CuGenDBv2

Gene ID	Sed0007233
Organism	Sechium edule (Chayote v1)
Description	protein LITTLE ZIPPER 4
Genome location	LG04:29500462..29501777
RNA-Seq Expression	Sed0007233
Synteny	Sed0007233
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR039312 - Protein LITTLE ZIPPER

Homology

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GenBank top hits

e value

%identity

Alignment

KAB1223589.1 hypothetical protein CJ030_MR2G024120 [Morella rubra]

9.2e-22

84.72

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Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNSKINASKSIPDLNLSSASVTNPSN
        MERLNS+LYLQNCYIMKENERLRKKAQ+LNQENQVLLSELKQKLSKGN K NA+ +IPDLNLSS+S  NPS+
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNSKINASKSIPDLNLSSASVTNPSN

XP_007027705.2 PREDICTED: protein LITTLE ZIPPER 4 isoform X3 [Theobroma cacao]

1.2e-21

86.11

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Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNSKINASKSIPDLNLSSASVTNPSN
        MERLNS LYLQNCYIMKENERLRKKAQLLNQENQ LLSELKQKLSKGNSK N++ +IPDLNLSS+S  NPSN
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNSKINASKSIPDLNLSSASVTNPSN

XP_008442826.1 PREDICTED: protein LITTLE ZIPPER 4 [Cucumis melo]

1.3e-23

91.67

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Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNSKINASKSIPDLNLSSASVTNPSN
        MERLNSELYLQNCYIMKENERLRKKAQLLNQENQ LLSELKQKLSKGNSK NASKSIPDLNLSSA+ +N SN
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNSKINASKSIPDLNLSSASVTNPSN

XP_022144704.1 protein LITTLE ZIPPER 4 [Momordica charantia]

3.7e-23

91.78

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Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNSKINA-SKSIPDLNLSSASVTNPSN
        MERLNS+LYLQNCYIMKENERLRKKAQ+LNQENQ LLSELKQKLSKG+SK NA SKSIPDLNLSSASVTNPSN
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNSKINA-SKSIPDLNLSSASVTNPSN

XP_022935644.1 protein LITTLE ZIPPER 4 [Cucurbita moschata]

1.1e-22

88.89

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Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNSKINASKSIPDLNLSSASVTNPSN
        MERLNSELYLQNCYIMKENERLRKKAQLLNQENQ LLSELKQKLSKG+SK N+SKSIPDLNLSSA+ +N SN
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNSKINASKSIPDLNLSSASVTNPSN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LE03 Uncharacterized protein

6.2e-24

91.67

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Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNSKINASKSIPDLNLSSASVTNPSN
        MERLNSELYLQNCYIMKENERLRKKAQLLNQENQ LLSELKQKLSKGNSK NASKSIPDLNLSSA+ +N SN
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNSKINASKSIPDLNLSSASVTNPSN

A0A1S3B7E3 protein LITTLE ZIPPER 4

6.2e-24

91.67

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Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNSKINASKSIPDLNLSSASVTNPSN
        MERLNSELYLQNCYIMKENERLRKKAQLLNQENQ LLSELKQKLSKGNSK NASKSIPDLNLSSA+ +N SN
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNSKINASKSIPDLNLSSASVTNPSN

A0A6J1CT31 protein LITTLE ZIPPER 4

1.8e-23

91.78

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Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNSKINA-SKSIPDLNLSSASVTNPSN
        MERLNS+LYLQNCYIMKENERLRKKAQ+LNQENQ LLSELKQKLSKG+SK NA SKSIPDLNLSSASVTNPSN
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNSKINA-SKSIPDLNLSSASVTNPSN

A0A6J1F606 protein LITTLE ZIPPER 4

5.2e-23

88.89

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Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNSKINASKSIPDLNLSSASVTNPSN
        MERLNSELYLQNCYIMKENERLRKKAQLLNQENQ LLSELKQKLSKG+SK N+SKSIPDLNLSSA+ +N SN
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNSKINASKSIPDLNLSSASVTNPSN

