CuGenDBv2

Gene ID	Sed0007255
Organism	Sechium edule (Chayote v1)
Description	UDP-N-acetylglucosamine1-carboxyvinyltransferase
Genome location	LG05:18011410..18014175
RNA-Seq Expression	Sed0007255
Synteny	Sed0007255
Gene Ontology terms	GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process) GO:0005730 - nucleolus (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7010308.1 hypothetical protein SDJN02_27101 [Cucurbita argyrosperma subsp. argyrosperma]

1.4e-50

70.65

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Query:  MHSRDKSAKAGSSRSSTDMDSEMDYFKIKKEIGFLTSSHMSWKDKKDIQNRKVVSLGGKSQKKQRLPLSVARPIMKKQKEREQKMVLES---QRFGGVSS
        MHSRDKSAKAGSSR+S DM+  M+   IKKEI FLTSSHMSWKDKK+I++RK+VSLGGK QKKQRLPLSVARPIMKKQKEREQKMV E     +FGG +S
Subjt:  MHSRDKSAKAGSSRSSTDMDSEMDYFKIKKEIGFLTSSHMSWKDKKDIQNRKVVSLGGKSQKKQRLPLSVARPIMKKQKEREQKMVLES---QRFGGVSS

Query:  SNNSRRKSSWNRRPEDQVLRSSEGFFKKGVLDVKHLLGRAPPRNSEFRSCDFGNELGGGGGKGRKKVG-KKNSKNKKKGGGKKQ
        SN+S R S   R+PE+QVL+SSEGFFK GVLDVKHLL  AP RNS     DFGNE+    GKGR+K G KKN+K+ KKGGGKK+
Subjt:  SNNSRRKSSWNRRPEDQVLRSSEGFFKKGVLDVKHLLGRAPPRNSEFRSCDFGNELGGGGGKGRKKVG-KKNSKNKKKGGGKKQ

XP_004140183.1 uncharacterized protein LOC101203308 [Cucumis sativus]

5.1e-53

69.63

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Query:  MHSRDKSAKAGSSRSSTDMDSEMDYFKIKKEIGFLTSSHMSWKDKKDIQNRKVVSLGGKSQKKQRLPLSVARPIMKKQKEREQKMVLES---QRFGGVSS
        MHSRDK AKAGSSR STDM+++M    IKKEI FLTSSHMSWKDKK+I++RK+VSLGGK QKKQRLPLSVARPIMKKQKEREQKMV E    ++FGG++S
Subjt:  MHSRDKSAKAGSSRSSTDMDSEMDYFKIKKEIGFLTSSHMSWKDKKDIQNRKVVSLGGKSQKKQRLPLSVARPIMKKQKEREQKMVLES---QRFGGVSS

Query:  SNNSRRKSSWNRRPEDQVLRSSEGFFKKGVLDVKHLLGRAPPRNS-------EFRSCDFGNELGGGGGKGRKKVG-KKNSKNKKKGGGKKQ
        S+NS RKSS  RRPE+QVL+SSEGFFK GVLDVKHLL  +  RN+        FR+ DFGNE+   GG GR+K G KKN+K+KKKGGGKK+
Subjt:  SNNSRRKSSWNRRPEDQVLRSSEGFFKKGVLDVKHLLGRAPPRNS-------EFRSCDFGNELGGGGGKGRKKVG-KKNSKNKKKGGGKKQ

XP_008449630.1 PREDICTED: uncharacterized protein LOC103491457 [Cucumis melo]

1.6e-54

71.2

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Query:  MHSRDKSAKAGSSRSSTDMDSEMDYFKIKKEIGFLTSSHMSWKDKKDIQNRKVVSLGGKSQKKQRLPLSVARPIMKKQKEREQKMVLES---QRFGGVSS
        MHSRDK AKAGSSR STDM+++M    IKKEI FLTSSHMSWKDKK+I++RK+VSLGGK QKKQRLPLSVARPIMKKQKEREQKMV E    ++FGG++S
Subjt:  MHSRDKSAKAGSSRSSTDMDSEMDYFKIKKEIGFLTSSHMSWKDKKDIQNRKVVSLGGKSQKKQRLPLSVARPIMKKQKEREQKMVLES---QRFGGVSS

