CuGenDBv2

Gene ID	Sed0007130
Organism	Sechium edule (Chayote v1)
Description	protein E6
Genome location	LG10:1714673..1715757
RNA-Seq Expression	Sed0007130
Synteny	Sed0007130
Gene Ontology terms	NA
InterPro domains	IPR040290 - Protein E6-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0052668.1 protein E6 [Cucumis melo var. makuwa]

4.7e-70

58.67

Show/hide

Query:  ASPAKLTSLLILTFLFIIQIHARES-HFFSKIPNNN--------NGESTRIPT--NIDPLTNTEKT------QDPNFIPQTQDTGYGLYGHESGQLPPFN
        +SP   TS+LILT LF IQIHARES +FFSKIPNNN        + + T+IP   N+DPLTN EKT      Q PNFIPQTQD GYGLYGHESGQLPP +
Subjt:  ASPAKLTSLLILTFLFIIQIHARES-HFFSKIPNNN--------NGESTRIPT--NIDPLTNTEKT------QDPNFIPQTQDTGYGLYGHESGQLPPFN

Query:  EK-------------------YDDEENKYRGNDAVSFKTESEEYYNNGDVNNNNNFQN-SNSYKKPYENSFYYNKDLYDNRRQSFPNARLSRNDYTTT--
        +                    YD+ +NK+R +   ++K+ESEEYYN  D NNNNNFQ   NS  KPYENSFYYNKDLYDN RQSF N RLSR+DYTTT  
Subjt:  EK-------------------YDDEENKYRGNDAVSFKTESEEYYNNGDVNNNNNFQN-SNSYKKPYENSFYYNKDLYDNRRQSFPNARLSRNDYTTT--

Query:  ----SYDN-YNGNSNGRD---NANNVVRQGMSDTRFMGNGKYFYDLDKEPHHYRNSRGNFG----NNNNADDY------GRY--QNDEAEFQDESDQFLP
             YDN YN N+ G D   N NN+VRQGMSDTRFM NGKY+YDLD+EPHHY  SRG FG    NNNN + Y      GRY  QNDEAEFQ+E D+F+P
Subjt:  ----SYDN-YNGNSNGRD---NANNVVRQGMSDTRFMGNGKYFYDLDKEPHHYRNSRGNFG----NNNNADDY------GRY--QNDEAEFQDESDQFLP

KAG6594586.1 Protein E6, partial [Cucurbita argyrosperma subsp. sororia]

2.2e-72

61.54

Show/hide

Query:  MASPAKLTSLLILTFLFIIQIHARESHFFSKIPNNNNGESTRIPTNIDPLTNTEKT-----QDPNFIPQTQDTGYGLYGHESGQLPPFNEK---------
        MAS  KL SL +L+ LF IQIH RES+FFSK+P NNNGES +IP  +DPLTN+EKT     QDPNFIPQTQD GYGLYGHESGQ  P + K         
Subjt:  MASPAKLTSLLILTFLFIIQIHARESHFFSKIPNNNNGESTRIPTNIDPLTNTEKT-----QDPNFIPQTQDTGYGLYGHESGQLPPFNEK---------

Query:  ---------YDDEENKYRGNDAVSFKTESEEYYNNGDVNNNNNFQNSNSYKKPYENSFYYNKDLYDNRRQSFPNARLSRNDY----TTTSYD--NYNGN-
                 YDD EN Y+ ND VS+K+ESEEYYN  +  NN+NFQNSN +KKPYENSFYYNKDLYDNRRQSF N RLSRN+Y    TT SYD   YN + 
Subjt:  ---------YDDEENKYRGNDAVSFKTESEEYYNNGDVNNNNNFQNSNSYKKPYENSFYYNKDLYDNRRQSFPNARLSRNDY----TTTSYD--NYNGN-

