; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0007247 (gene) of Chayote v1 genome

Gene IDSed0007247
OrganismSechium edule (Chayote v1)
DescriptionAutophagy-related 18
Genome locationLG11:27240092..27240688
RNA-Seq ExpressionSed0007247
SyntenySed0007247
Gene Ontology termsGO:0006396 - RNA processing (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO61546.1 hypothetical protein CCACVL1_23418 [Corchorus capsularis]9.3e-1251.76Show/hide
Query:  MKRASIESRKSINIVEGYKKDKVQFQNLLQDFLEIQKELVSKKRKLEVLKQRKETLVDEVRFLRRRYKYLQKLQNHNLDGVEEEL
        MKRASI SR+  N V+   K +++ QNLLQ+FLE+QKE V KK+KL+ +KQ++ETL+ EV+FLR+RY YL  +++   + VE++L
Subjt:  MKRASIESRKSINIVEGYKKDKVQFQNLLQDFLEIQKELVSKKRKLEVLKQRKETLVDEVRFLRRRYKYLQKLQNHNLDGVEEEL

OMO90686.1 Ubiquitin [Corchorus olitorius]4.2e-1247.47Show/hide
Query:  MKRASIESRKSINIVEGYKKDKVQFQNLLQDFLEIQKELVSKKRKLEVLKQRKETLVDEVRFLRRRYKYLQKLQNHNLDGVEEELGKEKPQSNAWLESK
        MKRASI SR+  N V+   K +++ QNLLQ+FLE+QKE V KKRKL+ +KQ++ETL+ EV+FLR+RY YL  +++   + VE++L + +   N +++S+
Subjt:  MKRASIESRKSINIVEGYKKDKVQFQNLLQDFLEIQKELVSKKRKLEVLKQRKETLVDEVRFLRRRYKYLQKLQNHNLDGVEEELGKEKPQSNAWLESK

XP_022132126.1 uncharacterized protein LOC111005070 [Momordica charantia]9.0e-1563.53Show/hide
Query:  MKRASIESRKSINIVEGYKKDKVQFQNLLQDFLEIQKELVSKKRKLEVLKQRKETLVDEVRFLRRRYKYLQKLQNHNLDGVEEEL
        MKRASI SRKS  IV    + + ++Q LLQDFLE+QK+ VSKKRKL+VL+QRKETL  EVRFLR+R +YLQKLQN   D + E+L
Subjt:  MKRASIESRKSINIVEGYKKDKVQFQNLLQDFLEIQKELVSKKRKLEVLKQRKETLVDEVRFLRRRYKYLQKLQNHNLDGVEEEL

XP_022750333.1 uncharacterized protein LOC111299419 isoform X1 [Durio zibethinus]4.6e-1143.43Show/hide
Query:  MKRASIESRKSINIVEGYKKDKVQFQNLLQDFLEIQKELVSKKRKLEVLKQRKETLVDEVRFLRRRYKYLQKLQNHNLDGVEEELGKEKPQSNAWLESK
        MKR+S+ S +  N V+   + +++ QNLLQ+FLE+QKE VSKK+K++ + Q++ETL+ EVRFLR+RY YL  +++   +  ++ +   +PQ N +L+SK
Subjt:  MKRASIESRKSINIVEGYKKDKVQFQNLLQDFLEIQKELVSKKRKLEVLKQRKETLVDEVRFLRRRYKYLQKLQNHNLDGVEEELGKEKPQSNAWLESK

XP_022750334.1 uncharacterized protein LOC111299419 isoform X2 [Durio zibethinus]4.6e-1143.43Show/hide
Query:  MKRASIESRKSINIVEGYKKDKVQFQNLLQDFLEIQKELVSKKRKLEVLKQRKETLVDEVRFLRRRYKYLQKLQNHNLDGVEEELGKEKPQSNAWLESK
        MKR+S+ S +  N V+   + +++ QNLLQ+FLE+QKE VSKK+K++ + Q++ETL+ EVRFLR+RY YL  +++   +  ++ +   +PQ N +L+SK
Subjt:  MKRASIESRKSINIVEGYKKDKVQFQNLLQDFLEIQKELVSKKRKLEVLKQRKETLVDEVRFLRRRYKYLQKLQNHNLDGVEEELGKEKPQSNAWLESK

TrEMBL top hitse value%identityAlignment
A0A1R3GU14 Uncharacterized protein4.5e-1251.76Show/hide
Query:  MKRASIESRKSINIVEGYKKDKVQFQNLLQDFLEIQKELVSKKRKLEVLKQRKETLVDEVRFLRRRYKYLQKLQNHNLDGVEEEL
        MKRASI SR+  N V+   K +++ QNLLQ+FLE+QKE V KK+KL+ +KQ++ETL+ EV+FLR+RY YL  +++   + VE++L
Subjt:  MKRASIESRKSINIVEGYKKDKVQFQNLLQDFLEIQKELVSKKRKLEVLKQRKETLVDEVRFLRRRYKYLQKLQNHNLDGVEEEL