Query:  SNNSRRKSSWNRRPEDQVLRSSEGFFKKGVLDVKHLL------GRAPPRNSE-FRSCDFGNELGGGGGKGRKKVG-KKNSKNKKKGGGKKQ
        S+NS RKSS  RRPE+QVL+SSEGFFK GVLDVKHLL         P RNS+ FR+ DFGNE+   GGKGR+K G KKN+K+KKKGGGKK+
Subjt:  SNNSRRKSSWNRRPEDQVLRSSEGFFKKGVLDVKHLL------GRAPPRNSE-FRSCDFGNELGGGGGKGRKKVG-KKNSKNKKKGGGKKQ

XP_022944773.1 uncharacterized protein LOC111449125 [Cucurbita moschata]

2.8e-51

71.2

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Query:  MHSRDKSAKAGSSRSSTDMDSEMDYFKIKKEIGFLTSSHMSWKDKKDIQNRKVVSLGGKSQKKQRLPLSVARPIMKKQKEREQKMVLES---QRFGGVSS
        MHSRDKSAKAGSSR+STDM+  M+   IKKEI FLTSSHMSWKDKK+I++RK+VSLGGK QKKQRLPLSVARPIMKKQKEREQKMV E     +FGG +S
Subjt:  MHSRDKSAKAGSSRSSTDMDSEMDYFKIKKEIGFLTSSHMSWKDKKDIQNRKVVSLGGKSQKKQRLPLSVARPIMKKQKEREQKMVLES---QRFGGVSS

Query:  SNNSRRKSSWNRRPEDQVLRSSEGFFKKGVLDVKHLLGRAPPRNSEFRSCDFGNELGGGGGKGRKKVG-KKNSKNKKKGGGKKQ
        SN+S R S   R+PE+QVL+SSEGFFK GVLDVKHLL  AP RNS     DFGNE+    GKGR+K G KKN+K+ KKGGGKK+
Subjt:  SNNSRRKSSWNRRPEDQVLRSSEGFFKKGVLDVKHLLGRAPPRNSEFRSCDFGNELGGGGGKGRKKVG-KKNSKNKKKGGGKKQ

XP_038900589.1 uncharacterized protein LOC120087770 isoform X1 [Benincasa hispida]

4.8e-51

67.71

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Query:  MHSRDKSAKAGSSRSSTDMDSEMDYFKIKKEIGFLTSSHMSWKDKKDIQNRKVVSLGGKSQKKQRLPLSVARPIMKKQKEREQKMVLES---QRFGGVSS
        MHSR+K AK GSSR STDM++EM    IKKEI FLTSSHMSWKD+K+I++RK+VSLGGK QKKQRLPLSVARPIMKKQKEREQKMV E    ++FGG++ 
Subjt:  MHSRDKSAKAGSSRSSTDMDSEMDYFKIKKEIGFLTSSHMSWKDKKDIQNRKVVSLGGKSQKKQRLPLSVARPIMKKQKEREQKMVLES---QRFGGVSS

Query:  SNNSRRKSSWNRRPEDQVLRSSEGFFKKGVLDVKHLLGRA------PPRNSE-FRSCDFGNELGGGGGKGRKKVGKKNSKNKKKGGGKKQRH
        S+NSRR S   R+PE+QVL+SSEGFFK GVLDVKHLL  A      P RNS+ FR+ DFGNE+   G KGR+K GKK SK  KK GG K+RH
Subjt:  SNNSRRKSSWNRRPEDQVLRSSEGFFKKGVLDVKHLLGRA------PPRNSE-FRSCDFGNELGGGGGKGRKKVGKKNSKNKKKGGGKKQRH

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KEY3 Uncharacterized protein