Query:  -------SNGRDNANNVVRQGMSDTRFMGNGKYFYDLDKEPHHY-RNSRGNFGNNNNADDY------GRYQNDEAEFQDESDQFLP
               +N  DN NNV RQGMSDTRFM NGKYFYDL++EP H  R+SR NF NNNN + Y      GRYQNDE EFQ+ESD+F+P
Subjt:  -------SNGRDNANNVVRQGMSDTRFMGNGKYFYDLDKEPHHY-RNSRGNFGNNNNADDY------GRYQNDEAEFQDESDQFLP

KAG7026556.1 Protein E6, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.1e-71

61.19

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Query:  MASPAKLTSLLILTFLFIIQIHARESHFFSKIPNNNNGESTRIPTNIDPLTNTEKT-----QDPNFIPQTQDTGYGLYGHESGQLPPFNEK---------
        MAS  KL SL +L+ LF IQIH RES+FFSK+P NNNGES +IP  +DPLT +EKT     QDPNFIPQTQD GYGLYGHESGQ  P + K         
Subjt:  MASPAKLTSLLILTFLFIIQIHARESHFFSKIPNNNNGESTRIPTNIDPLTNTEKT-----QDPNFIPQTQDTGYGLYGHESGQLPPFNEK---------

Query:  ---------YDDEENKYRGNDAVSFKTESEEYYNNGDVNNNNNFQNSNSYKKPYENSFYYNKDLYDNRRQSFPNARLSRNDY----TTTSYD--NYNGN-
                 YDD EN Y+ ND VS+K+ESEEYYN  +  NN+NFQNSN +KKPYENSFYYNKDLYDNRRQSF N RLSRN+Y    TT SYD   YN + 
Subjt:  ---------YDDEENKYRGNDAVSFKTESEEYYNNGDVNNNNNFQNSNSYKKPYENSFYYNKDLYDNRRQSFPNARLSRNDY----TTTSYD--NYNGN-

Query:  -------SNGRDNANNVVRQGMSDTRFMGNGKYFYDLDKEPHHY-RNSRGNFGNNNNADDY------GRYQNDEAEFQDESDQFLP
               +N  DN NNV RQGMSDTRFM NGKYFYDL++EP H  R+SR NF NNNN + Y      GRYQNDE EFQ+ESD+F+P
Subjt:  -------SNGRDNANNVVRQGMSDTRFMGNGKYFYDLDKEPHHY-RNSRGNFGNNNNADDY------GRYQNDEAEFQDESDQFLP

XP_022926835.1 protein E6 [Cucurbita moschata]

1.3e-72

61.67

Show/hide

Query:  MASPAKLTSLLILTFLFIIQIHARESHFFSKIPNNNNGESTRIPTNIDPLTNTEKT-----QDPNFIPQTQDTGYGLYGHESGQLPPFNEK---------
        MAS  KL SL +L+ LF IQIH RES+FFSK+P NNNGES +IP  +DPLTN+EKT     QDPNFIPQTQD GYGLYGHESGQ  P + K         
Subjt:  MASPAKLTSLLILTFLFIIQIHARESHFFSKIPNNNNGESTRIPTNIDPLTNTEKT-----QDPNFIPQTQDTGYGLYGHESGQLPPFNEK---------

Query:  ---------YDDEENKYRGNDAVSFKTESEEYYNNGDVNNNNNFQNSNSYKKPYENSFYYNKDLYDNRRQSFPNARLSRNDYTTT-----SY-------D
                 YDD EN Y+ ND VS+K+ESEEYYN  +  NN+NFQNSN +KKPYENSFYYNKDLYDNRRQSF N RLSRN+Y TT     SY       D
Subjt:  ---------YDDEENKYRGNDAVSFKTESEEYYNNGDVNNNNNFQNSNSYKKPYENSFYYNKDLYDNRRQSFPNARLSRNDYTTT-----SY-------D

