATATTTCT
ATTTATAATGAAT
Protein sequenceShow/hide protein sequence
MQLKETPQLREMSQLRKTIPLKEPALHLGGIPVPCASEITHCCAETNLLNVNKETALVLWEKIHQRIVDTPFEKISRATKYADTIFQGISNICATNLPFLRKFVGDYFQK
VEEFNKLQSLHSSQLTSTSKTCRLEEAKVTLDNLLSNQNSTIAEMDVFIQQHQRSLREGERLEAQLKALKTKQEEISESIVEKETYLAQLKRDECAACEAITDVESSVAI
SDEDACNLEILRGMLRDALQELQDFKWVP