2.5e-53

69.63

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Query:  MHSRDKSAKAGSSRSSTDMDSEMDYFKIKKEIGFLTSSHMSWKDKKDIQNRKVVSLGGKSQKKQRLPLSVARPIMKKQKEREQKMVLES---QRFGGVSS
        MHSRDK AKAGSSR STDM+++M    IKKEI FLTSSHMSWKDKK+I++RK+VSLGGK QKKQRLPLSVARPIMKKQKEREQKMV E    ++FGG++S
Subjt:  MHSRDKSAKAGSSRSSTDMDSEMDYFKIKKEIGFLTSSHMSWKDKKDIQNRKVVSLGGKSQKKQRLPLSVARPIMKKQKEREQKMVLES---QRFGGVSS

Query:  SNNSRRKSSWNRRPEDQVLRSSEGFFKKGVLDVKHLLGRAPPRNS-------EFRSCDFGNELGGGGGKGRKKVG-KKNSKNKKKGGGKKQ
        S+NS RKSS  RRPE+QVL+SSEGFFK GVLDVKHLL  +  RN+        FR+ DFGNE+   GG GR+K G KKN+K+KKKGGGKK+
Subjt:  SNNSRRKSSWNRRPEDQVLRSSEGFFKKGVLDVKHLLGRAPPRNS-------EFRSCDFGNELGGGGGKGRKKVG-KKNSKNKKKGGGKKQ

A0A1S3BNE0 uncharacterized protein LOC103491457

7.7e-55

71.2

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Query:  MHSRDKSAKAGSSRSSTDMDSEMDYFKIKKEIGFLTSSHMSWKDKKDIQNRKVVSLGGKSQKKQRLPLSVARPIMKKQKEREQKMVLES---QRFGGVSS
        MHSRDK AKAGSSR STDM+++M    IKKEI FLTSSHMSWKDKK+I++RK+VSLGGK QKKQRLPLSVARPIMKKQKEREQKMV E    ++FGG++S
Subjt:  MHSRDKSAKAGSSRSSTDMDSEMDYFKIKKEIGFLTSSHMSWKDKKDIQNRKVVSLGGKSQKKQRLPLSVARPIMKKQKEREQKMVLES---QRFGGVSS

Query:  SNNSRRKSSWNRRPEDQVLRSSEGFFKKGVLDVKHLL------GRAPPRNSE-FRSCDFGNELGGGGGKGRKKVG-KKNSKNKKKGGGKKQ
        S+NS RKSS  RRPE+QVL+SSEGFFK GVLDVKHLL         P RNS+ FR+ DFGNE+   GGKGR+K G KKN+K+KKKGGGKK+
Subjt:  SNNSRRKSSWNRRPEDQVLRSSEGFFKKGVLDVKHLL------GRAPPRNSE-FRSCDFGNELGGGGGKGRKKVG-KKNSKNKKKGGGKKQ

A0A6J1DHM3 uncharacterized protein LOC111020577

1.7e-49

65.57

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Query:  MHSRDKSAKAGSSRSSTDMDSEMDYFKIKKEIGFLTSSHMSWKDKKDIQNRKVVSLGGKSQKKQRLPLSVARPIMKKQKEREQKMVLESQRFGGVSSSNN
        MH RDKS + GSS  STD++ +M+   I KEI FLTSSHMSWKDKK+I+NRK+VSLGGK QKKQ+LPLSVARPIMKKQKEREQKM+ E    G   SS N
Subjt:  MHSRDKSAKAGSSRSSTDMDSEMDYFKIKKEIGFLTSSHMSWKDKKDIQNRKVVSLGGKSQKKQRLPLSVARPIMKKQKEREQKMVLESQRFGGVSSSNN