Query:  NYNGN---SNGRDNANNVVRQGMSDTRFMGNGKYFYDLDKEPHHY-RNSRGNFGNNNNADDY------GRYQNDEAEFQDESDQFLP
        N N N   +N  DN NNV RQGMSDTRFM NGKYFYDL +EP H  R+SR NF NNNN + Y      GRYQNDE EFQ+ESD+F+P
Subjt:  NYNGN---SNGRDNANNVVRQGMSDTRFMGNGKYFYDLDKEPHHY-RNSRGNFGNNNNADDY------GRYQNDEAEFQDESDQFLP

XP_023517993.1 protein E6-like [Cucurbita pepo subsp. pepo]

1.2e-70

60.92

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Query:  MASPAKLTSLLILTFLFIIQIHARESHFFSKIPNNNNGESTRIPTNIDPLTNTEKT-----QDPNFIPQTQDTGYGLYGHESGQLPPFNEK---------
        MAS  KL SLL+L+ LF IQIH RES+FFSK+P NNNGES +IP  +DPLTN+EKT     QDPNFIPQTQD GYGLYGHES Q    + K         
Subjt:  MASPAKLTSLLILTFLFIIQIHARESHFFSKIPNNNNGESTRIPTNIDPLTNTEKT-----QDPNFIPQTQDTGYGLYGHESGQLPPFNEK---------

Query:  ---------YDDEENKYRGNDAVSFKTESEEYYNNGDVNNNNNFQNSNSYKKPYENSFYYNKDLYDNRRQSFPNARLSRNDYTTT---SYD--NYNGNSN
                 YDD EN Y+ ND VS+K+ESEEYYN  +  NN+NFQNSN +KKPYENSFYYNKDLYDNRRQSF N RLSRN+Y TT   SYD   YN ++N
Subjt:  ---------YDDEENKYRGNDAVSFKTESEEYYNNGDVNNNNNFQNSNSYKKPYENSFYYNKDLYDNRRQSFPNARLSRNDYTTT---SYD--NYNGNSN

Query:  GR-------DNANNVVRQGMSDTRFMGNGKYFYDLDKEPHHY-RNSRGNFGNNNN------ADDYGRYQNDEAEFQDESDQFLP
                 DN NN+ RQGMSDTRFM NGKYFYDL++EP H  R SR NF NNNN       +  GRYQNDE EFQ+ESD+F+P
Subjt:  GR-------DNANNVVRQGMSDTRFMGNGKYFYDLDKEPHHY-RNSRGNFGNNNN------ADDYGRYQNDEAEFQDESDQFLP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KLJ0 Uncharacterized protein

1.6e-68

57.14

Show/hide

Query:  ASPAKLTSLLILTFLFIIQIHARES-HFFSKIPNNN-----NGESTRIPTN--IDPLTNTEKT-------QDPNFIPQTQDTGYGLYGHESGQLPP-FNE
        +SP   TS+LILT LF +QIHARES +FFSKIPNNN     + + T+I  +  +DPLTN EKT       Q PNFIPQTQD GYGLYGHESGQLPP  N 
Subjt:  ASPAKLTSLLILTFLFIIQIHARES-HFFSKIPNNN-----NGESTRIPTN--IDPLTNTEKT-------QDPNFIPQTQDTGYGLYGHESGQLPP-FNE

Query:  KY--------------------DDEENKYRGNDAVSFKTESEEYYNNGDVNNNNNFQN-SNSYKKPYENSFYYNKDLYDNRRQSFPNARLSRNDYTTT--
        K+                    DD+ NK++ +   ++K+ESEEYYN  + NNNNNFQ   NS  KPY+NSFYYNKDLYDN RQSFPNARLSR+DYTTT  
Subjt:  KY--------------------DDEENKYRGNDAVSFKTESEEYYNNGDVNNNNNFQN-SNSYKKPYENSFYYNKDLYDNRRQSFPNARLSRNDYTTT--