A0A1R3J7E0 Ubiquitin2.0e-1247.47Show/hide
Query:  MKRASIESRKSINIVEGYKKDKVQFQNLLQDFLEIQKELVSKKRKLEVLKQRKETLVDEVRFLRRRYKYLQKLQNHNLDGVEEELGKEKPQSNAWLESK
        MKRASI SR+  N V+   K +++ QNLLQ+FLE+QKE V KKRKL+ +KQ++ETL+ EV+FLR+RY YL  +++   + VE++L + +   N +++S+
Subjt:  MKRASIESRKSINIVEGYKKDKVQFQNLLQDFLEIQKELVSKKRKLEVLKQRKETLVDEVRFLRRRYKYLQKLQNHNLDGVEEELGKEKPQSNAWLESK

A0A6J1BRD5 uncharacterized protein LOC1110050704.4e-1563.53Show/hide
Query:  MKRASIESRKSINIVEGYKKDKVQFQNLLQDFLEIQKELVSKKRKLEVLKQRKETLVDEVRFLRRRYKYLQKLQNHNLDGVEEEL
        MKRASI SRKS  IV    + + ++Q LLQDFLE+QK+ VSKKRKL+VL+QRKETL  EVRFLR+R +YLQKLQN   D + E+L
Subjt:  MKRASIESRKSINIVEGYKKDKVQFQNLLQDFLEIQKELVSKKRKLEVLKQRKETLVDEVRFLRRRYKYLQKLQNHNLDGVEEEL

A0A6P5ZBV4 uncharacterized protein LOC111299419 isoform X12.2e-1143.43Show/hide
Query:  MKRASIESRKSINIVEGYKKDKVQFQNLLQDFLEIQKELVSKKRKLEVLKQRKETLVDEVRFLRRRYKYLQKLQNHNLDGVEEELGKEKPQSNAWLESK
        MKR+S+ S +  N V+   + +++ QNLLQ+FLE+QKE VSKK+K++ + Q++ETL+ EVRFLR+RY YL  +++   +  ++ +   +PQ N +L+SK
Subjt:  MKRASIESRKSINIVEGYKKDKVQFQNLLQDFLEIQKELVSKKRKLEVLKQRKETLVDEVRFLRRRYKYLQKLQNHNLDGVEEELGKEKPQSNAWLESK

A0A6P5ZBZ9 uncharacterized protein LOC111299419 isoform X22.2e-1143.43Show/hide
Query:  MKRASIESRKSINIVEGYKKDKVQFQNLLQDFLEIQKELVSKKRKLEVLKQRKETLVDEVRFLRRRYKYLQKLQNHNLDGVEEELGKEKPQSNAWLESK
        MKR+S+ S +  N V+   + +++ QNLLQ+FLE+QKE VSKK+K++ + Q++ETL+ EVRFLR+RY YL  +++   +  ++ +   +PQ N +L+SK
Subjt:  MKRASIESRKSINIVEGYKKDKVQFQNLLQDFLEIQKELVSKKRKLEVLKQRKETLVDEVRFLRRRYKYLQKLQNHNLDGVEEELGKEKPQSNAWLESK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30630.1 unknown protein4.0e-0554.76Show/hide
Query:  LEIQKELVSKKRKLEVLKQRKETLVDEVRFLRRRYKYLQKLQ
        LE++KEL  K+++LE++KQ++ TL  EVRFLRRRY++L++ Q
Subjt:  LEIQKELVSKKRKLEVLKQRKETLVDEVRFLRRRYKYLQKLQ

AT5G57910.1 unknown protein1.4e-0536.49Show/hide
Query:  YKKDKVQFQ--NLLQDFLEIQKELVSKKRKLEVLKQRKETLVDEVRFLRRRYKYLQKLQNHNLDGVEEELGKEK
        ++  KV+F+  +L+QD+ E+  E  + +++L+ +++RK TL+ EVRFLRRRY++L++ Q   +  V    G +K
Subjt:  YKKDKVQFQ--NLLQDFLEIQKELVSKKRKLEVLKQRKETLVDEVRFLRRRYKYLQKLQNHNLDGVEEELGKEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGAGCTTCAATTGAATCTCGAAAGTCCATTAATATTGTTGAAGGTTACAAGAAGGATAAAGTTCAATTTCAAAATCTGCTGCAAGATTTCTTGGAAATCCAGAA
GGAACTTGTTTCAAAGAAGAGAAAATTGGAGGTTCTAAAACAGAGGAAGGAAACTCTGGTAGATGAAGTAAGATTTTTGAGACGAAGATACAAGTATTTGCAGAAATTGC
AGAATCATAATTTGGATGGTGTAGAGGAAGAATTAGGGAAGGAAAAGCCTCAGAGTAATGCATGGTTGGAAAGTAAAGGCAAAATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGAGCTTCAATTGAATCTCGAAAGTCCATTAATATTGTTGAAGGTTACAAGAAGGATAAAGTTCAATTTCAAAATCTGCTGCAAGATTTCTTGGAAATCCAGAA
GGAACTTGTTTCAAAGAAGAGAAAATTGGAGGTTCTAAAACAGAGGAAGGAAACTCTGGTAGATGAAGTAAGATTTTTGAGACGAAGATACAAGTATTTGCAGAAATTGC
AGAATCATAATTTGGATGGTGTAGAGGAAGAATTAGGGAAGGAAAAGCCTCAGAGTAATGCATGGTTGGAAAGTAAAGGCAAAATTTAG
Protein sequenceShow/hide protein sequence
MKRASIESRKSINIVEGYKKDKVQFQNLLQDFLEIQKELVSKKRKLEVLKQRKETLVDEVRFLRRRYKYLQKLQNHNLDGVEEELGKEKPQSNAWLESKGKI