; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0007201 (gene) of Chayote v1 genome

Gene IDSed0007201
OrganismSechium edule (Chayote v1)
Description(-)-germacrene D synthase-like
Genome locationLG10:32146262..32149218
RNA-Seq ExpressionSed0007201
SyntenySed0007201
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016102 - diterpenoid biosynthetic process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000287 - magnesium ion binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0010333 - terpene synthase activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR001906 - Terpene synthase, N-terminal domain
IPR008930 - Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
IPR008949 - Isoprenoid synthase domain superfamily
IPR036965 - Terpene synthase, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN55986.2 hypothetical protein Csa_011696 [Cucumis sativus]3.5e-3866.15Show/hide
Query:  YFLSPTSNTLIIDTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDSSSCFAEEVKYALKWPIFKTFPRLMSKNYISLYNNDL
        +F+S        + +G FKESI KDE GLLSLYEASHLRM GENILD+AL FTTT LQ IAMDS+S F++EVK++LKWPI+K  PR MS++YISLY N+ 
Subjt:  YFLSPTSNTLIIDTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDSSSCFAEEVKYALKWPIFKTFPRLMSKNYISLYNNDL

Query:  LHNNVLLTFAKLDYNLLQNVYHKEVAEFSR
        L +NVLLTFAKLDYN LQ +Y KE+ EFSR
Subjt:  LHNNVLLTFAKLDYNLLQNVYHKEVAEFSR

XP_004151461.3 (-)-germacrene D synthase [Cucumis sativus]3.5e-3866.15Show/hide
Query:  YFLSPTSNTLIIDTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDSSSCFAEEVKYALKWPIFKTFPRLMSKNYISLYNNDL
        +F+S        + +G FKESI KDE GLLSLYEASHLRM GENILD+AL FTTT LQ IAMDS+S F++EVK++LKWPI+K  PR MS++YISLY N+ 
Subjt:  YFLSPTSNTLIIDTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDSSSCFAEEVKYALKWPIFKTFPRLMSKNYISLYNNDL

Query:  LHNNVLLTFAKLDYNLLQNVYHKEVAEFSR
        L +NVLLTFAKLDYN LQ +Y KE+ EFSR
Subjt:  LHNNVLLTFAKLDYNLLQNVYHKEVAEFSR

XP_022143456.1 (-)-germacrene D synthase-like isoform X1 [Momordica charantia]7.0e-3942.98Show/hide
Query:  ANDAVPRRSANFQPSVWGDYFLSPTSNT------------------------------------------------------------------------
        +ND V RRSANFQPSVWGDYFL    NT                                                                        
Subjt:  ANDAVPRRSANFQPSVWGDYFLSPTSNT------------------------------------------------------------------------

Query:  ---------------------LIIDTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDSSSCFAEEVKYALKWPIFKTFPRLM
                               I+  G FKES+ KDE G+LSLYEASHLR++GE+ILD+AL FTTTHLQ +AMDSSS FAEE KYALKWPI+K  PR M
Subjt:  ---------------------LIIDTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDSSSCFAEEVKYALKWPIFKTFPRLM

Query:  SKNYISLYNNDLLHNNVLLTFAKLDYNLLQNVYHKEVAEFSR
        +++YISLY+ND L +NVLLTF+KLD+N LQ +Y KE+ EFSR
Subjt:  SKNYISLYNNDLLHNNVLLTFAKLDYNLLQNVYHKEVAEFSR

XP_022143457.1 (-)-germacrene D synthase-like isoform X2 [Momordica charantia]7.0e-3942.98Show/hide
Query:  ANDAVPRRSANFQPSVWGDYFLSPTSNT------------------------------------------------------------------------
        +ND V RRSANFQPSVWGDYFL    NT                                                                        
Subjt:  ANDAVPRRSANFQPSVWGDYFLSPTSNT------------------------------------------------------------------------

Query:  ---------------------LIIDTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDSSSCFAEEVKYALKWPIFKTFPRLM
                               I+  G FKES+ KDE G+LSLYEASHLR++GE+ILD+AL FTTTHLQ +AMDSSS FAEE KYALKWPI+K  PR M
Subjt:  ---------------------LIIDTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDSSSCFAEEVKYALKWPIFKTFPRLM