Query:  ----SYDNYNGN------SNGRDNANNVVRQGMSDTRFMGNGKYFYDLDKEPHHY-RNSRGNFGNNNN--------ADDYGRY--QNDEAEFQDESDQFL
             YDN+  N      +N  DN NNVVRQGMSDTRFM NGKY+YDL++EPHHY R+SRG FGNNNN         +  GRY  QNDEAEFQ+E D+F+
Subjt:  ----SYDNYNGN------SNGRDNANNVVRQGMSDTRFMGNGKYFYDLDKEPHHY-RNSRGNFGNNNN--------ADDYGRY--QNDEAEFQDESDQFL

Query:  P
        P
Subjt:  P

A0A1S3B2M6 protein E6

3.0e-70

58.47

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Query:  ASPAKLTSLLILTFLFIIQIHARES-HFFSKIPNNN---------NGESTRIPT--NIDPLTNTEKT------QDPNFIPQTQDTGYGLYGHESGQLPPF
        +SP   TS+LILT LF IQIHARES +FFSKIPNNN         + + T+IP   N+DPLTN EKT      Q PNFIPQTQD GYGLYGHESGQLPP 
Subjt:  ASPAKLTSLLILTFLFIIQIHARES-HFFSKIPNNN---------NGESTRIPT--NIDPLTNTEKT------QDPNFIPQTQDTGYGLYGHESGQLPPF

Query:  NEK-------------------YDDEENKYRGNDAVSFKTESEEYYNNGDVNNNNNFQN-SNSYKKPYENSFYYNKDLYDNRRQSFPNARLSRNDYTTT-
        ++                    YD+ +NK+R +   ++K+ESEEYYN  D NNNNNFQ   NS  KPYENSFYYNKDLYDN RQSF N RLSR+DYTTT 
Subjt:  NEK-------------------YDDEENKYRGNDAVSFKTESEEYYNNGDVNNNNNFQN-SNSYKKPYENSFYYNKDLYDNRRQSFPNARLSRNDYTTT-

Query:  -----SYDN-YNGNSNGRD---NANNVVRQGMSDTRFMGNGKYFYDLDKEPHHYRNSRGNFG----NNNNADDY------GRY--QNDEAEFQDESDQFL
              YDN YN N+ G D   N NN+VRQGMSDTRFM NGKY+YDLD+EPHHY  SRG FG    NNNN + Y      GRY  QNDEAEFQ+E D+F+
Subjt:  -----SYDN-YNGNSNGRD---NANNVVRQGMSDTRFMGNGKYFYDLDKEPHHYRNSRGNFG----NNNNADDY------GRY--QNDEAEFQDESDQFL

Query:  P
        P
Subjt:  P

A0A5D3CMI3 Protein E6

2.3e-70

58.67

Show/hide

Query:  ASPAKLTSLLILTFLFIIQIHARES-HFFSKIPNNN--------NGESTRIPT--NIDPLTNTEKT------QDPNFIPQTQDTGYGLYGHESGQLPPFN
        +SP   TS+LILT LF IQIHARES +FFSKIPNNN        + + T+IP   N+DPLTN EKT      Q PNFIPQTQD GYGLYGHESGQLPP +
Subjt:  ASPAKLTSLLILTFLFIIQIHARES-HFFSKIPNNN--------NGESTRIPT--NIDPLTNTEKT------QDPNFIPQTQDTGYGLYGHESGQLPPFN

Query:  EK-------------------YDDEENKYRGNDAVSFKTESEEYYNNGDVNNNNNFQN-SNSYKKPYENSFYYNKDLYDNRRQSFPNARLSRNDYTTT--
        +                    YD+ +NK+R +   ++K+ESEEYYN  D NNNNNFQ   NS  KPYENSFYYNKDLYDN RQSF N RLSR+DYTTT  
Subjt:  EK-------------------YDDEENKYRGNDAVSFKTESEEYYNNGDVNNNNNFQN-SNSYKKPYENSFYYNKDLYDNRRQSFPNARLSRNDYTTT--

