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Sed0007170 (gene) of Chayote v1 genome

Gene IDSed0007170
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG04:31347184..31347801
RNA-Seq ExpressionSed0007170
SyntenySed0007170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041046.1 uncharacterized protein E6C27_scaffold477G00170 [Cucumis melo var. makuwa]1.9e-2567.86Show/hide
Query:  IKARDSKENKVLVTVYTESQEPRPAVNPIKQPPNKAVVTNQWKQHIANTTTNNRGYNRRTELLKYSQRLRKSTRSPAPSPYARPPDPISSFKNKQPIARS
        I+A  SKENKVLVTVY+E QEPR  VN  ++     VV NQWKQ      T N+GYNRRTELLKYSQRLRKS RSPA SPY R P+PI   KNKQPIARS
Subjt:  IKARDSKENKVLVTVYTESQEPRPAVNPIKQPPNKAVVTNQWKQHIANTTTNNRGYNRRTELLKYSQRLRKSTRSPAPSPYARPPDPISSFKNKQPIARS

Query:  MVINLVCSSFSL
        + INLVC+SFSL
Subjt:  MVINLVCSSFSL

XP_008448775.1 PREDICTED: uncharacterized protein LOC103490841 isoform X1 [Cucumis melo]5.5e-2569.16Show/hide
Query:  SKENKVLVTVYTESQEPRPAVNPIKQPPNKAVVTNQWKQHIANTTTNNRGYNRRTELLKYSQRLRKSTRSPAPSPYARPPDPISSFKNKQPIARSMVINL
        SKENKVLVTVY+E QEPR  VN  ++     VV NQWKQ      T N+GYNRRTELLKYSQRLRKS RSPA SPY R P+PI   KNKQPIARS+ INL
Subjt:  SKENKVLVTVYTESQEPRPAVNPIKQPPNKAVVTNQWKQHIANTTTNNRGYNRRTELLKYSQRLRKSTRSPAPSPYARPPDPISSFKNKQPIARSMVINL

Query:  VCSSFSL
        VC+SFSL
Subjt:  VCSSFSL

XP_008448776.1 PREDICTED: uncharacterized protein LOC103490841 isoform X2 [Cucumis melo]1.6e-2167.33Show/hide
Query:  SKENKVLVTVYTESQEPRPAVNPIKQPPNKAVVTNQWKQHIANTTTNNRGYNRRTELLKYSQRLRKSTRSPAPSPYARPPDPISSFKNKQPIARSMVINL
        SKENKVLVTVY+E QEPR  VN  ++     VV NQWKQ      T N+GYNRRTELLKYSQRLRKS RSPA SPY R P+PI   KNKQPIARS+ INL
Subjt:  SKENKVLVTVYTESQEPRPAVNPIKQPPNKAVVTNQWKQHIANTTTNNRGYNRRTELLKYSQRLRKSTRSPAPSPYARPPDPISSFKNKQPIARSMVINL

Query:  V
        +
Subjt:  V

XP_011650374.1 uncharacterized protein LOC105434777 isoform X1 [Cucumis sativus]5.5e-2569.16Show/hide
Query:  SKENKVLVTVYTESQEPRPAVNPIKQPPNKAVVTNQWKQHIANTTTNNRGYNRRTELLKYSQRLRKSTRSPAPSPYARPPDPISSFKNKQPIARSMVINL
        SKENKVLVTVY+E QEPR  VN  ++     VV NQWKQ      T N+GYNRRTELLKYSQRLRKS RSPA SPY R P+PI   KNKQPIARS+ INL
Subjt:  SKENKVLVTVYTESQEPRPAVNPIKQPPNKAVVTNQWKQHIANTTTNNRGYNRRTELLKYSQRLRKSTRSPAPSPYARPPDPISSFKNKQPIARSMVINL

Query:  VCSSFSL
        VC+SFSL
Subjt:  VCSSFSL

XP_011650375.1 uncharacterized protein LOC105434777 isoform X2 [Cucumis sativus]1.6e-2167.33Show/hide
Query:  SKENKVLVTVYTESQEPRPAVNPIKQPPNKAVVTNQWKQHIANTTTNNRGYNRRTELLKYSQRLRKSTRSPAPSPYARPPDPISSFKNKQPIARSMVINL
        SKENKVLVTVY+E QEPR  VN  ++     VV NQWKQ      T N+GYNRRTELLKYSQRLRKS RSPA SPY R P+PI   KNKQPIARS+ INL
Subjt:  SKENKVLVTVYTESQEPRPAVNPIKQPPNKAVVTNQWKQHIANTTTNNRGYNRRTELLKYSQRLRKSTRSPAPSPYARPPDPISSFKNKQPIARSMVINL

Query:  V
        +
Subjt:  V

TrEMBL top hitse value%identityAlignment
A0A0A0L6R0 Uncharacterized protein2.6e-2569.16Show/hide
Query:  SKENKVLVTVYTESQEPRPAVNPIKQPPNKAVVTNQWKQHIANTTTNNRGYNRRTELLKYSQRLRKSTRSPAPSPYARPPDPISSFKNKQPIARSMVINL
        SKENKVLVTVY+E QEPR  VN  ++     VV NQWKQ      T N+GYNRRTELLKYSQRLRKS RSPA SPY R P+PI   KNKQPIARS+ INL
Subjt:  SKENKVLVTVYTESQEPRPAVNPIKQPPNKAVVTNQWKQHIANTTTNNRGYNRRTELLKYSQRLRKSTRSPAPSPYARPPDPISSFKNKQPIARSMVINL