Query:  SKNYISLYNNDLLHNNVLLTFAKLDYNLLQNVYHKEVAEFSR
        +++YISLY+ND L +NVLLTF+KLD+N LQ +Y KE+ EFSR
Subjt:  SKNYISLYNNDLLHNNVLLTFAKLDYNLLQNVYHKEVAEFSR

XP_022143458.1 (-)-germacrene D synthase-like isoform X3 [Momordica charantia]2.0e-3869.75Show/hide
Query:  IDTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDSSSCFAEEVKYALKWPIFKTFPRLMSKNYISLYNNDLLHNNVLLTFAK
        I+  G FKES+ KDE G+LSLYEASHLR++GE+ILD+AL FTTTHLQ +AMDSSS FAEE KYALKWPI+K  PR M+++YISLY+ND L +NVLLTF+K
Subjt:  IDTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDSSSCFAEEVKYALKWPIFKTFPRLMSKNYISLYNNDLLHNNVLLTFAK

Query:  LDYNLLQNVYHKEVAEFSR
        LD+N LQ +Y KE+ EFSR
Subjt:  LDYNLLQNVYHKEVAEFSR

TrEMBL top hitse value%identityAlignment
A0A0A0L2M0 Uncharacterized protein1.7e-3866.15Show/hide
Query:  YFLSPTSNTLIIDTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDSSSCFAEEVKYALKWPIFKTFPRLMSKNYISLYNNDL
        +F+S        + +G FKESI KDE GLLSLYEASHLRM GENILD+AL FTTT LQ IAMDS+S F++EVK++LKWPI+K  PR MS++YISLY N+ 
Subjt:  YFLSPTSNTLIIDTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDSSSCFAEEVKYALKWPIFKTFPRLMSKNYISLYNNDL

Query:  LHNNVLLTFAKLDYNLLQNVYHKEVAEFSR
        L +NVLLTFAKLDYN LQ +Y KE+ EFSR
Subjt:  LHNNVLLTFAKLDYNLLQNVYHKEVAEFSR

A0A0A0LN25 Uncharacterized protein8.3e-3870.94Show/hide
Query:  TGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDSSSCFAEEVKYALKWPIFKTFPRLMSKNYISLY-NNDLLHNNVLLTFAKLD
        +G FKESI KDERGLLSLYEASHLRM GENI+DEAL FT+T L+ +AMDS+S F+EE KYALKWPI+KT PR M++NYISLY NN L  +N+LLTFAKLD
Subjt:  TGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDSSSCFAEEVKYALKWPIFKTFPRLMSKNYISLY-NNDLLHNNVLLTFAKLD

Query:  YNLLQNVYHKEVAEFSR
        YN LQ +Y +E+ E SR
Subjt:  YNLLQNVYHKEVAEFSR

A0A6J1CQA8 (-)-germacrene D synthase-like isoform X13.4e-3942.98Show/hide
Query:  ANDAVPRRSANFQPSVWGDYFLSPTSNT------------------------------------------------------------------------
        +ND V RRSANFQPSVWGDYFL    NT                                                                        
Subjt:  ANDAVPRRSANFQPSVWGDYFLSPTSNT------------------------------------------------------------------------

Query:  ---------------------LIIDTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDSSSCFAEEVKYALKWPIFKTFPRLM
                               I+  G FKES+ KDE G+LSLYEASHLR++GE+ILD+AL FTTTHLQ +AMDSSS FAEE KYALKWPI+K  PR M
Subjt:  ---------------------LIIDTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDSSSCFAEEVKYALKWPIFKTFPRLM

Query:  SKNYISLYNNDLLHNNVLLTFAKLDYNLLQNVYHKEVAEFSR
        +++YISLY+ND L +NVLLTF+KLD+N LQ +Y KE+ EFSR
Subjt:  SKNYISLYNNDLLHNNVLLTFAKLDYNLLQNVYHKEVAEFSR