Query:  ----SYDN-YNGNSNGRD---NANNVVRQGMSDTRFMGNGKYFYDLDKEPHHYRNSRGNFG----NNNNADDY------GRY--QNDEAEFQDESDQFLP
             YDN YN N+ G D   N NN+VRQGMSDTRFM NGKY+YDLD+EPHHY  SRG FG    NNNN + Y      GRY  QNDEAEFQ+E D+F+P
Subjt:  ----SYDN-YNGNSNGRD---NANNVVRQGMSDTRFMGNGKYFYDLDKEPHHYRNSRGNFG----NNNNADDY------GRY--QNDEAEFQDESDQFLP

A0A6J1EM79 protein E6

6.4e-73

61.67

Show/hide

Query:  MASPAKLTSLLILTFLFIIQIHARESHFFSKIPNNNNGESTRIPTNIDPLTNTEKT-----QDPNFIPQTQDTGYGLYGHESGQLPPFNEK---------
        MAS  KL SL +L+ LF IQIH RES+FFSK+P NNNGES +IP  +DPLTN+EKT     QDPNFIPQTQD GYGLYGHESGQ  P + K         
Subjt:  MASPAKLTSLLILTFLFIIQIHARESHFFSKIPNNNNGESTRIPTNIDPLTNTEKT-----QDPNFIPQTQDTGYGLYGHESGQLPPFNEK---------

Query:  ---------YDDEENKYRGNDAVSFKTESEEYYNNGDVNNNNNFQNSNSYKKPYENSFYYNKDLYDNRRQSFPNARLSRNDYTTT-----SY-------D
                 YDD EN Y+ ND VS+K+ESEEYYN  +  NN+NFQNSN +KKPYENSFYYNKDLYDNRRQSF N RLSRN+Y TT     SY       D
Subjt:  ---------YDDEENKYRGNDAVSFKTESEEYYNNGDVNNNNNFQNSNSYKKPYENSFYYNKDLYDNRRQSFPNARLSRNDYTTT-----SY-------D

Query:  NYNGN---SNGRDNANNVVRQGMSDTRFMGNGKYFYDLDKEPHHY-RNSRGNFGNNNNADDY------GRYQNDEAEFQDESDQFLP
        N N N   +N  DN NNV RQGMSDTRFM NGKYFYDL +EP H  R+SR NF NNNN + Y      GRYQNDE EFQ+ESD+F+P
Subjt:  NYNGN---SNGRDNANNVVRQGMSDTRFMGNGKYFYDLDKEPHHY-RNSRGNFGNNNNADDY------GRYQNDEAEFQDESDQFLP

A0A6J1KXL8 protein E6-like

8.6e-70

59.86

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Query:  MASPAKLTSLLILTFLFIIQIHARESHFFSKIPNNNNGESTRIPTNIDPLTNTEKT-----QDPNFIPQTQDTGYGLYGHESGQLPPFNEK---------
        MAS  KL SL +L+ LF IQIH RES+FFSK+PNNN    T+IP  +DPLTN+EKT     QDPNFIPQTQD GYGLYGHES Q  P + K         
Subjt:  MASPAKLTSLLILTFLFIIQIHARESHFFSKIPNNNNGESTRIPTNIDPLTNTEKT-----QDPNFIPQTQDTGYGLYGHESGQLPPFNEK---------

Query:  ---------YDDEENKYRGNDAVSFKTESEEYYNNGDVNNNNNFQNSNSYKKPYENSFYYNKDLYDNRRQSFPNARLSRNDYTTT----SY--------D
                 YDD EN Y+ ND VS+K+ESEEYYN  +  NN+NFQNSN +KKPYENSFYYNKDLYDNRRQSF N  LSR++YTTT    SY        D
Subjt:  ---------YDDEENKYRGNDAVSFKTESEEYYNNGDVNNNNNFQNSNSYKKPYENSFYYNKDLYDNRRQSFPNARLSRNDYTTT----SY--------D