Query:  VCSSFSL
        VC+SFSL
Subjt:  VCSSFSL

A0A1S3BKH3 uncharacterized protein LOC103490841 isoform X12.6e-2569.16Show/hide
Query:  SKENKVLVTVYTESQEPRPAVNPIKQPPNKAVVTNQWKQHIANTTTNNRGYNRRTELLKYSQRLRKSTRSPAPSPYARPPDPISSFKNKQPIARSMVINL
        SKENKVLVTVY+E QEPR  VN  ++     VV NQWKQ      T N+GYNRRTELLKYSQRLRKS RSPA SPY R P+PI   KNKQPIARS+ INL
Subjt:  SKENKVLVTVYTESQEPRPAVNPIKQPPNKAVVTNQWKQHIANTTTNNRGYNRRTELLKYSQRLRKSTRSPAPSPYARPPDPISSFKNKQPIARSMVINL

Query:  VCSSFSL
        VC+SFSL
Subjt:  VCSSFSL

A0A1S3BL45 uncharacterized protein LOC103490841 isoform X27.9e-2267.33Show/hide
Query:  SKENKVLVTVYTESQEPRPAVNPIKQPPNKAVVTNQWKQHIANTTTNNRGYNRRTELLKYSQRLRKSTRSPAPSPYARPPDPISSFKNKQPIARSMVINL
        SKENKVLVTVY+E QEPR  VN  ++     VV NQWKQ      T N+GYNRRTELLKYSQRLRKS RSPA SPY R P+PI   KNKQPIARS+ INL
Subjt:  SKENKVLVTVYTESQEPRPAVNPIKQPPNKAVVTNQWKQHIANTTTNNRGYNRRTELLKYSQRLRKSTRSPAPSPYARPPDPISSFKNKQPIARSMVINL

Query:  V
        +
Subjt:  V

A0A5A7TG76 Uncharacterized protein9.1e-2667.86Show/hide
Query:  IKARDSKENKVLVTVYTESQEPRPAVNPIKQPPNKAVVTNQWKQHIANTTTNNRGYNRRTELLKYSQRLRKSTRSPAPSPYARPPDPISSFKNKQPIARS
        I+A  SKENKVLVTVY+E QEPR  VN  ++     VV NQWKQ      T N+GYNRRTELLKYSQRLRKS RSPA SPY R P+PI   KNKQPIARS
Subjt:  IKARDSKENKVLVTVYTESQEPRPAVNPIKQPPNKAVVTNQWKQHIANTTTNNRGYNRRTELLKYSQRLRKSTRSPAPSPYARPPDPISSFKNKQPIARS

Query:  MVINLVCSSFSL
        + INLVC+SFSL
Subjt:  MVINLVCSSFSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAAGGCAAGGGACTCAAAAGAGAACAAAGTGTTGGTGACAGTGTATACTGAGAGCCAAGAACCAAGACCAGCAGTGAATCCTATAAAACAACCTCCTAACAAAGC
AGTTGTCACAAATCAATGGAAACAACACATAGCTAATACTACTACTAATAATAGAGGATACAATAGGAGGACTGAGCTCCTCAAGTACTCGCAACGCCTTCGAAAGTCAA
CACGATCGCCTGCTCCCTCTCCGTATGCCCGACCTCCCGACCCGATATCGTCTTTCAAGAACAAGCAACCGATCGCGAGAAGCATGGTGATCAATCTTGTTTGCTCCTCC
TTTTCGCTAAGTGTTGGAGGTGTACCTATTCAAATGTCAAAATACAACTTTGCTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCAAGGCAAGGGACTCAAAAGAGAACAAAGTGTTGGTGACAGTGTATACTGAGAGCCAAGAACCAAGACCAGCAGTGAATCCTATAAAACAACCTCCTAACAAAGC
AGTTGTCACAAATCAATGGAAACAACACATAGCTAATACTACTACTAATAATAGAGGATACAATAGGAGGACTGAGCTCCTCAAGTACTCGCAACGCCTTCGAAAGTCAA
CACGATCGCCTGCTCCCTCTCCGTATGCCCGACCTCCCGACCCGATATCGTCTTTCAAGAACAAGCAACCGATCGCGAGAAGCATGGTGATCAATCTTGTTTGCTCCTCC
TTTTCGCTAAGTGTTGGAGGTGTACCTATTCAAATGTCAAAATACAACTTTGCTCTTTGA
Protein sequenceShow/hide protein sequence
MIKARDSKENKVLVTVYTESQEPRPAVNPIKQPPNKAVVTNQWKQHIANTTTNNRGYNRRTELLKYSQRLRKSTRSPAPSPYARPPDPISSFKNKQPIARSMVINLVCSS
FSLSVGGVPIQMSKYNFAL