A0A6J1CQS0 (-)-germacrene D synthase-like isoform X39.8e-3969.75Show/hide
Query:  IDTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDSSSCFAEEVKYALKWPIFKTFPRLMSKNYISLYNNDLLHNNVLLTFAK
        I+  G FKES+ KDE G+LSLYEASHLR++GE+ILD+AL FTTTHLQ +AMDSSS FAEE KYALKWPI+K  PR M+++YISLY+ND L +NVLLTF+K
Subjt:  IDTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDSSSCFAEEVKYALKWPIFKTFPRLMSKNYISLYNNDLLHNNVLLTFAK

Query:  LDYNLLQNVYHKEVAEFSR
        LD+N LQ +Y KE+ EFSR
Subjt:  LDYNLLQNVYHKEVAEFSR

A0A6J1CQW1 (-)-germacrene D synthase-like isoform X23.4e-3942.98Show/hide
Query:  ANDAVPRRSANFQPSVWGDYFLSPTSNT------------------------------------------------------------------------
        +ND V RRSANFQPSVWGDYFL    NT                                                                        
Subjt:  ANDAVPRRSANFQPSVWGDYFLSPTSNT------------------------------------------------------------------------

Query:  ---------------------LIIDTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDSSSCFAEEVKYALKWPIFKTFPRLM
                               I+  G FKES+ KDE G+LSLYEASHLR++GE+ILD+AL FTTTHLQ +AMDSSS FAEE KYALKWPI+K  PR M
Subjt:  ---------------------LIIDTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDSSSCFAEEVKYALKWPIFKTFPRLM

Query:  SKNYISLYNNDLLHNNVLLTFAKLDYNLLQNVYHKEVAEFSR
        +++YISLY+ND L +NVLLTF+KLD+N LQ +Y KE+ EFSR
Subjt:  SKNYISLYNNDLLHNNVLLTFAKLDYNLLQNVYHKEVAEFSR

SwissProt top hitse value%identityAlignment
B2KSJ5 (+)-gamma-cadinene synthase7.0e-2650.82Show/hide
Query:  IDTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDSSS---CFAEEVKYALKWPIFKTFPRLMSKNYISLYNNDLLHNNVLLT
        +D  G FKES+ +DERGLLSLYEASH+   GE +L+EAL FTTTHLQ      S+    FA EV  ALK PI K+ PR+ ++ Y+ +Y     HN  LL 
Subjt:  IDTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDSSS---CFAEEVKYALKWPIFKTFPRLMSKNYISLYNNDLLHNNVLLT

Query:  FAKLDYNLLQNVYHKEVAEFSR
        F+KLD+N+LQ ++ KE++E  R
Subjt:  FAKLDYNLLQNVYHKEVAEFSR

B6SCF5 Alpha-humulene synthase3.5e-2550.41Show/hide
Query:  DTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKI---AMDSSSCFAEEVKYALKWPIFKTFPRLMSKNYISLYNNDLLHNNVLLTF
        D  G FKE +  D  GLLSLYEASHL   GENILDEAL FTTTHL +      +     + E+  AL+ P+ K+  RL ++++IS+Y N+  HN VLL  
Subjt:  DTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKI---AMDSSSCFAEEVKYALKWPIFKTFPRLMSKNYISLYNNDLLHNNVLLTF

Query:  AKLDYNLLQNVYHKEVAEFSR
        AKLD+NLLQ+++ KE++E SR
Subjt:  AKLDYNLLQNVYHKEVAEFSR

B6SCF6 Germacrene-A synthase6.0e-2550.41Show/hide
Query:  DTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKI---AMDSSSCFAEEVKYALKWPIFKTFPRLMSKNYISLYNNDLLHNNVLLTF
        D  G FKE +  D  GLLSLYEASHL   GENILDEAL FTTTHL +      +     ++E+  AL+ P+ K+  RL ++++IS+Y N+  HN VLL  
Subjt:  DTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKI---AMDSSSCFAEEVKYALKWPIFKTFPRLMSKNYISLYNNDLLHNNVLLTF