Query:  NYNGN---SNGRDNANNVVRQGMSDTRFMGNGKYFYDLDKEPHHY-RNSRGNFGNNN----NADDY----GRYQNDEAEFQDESDQFLP
        N N N   +N  DN NNV RQGMSDTRFM NGKYFYDL++EP H  R SR NF NNN    N  +Y    GRYQNDE EFQ+ESD+F+P
Subjt:  NYNGN---SNGRDNANNVVRQGMSDTRFMGNGKYFYDLDKEPHHY-RNSRGNFGNNN----NADDY----GRYQNDEAEFQDESDQFLP

SwissProt top hits

e value

%identity

Alignment

Q01197 Protein E6

1.4e-21

36.54

Show/hide

Query:  MASPAKL--TSLLILTFLFIIQIHARESHFFSKIP--NNNNGEST----RIPTNIDPLTNTEKTQDPNFIPQTQDTGYGLYGHESG-QLPPFNEKYDDEE
        MAS  KL   S+L L  LF +QIHARE  +FSK P  N N  E+T    +  T +   T   + Q+P FIP+TQ+ GYGLYGHESG   P F  K   E 
Subjt:  MASPAKL--TSLLILTFLFIIQIHARESHFFSKIP--NNNNGEST----RIPTNIDPLTNTEKTQDPNFIPQTQDTGYGLYGHESG-QLPPFNEKYDDEE

Query:  NKYRGNDAVSFKTESEEYYNNGDVNNNNNFQNSNSYKKPYENSFYYNKDLYDN-RRQSFPNARLSRNDYTTTSYDNYNGNSNGRDNANNVVRQGMSDTRF
                   +   +E YN+   ++NN            ++++YYNK+ Y++ ++Q+   A  +   ++T    N N   NG +  NN  +QGMSDTR+
Subjt:  NKYRGNDAVSFKTESEEYYNNGDVNNNNNFQNSNSYKKPYENSFYYNKDLYDN-RRQSFPNARLSRNDYTTTSYDNYNGNSNGRDNANNVVRQGMSDTRF

Query:  MGNGKYFYDLDKE----PHHYRNSRG----NFGNNNNADDYGRYQNDEAEFQDESDQFLP
        + NGKY+YD+  E    P+ + NSRG    N  N N  ++ GRY  ++ EF++  ++F P
Subjt:  MGNGKYFYDLDKE----PHHYRNSRG----NFGNNNNADDYGRYQNDEAEFQDESDQFLP

Q54VM3 TBC1 domain family member 5 homolog A

9.4e-05

25.45

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Query:  SKIPNNNNGESTRIPTNIDPLTNTEKTQDPNFIPQTQDTGYG----LYGHESGQLPPFNEKYDDEENKYRGNDAV--SFKTESEEYYNNGDVNNNNNFQN
        + I NNNN  +     N +   N  + QD +F      + YG    ++  ES      N   D   N Y  N+    ++     E YNN + NNNNN  N
Subjt:  SKIPNNNNGESTRIPTNIDPLTNTEKTQDPNFIPQTQDTGYG----LYGHESGQLPPFNEKYDDEENKYRGNDAV--SFKTESEEYYNNGDVNNNNNFQN

Query:  SNSYKKPYENSFYYNKDLYDNRRQSFPNARLSRNDYTTTSYDNYNGNSNGRDNANNVVRQGMSDTRFMGNGKYF---YDLDKEPHHYRNSRGNFGNNNNA
        +N+      N+   N    +N  Q       S N+Y     +N+N N N  +N NN      +   +  N   +   Y      ++Y NS  N  N+N  
Subjt:  SNSYKKPYENSFYYNKDLYDNRRQSFPNARLSRNDYTTTSYDNYNGNSNGRDNANNVVRQGMSDTRFMGNGKYF---YDLDKEPHHYRNSRGNFGNNNNA