A0A6J1J6J7 protein LITTLE ZIPPER 4

5.2e-23

88.89

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Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNSKINASKSIPDLNLSSASVTNPSN
        MERLNSELYLQNCYIMKENERLRKKAQLLNQENQ LLSELKQKLSKG+SK N+SKSIPDLNLSSA+ +N SN
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNSKINASKSIPDLNLSSASVTNPSN

SwissProt top hits

e value

%identity

Alignment

Q56WL5 Protein LITTLE ZIPPER 4

3.3e-14

70.59

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Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLS--KGNSKINASKSIPDLNLSSAS
        MERLNS+LYLQNCYI+KENERLRKKAQ+LNQENQ LL ELKQKLS  K +S  N   +  + NLSS+S
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLS--KGNSKINASKSIPDLNLSSAS

Q9LXI8 Protein LITTLE ZIPPER 3

3.6e-13

68.18

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Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNSKINASKSIPDLNLSSAS
        MERLNS+L+++NCYIMKENERLRKKA+LLNQENQ LL +LKQKLSK  +  N S +  D   SSAS
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNSKINASKSIPDLNLSSAS

Arabidopsis top hits

e value

%identity

Alignment

AT2G45450.1 protein binding

1.1e-04

53.49

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Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQVLLSELKQK
        ME +N +LY++N  I++ENE+L+KKA LL+QEN+ L S L+ K
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQVLLSELKQK

AT3G52770.1 protein binding

2.6e-14

68.18

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Query:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNSKINASKSIPDLNLSSAS
        MERLNS+L+++NCYIMKENERLRKKA+LLNQENQ LL +LKQKLSK  +  N S +  D   SSAS
Subjt:  MERLNSELYLQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNSKINASKSIPDLNLSSAS

Sequences

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CDS sequence

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ATGGAGAGGCTAAATTCAGAGCTGTACTTGCAAAACTGTTACATAATGAAGGAAAATGAGAGACTAAGGAAGAAAGCTCAGCTTTTGAACCAAGAAAATCAAGTTCTTCT
TTCAGAACTGAAGCAGAAATTGTCAAAGGGAAATTCAAAAATCAATGCTTCAAAATCAATCCCTGATCTCAATCTCTCCTCTGCTTCTGTTACAAATCCTTCTAATTGA

mRNA sequence

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GTGCTTCTTCTGTTGAACAACAAACCTATCTCAAAAGGATAAATTAATAAAAGGGTTGGCTGGAATTTGGAAGAAGGATTGGTTGATATATAGATATAGAAATATATTTA
TATTTATATAATCAACCAAATTGTGGTTGATTTAGCAGAGGAAAAATGGAGAGGCTAAATTCAGAGCTGTACTTGCAAAACTGTTACATAATGAAGGAAAATGAGAGACT
AAGGAAGAAAGCTCAGCTTTTGAACCAAGAAAATCAAGTTCTTCTTTCAGAACTGAAGCAGAAATTGTCAAAGGGAAATTCAAAAATCAATGCTTCAAAATCAATCCCTG
ATCTCAATCTCTCCTCTGCTTCTGTTACAAATCCTTCTAATTGATTATATAAAATCAATGGAAGATGATGAAGATGAAGAAGAGATCATGATATCATATAACCCCACTGA
AGTTCAAATCTATTTTCATTTTTTGTGAATTATCATAGGCAACAGTAGCAAGTAGTTTGAGGTTGCAGTTATATAGGACAGCCTGGTAGCTTTAGCATCTTCTCTCTATA
TATGTTTATTTTATATATCTTTTTTGGGGGGTTCGGATTTGGATTTTATGTTCTTCAAAATGATGTAATCAGGCTATCTAATGGAAAAACCAATTTCAG

Protein sequence

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MERLNSELYLQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNSKINASKSIPDLNLSSASVTNPSN

Sed0007233 (gene) of Chayote v1 genome