Query:  AKLDYNLLQNVYHKEVAEFSR
        AKLD+NLLQ+++ KE++E SR
Subjt:  AKLDYNLLQNVYHKEVAEFSR

G5CV46 Viridiflorene synthase3.5e-2544.62Show/hide
Query:  YFLSPTSNTLIIDTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDSSSCFAEEVKYALKWPIFKTFPRLMSKNYISLYNNDL
        Y++SP   +   D  G FKES+  D RG+L+LYEASH+R  GE+ L+EAL F+T HL+  A    S  +++V +AL+  + K+ PR+ ++ +IS+Y  + 
Subjt:  YFLSPTSNTLIIDTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDSSSCFAEEVKYALKWPIFKTFPRLMSKNYISLYNNDL

Query:  LHNNVLLTFAKLDYNLLQNVYHKEVAEFSR
        L N+V L FAKLD+NLLQ ++ +E++E SR
Subjt:  LHNNVLLTFAKLDYNLLQNVYHKEVAEFSR

Q6Q3H3 (-)-germacrene D synthase8.0e-3048.34Show/hide
Query:  VISANDAVPRRSANFQPSVWGDYFLSPTSNTLIIDTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDSSSCFAEEVKYALKW
        V+SA + V   S  F+      Y +S        D  G FKES++ D RG+LSLYEA+H R+ GE+ILDEAL FTTTHLQ     SS+  AE+V +ALK 
Subjt:  VISANDAVPRRSANFQPSVWGDYFLSPTSNTLIIDTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDSSSCFAEEVKYALKW

Query:  PIFKTFPRLMSKNYISLYNNDLLHNNVLLTFAKLDYNLLQNVYHKEVAEFS
        PI K  PRL +++Y S+Y  D  HN  LL  AKLD+NLLQ ++ KE+++ S
Subjt:  PIFKTFPRLMSKNYISLYNNDLLHNNVLLTFAKLDYNLLQNVYHKEVAEFS

Arabidopsis top hitse value%identityAlignment
AT3G14490.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein4.4e-1536.97Show/hide
Query:  GAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMD----SSSCFAEEVKYALKWPIFKTFPRLMSKNYISLYNNDLLHNNVLLTFAK
        G FKES+A+D RG+L LYEA+HL    E+I+DEAL+FT   L+ +  +    +S   ++ ++ AL    +     L+++ YIS Y  +  H+  LL FAK
Subjt:  GAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMD----SSSCFAEEVKYALKWPIFKTFPRLMSKNYISLYNNDLLHNNVLLTFAK

Query:  LDYNLLQNVYHKEVAEFSR
        L++N  Q  Y +E+ + ++
Subjt:  LDYNLLQNVYHKEVAEFSR

AT3G14540.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein1.2e-1536.97Show/hide
Query:  GAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKI----AMDSSSCFAEEVKYALKWPIFKTFPRLMSKNYISLYNNDLLHNNVLLTFAK
        G FKES+AKD RG+L L+E +HL    E+I+DEAL FT  HL+ +       +S    + ++ +L  P +     L+++ YIS Y  +  +N +LL FAK
Subjt:  GAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKI----AMDSSSCFAEEVKYALKWPIFKTFPRLMSKNYISLYNNDLLHNNVLLTFAK

Query:  LDYNLLQNVYHKEVAEFSR
        L++N  Q  Y +E+   ++
Subjt:  LDYNLLQNVYHKEVAEFSR

AT3G29110.1 Terpenoid cyclases/Protein prenyltransferases superfamily protein2.0e-1539.13Show/hide
Query:  DTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDS--SSCFAEEVKYALKWPIFKTFPRLMSKNYISLYNNDLLHNNVLLTFA
        +  G FKES+ +D RG+LSLYEA+HL  + + ILDEAL F + +L  +A D    S  +  ++ AL          +++  YI  Y  ++ H+ +LL FA
Subjt:  DTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDS--SSCFAEEVKYALKWPIFKTFPRLMSKNYISLYNNDLLHNNVLLTFA