Query:  DDYGRYQNDEAEFQDESDQF
        +   +Y  +E + Q + ++F
Subjt:  DDYGRYQNDEAEFQDESDQF

Arabidopsis top hits

e value

%identity

Alignment

AT1G28400.1 unknown protein

4.3e-13

30.32

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Query:  MASPAKLTSLLILTFLFII--QIHARESHFFSKIPNNNNGESTRIPTNIDPLTNTEKT-------------QDPNFIPQTQDTGYGLYGHESGQLPPFNE
        MA   + + L   T L ++  QIHAR+S+FF K   +      + P +  PL  +EKT             QDP F+P++   GYGLYGHE+     +N 
Subjt:  MASPAKLTSLLILTFLFII--QIHARESHFFSKIPNNNNGESTRIPTNIDPLTNTEKT-------------QDPNFIPQTQDTGYGLYGHESGQLPPFNE

Query:  KYDDEE---NKYRGNDAVSFKT-------ESEEYYNNGDVN-------------NNNNFQNSN-----SYKKPYENSFY---YNKDLYDN----------
          D++E   N  + ++ V+ KT       E+EE +NN + N             NN  F N+N     ++K+ + N+ Y   Y K+ ++N          
Subjt:  KYDDEE---NKYRGNDAVSFKT-------ESEEYYNNGDVN-------------NNNNFQNSN-----SYKKPYENSFY---YNKDLYDN----------

Query:  -----RRQSFP--NARLSRNDYTTTSY-DNYNGNSNGRDNANNVVRQGMSDTRFMGNGKYFYDLDKE---PHHYRNS
             + +SFP  N    +N Y + +Y       +  +  ++N+ RQGMSDTRFM  G Y+YDL  +    H+YR S
Subjt:  -----RRQSFP--NARLSRNDYTTTSY-DNYNGNSNGRDNANNVVRQGMSDTRFMGNGKYFYDLDKE---PHHYRNS

AT2G33850.1 unknown protein

1.0e-14

32.12

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Query:  LILTFLFIIQIHARESHFFSKIPNNNNGESTRIPTNIDPLTNTEK----TQDPNFIPQTQDTGYGLYGHE---SGQLPPFNEKYDDEEN----------K
        L+   LF  QI AR S+ F K    +  E    P N+ P+   EK     Q+P FIPQ+++ GYGLYGHE   +      N KY+D  N           
Subjt:  LILTFLFIIQIHARESHFFSKIPNNNNGESTRIPTNIDPLTNTEK----TQDPNFIPQTQDTGYGLYGHE---SGQLPPFNEKYDDEEN----------K

Query:  YRGNDAVSFKTESEEYYNNGDVNNNNN----FQNSNSY---------KKPYENSFYYNKD--LYDNRRQSFPNARLSRNDYTTTSYDNYNGNSNGRDNAN
               S+K   E Y    ++ +NN     ++NSN+Y           PY+   Y NKD   Y+N     PN   +       +Y  YN         N
Subjt:  YRGNDAVSFKTESEEYYNNGDVNNNNN----FQNSNSY---------KKPYENSFYYNKD--LYDNRRQSFPNARLSRNDYTTTSYDNYNGNSNGRDNAN

Query:  NVVRQGMSDTRFMGNGKYFYDLDKEPHHYRNSRGNFGN----------NNNADDYGRYQNDEAEFQDESDQFLP
        NV RQGMSDTR+M NGKY+YDLD + +H R  + ++ N          +N  + Y   Q  E   +++ DQ  P
Subjt:  NVVRQGMSDTRFMGNGKYFYDLDKEPHHYRNSRGNFGN----------NNNADDYGRYQNDEAEFQDESDQFLP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTTCCCCAGCCAAACTCACCTCTCTTTTGATTCTCACTTTTCTCTTCATCATTCAAATCCACGCTAGAGAAAGCCACTTCTTTAGCAAAATTCCCAACAACAACAA
TGGGGAATCGACCCGAATCCCGACCAACATCGACCCTTTAACCAACACCGAAAAAACCCAAGACCCCAATTTCATCCCTCAAACTCAAGACACTGGCTACGGTCTCTACG
GTCACGAATCGGGCCAGCTCCCTCCTTTCAATGAGAAATATGATGACGAAGAAAACAAATACAGAGGAAACGACGCCGTTTCGTTCAAAACGGAGTCAGAGGAGTACTAC
AACAACGGCGATGTAAACAACAACAACAATTTCCAAAACAGCAACTCGTATAAAAAGCCGTACGAGAATTCGTTTTACTACAACAAGGATTTATACGACAACCGACGACA
AAGCTTCCCAAACGCCCGCCTTTCCCGTAATGATTACACAACAACTTCATACGACAACTACAATGGCAACAGCAACGGCCGCGACAATGCGAATAACGTTGTGCGACAAG
GGATGAGCGACACGAGATTCATGGGGAATGGAAAGTACTTTTATGACCTCGACAAAGAGCCTCATCATTACCGCAACTCAAGGGGTAATTTCGGAAACAACAACAACGCA
GATGACTACGGAAGATACCAAAATGATGAGGCTGAATTCCAGGACGAATCCGATCAGTTCTTGCCATAA

mRNA sequence

Show/hide mRNA sequence

CCAACTATCCTTCACTATACATACACACTTAAAATCTCTCATATACCACAATGGCTTCCCCAGCCAAACTCACCTCTCTTTTGATTCTCACTTTTCTCTTCATCATTCAA
ATCCACGCTAGAGAAAGCCACTTCTTTAGCAAAATTCCCAACAACAACAATGGGGAATCGACCCGAATCCCGACCAACATCGACCCTTTAACCAACACCGAAAAAACCCA
AGACCCCAATTTCATCCCTCAAACTCAAGACACTGGCTACGGTCTCTACGGTCACGAATCGGGCCAGCTCCCTCCTTTCAATGAGAAATATGATGACGAAGAAAACAAAT
ACAGAGGAAACGACGCCGTTTCGTTCAAAACGGAGTCAGAGGAGTACTACAACAACGGCGATGTAAACAACAACAACAATTTCCAAAACAGCAACTCGTATAAAAAGCCG
TACGAGAATTCGTTTTACTACAACAAGGATTTATACGACAACCGACGACAAAGCTTCCCAAACGCCCGCCTTTCCCGTAATGATTACACAACAACTTCATACGACAACTA
CAATGGCAACAGCAACGGCCGCGACAATGCGAATAACGTTGTGCGACAAGGGATGAGCGACACGAGATTCATGGGGAATGGAAAGTACTTTTATGACCTCGACAAAGAGC
CTCATCATTACCGCAACTCAAGGGGTAATTTCGGAAACAACAACAACGCAGATGACTACGGAAGATACCAAAATGATGAGGCTGAATTCCAGGACGAATCCGATCAGTTC
TTGCCATAAATTTCTCTCCATAACTAAATTATATATGAAGAAGAAAAAAAAAAAAGAAATATTTAGTTGAGTTCATATTAAATTGTGGTGTTACAACAAAAAAAAGACGT
GTCTATCATAGATTAAATTATCAATTATGTATTTTGAAAGTGCACTTATATATGTAATGTTTTCATTTTCATTATATCAATATATGTAAATTGTGAAAGATTGCTTATTG
TAATAGTTTTGTTTTTAATAAACAGCTCTACCAAGAACTTAGAACCGACACTTTGGGAGGAGTTATTTAATGAAATCATATGACGCAATGAATGC

Protein sequence

Show/hide protein sequence

MASPAKLTSLLILTFLFIIQIHARESHFFSKIPNNNNGESTRIPTNIDPLTNTEKTQDPNFIPQTQDTGYGLYGHESGQLPPFNEKYDDEENKYRGNDAVSFKTESEEYY
NNGDVNNNNNFQNSNSYKKPYENSFYYNKDLYDNRRQSFPNARLSRNDYTTTSYDNYNGNSNGRDNANNVVRQGMSDTRFMGNGKYFYDLDKEPHHYRNSRGNFGNNNNA
DDYGRYQNDEAEFQDESDQFLP

Sed0007130 (gene) of Chayote v1 genome