Query:  KLDYNLLQNVYHKEV
        KL++NL+Q +Y +EV
Subjt:  KLDYNLLQNVYHKEV

AT5G23960.1 terpene synthase 211.1e-1842.37Show/hide
Query:  DTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDSSSCFAEEVKYALKWPIFKTFPRLMSKNYISLYNNDLLHNNVLLTFAKL
        D  G FK  +  D  G+LSLYEA+     GE+I+DEAL F+ +HL++I+  SS   A  +K ALK P  K   R+ ++ YIS Y  +   +  LL FAK+
Subjt:  DTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDSSSCFAEEVKYALKWPIFKTFPRLMSKNYISLYNNDLLHNNVLLTFAKL

Query:  DYNLLQNVYHKEVAEFSR
        D+NLLQ ++ +E+A  +R
Subjt:  DYNLLQNVYHKEVAEFSR

AT5G23960.2 terpene synthase 211.1e-1842.37Show/hide
Query:  DTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDSSSCFAEEVKYALKWPIFKTFPRLMSKNYISLYNNDLLHNNVLLTFAKL
        D  G FK  +  D  G+LSLYEA+     GE+I+DEAL F+ +HL++I+  SS   A  +K ALK P  K   R+ ++ YIS Y  +   +  LL FAK+
Subjt:  DTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDSSSCFAEEVKYALKWPIFKTFPRLMSKNYISLYNNDLLHNNVLLTFAKL

Query:  DYNLLQNVYHKEVAEFSR
        D+NLLQ ++ +E+A  +R
Subjt:  DYNLLQNVYHKEVAEFSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATTTGTAATTTCAGCCAATGATGCCGTCCCTCGTCGATCTGCAAACTTTCAGCCAAGTGTTTGGGGAGATTATTTTCTTTCTCCTACTTCAAACACTCTGATTAT
CGATACAACGGGAGCATTCAAAGAATCTATTGCAAAGGATGAAAGGGGTTTATTAAGTTTGTACGAGGCATCTCACTTAAGAATGAGTGGAGAAAATATTTTGGATGAAG
CCTTGACATTTACAACTACTCATCTTCAAAAAATAGCCATGGATTCAAGCTCTTGTTTTGCAGAAGAAGTTAAATATGCTTTGAAATGGCCAATCTTTAAAACATTTCCA
AGGCTCATGAGCAAGAACTATATCTCACTCTACAACAATGATCTATTGCATAACAATGTTTTGCTCACTTTTGCCAAGTTAGACTACAACCTTTTGCAAAATGTTTACCA
TAAAGAAGTGGCTGAATTCTCAAGGTGTGCCTCGATAATCATTTCATTTTTTGTTTCTAGTTTTTCATTTTTTTCATTTTGGTATTTATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCATTTGTAATTTCAGCCAATGATGCCGTCCCTCGTCGATCTGCAAACTTTCAGCCAAGTGTTTGGGGAGATTATTTTCTTTCTCCTACTTCAAACACTCTGATTAT
CGATACAACGGGAGCATTCAAAGAATCTATTGCAAAGGATGAAAGGGGTTTATTAAGTTTGTACGAGGCATCTCACTTAAGAATGAGTGGAGAAAATATTTTGGATGAAG
CCTTGACATTTACAACTACTCATCTTCAAAAAATAGCCATGGATTCAAGCTCTTGTTTTGCAGAAGAAGTTAAATATGCTTTGAAATGGCCAATCTTTAAAACATTTCCA
AGGCTCATGAGCAAGAACTATATCTCACTCTACAACAATGATCTATTGCATAACAATGTTTTGCTCACTTTTGCCAAGTTAGACTACAACCTTTTGCAAAATGTTTACCA
TAAAGAAGTGGCTGAATTCTCAAGGTGTGCCTCGATAATCATTTCATTTTTTGTTTCTAGTTTTTCATTTTTTTCATTTTGGTATTTATTTTAA
Protein sequenceShow/hide protein sequence
MSFVISANDAVPRRSANFQPSVWGDYFLSPTSNTLIIDTTGAFKESIAKDERGLLSLYEASHLRMSGENILDEALTFTTTHLQKIAMDSSSCFAEEVKYALKWPIFKTFP
RLMSKNYISLYNNDLLHNNVLLTFAKLDYNLLQNVYHKEVAEFSRCASIIISFFVSSFSFFSFWYLF