Query:  SRRKSSWNRRPEDQVLRSSEGFFKKGVLDVKHLLGRAPPRNSEF---RSCDFGNELGGGGGKGRKKVGKKNSKNKKKGGGKKQ
        + R+S   R+PEDQVLR SEG F+ GVLDVKHLL RAP RN++F   R+ DFGN++    GKGR+K GKK +K+KKKGGGKK+
Subjt:  SRRKSSWNRRPEDQVLRSSEGFFKKGVLDVKHLLGRAPPRNSEF---RSCDFGNELGGGGGKGRKKVGKKNSKNKKKGGGKKQ

A0A6J1FZ06 uncharacterized protein LOC111449125

1.4e-51

71.2

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Query:  MHSRDKSAKAGSSRSSTDMDSEMDYFKIKKEIGFLTSSHMSWKDKKDIQNRKVVSLGGKSQKKQRLPLSVARPIMKKQKEREQKMVLES---QRFGGVSS
        MHSRDKSAKAGSSR+STDM+  M+   IKKEI FLTSSHMSWKDKK+I++RK+VSLGGK QKKQRLPLSVARPIMKKQKEREQKMV E     +FGG +S
Subjt:  MHSRDKSAKAGSSRSSTDMDSEMDYFKIKKEIGFLTSSHMSWKDKKDIQNRKVVSLGGKSQKKQRLPLSVARPIMKKQKEREQKMVLES---QRFGGVSS

Query:  SNNSRRKSSWNRRPEDQVLRSSEGFFKKGVLDVKHLLGRAPPRNSEFRSCDFGNELGGGGGKGRKKVG-KKNSKNKKKGGGKKQ
        SN+S R S   R+PE+QVL+SSEGFFK GVLDVKHLL  AP RNS     DFGNE+    GKGR+K G KKN+K+ KKGGGKK+
Subjt:  SNNSRRKSSWNRRPEDQVLRSSEGFFKKGVLDVKHLLGRAPPRNSEFRSCDFGNELGGGGGKGRKKVG-KKNSKNKKKGGGKKQ

A0A6J1JBZ2 uncharacterized protein LOC111483659

2.6e-50

70.11

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Query:  MHSRDKSAKAGSSRSSTDMDSEMDYFKIKKEIGFLTSSHMSWKDKKDIQNRKVVSLGGKSQKKQRLPLSVARPIMKKQKEREQKMVLES---QRFGGVSS
        MHSRDKSAKAGSSR+STDM+  M+   IKKEI FLTSSHMSWKDKK+I++RK+VSLGGK QKKQRLPLSVARPI+KKQKEREQKMV E     +FGG++S
Subjt:  MHSRDKSAKAGSSRSSTDMDSEMDYFKIKKEIGFLTSSHMSWKDKKDIQNRKVVSLGGKSQKKQRLPLSVARPIMKKQKEREQKMVLES---QRFGGVSS

Query:  SNNSRRKSSWNRRPEDQVLRSSEGFFKKGVLDVKHLLGRAPPRNSEFRSCDFGNELGGGGGKGRKKVG-KKNSKNKKKGGGKKQ
        SN+S R S   R+PE QVL+SSEGFFK GVLDVKHLL  AP RNS     D GNE+    GKGR+K G KKN+K+ KKGGGKK+
Subjt:  SNNSRRKSSWNRRPEDQVLRSSEGFFKKGVLDVKHLLGRAPPRNSEFRSCDFGNELGGGGGKGRKKVG-KKNSKNKKKGGGKKQ

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G44820.1 unknown protein

6.5e-30

46.03

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Query:  KSAKAGSSRSSTDMDSEMDYFKIKKEIGFLTSSHMSWKDKKDIQNRKVVSLGGKSQKKQRLPLSVARPIMKKQKEREQKMVLES---QRFGGVSSSNNSR
        KS +       + +D  + +  I K++    SSHM+WKDKK ++++KV +LGGK+QK  RLPLSVAR  MKKQK+RE+KM+ ++    RFGG  SS  SR
Subjt:  KSAKAGSSRSSTDMDSEMDYFKIKKEIGFLTSSHMSWKDKKDIQNRKVVSLGGKSQKKQRLPLSVARPIMKKQKEREQKMVLES---QRFGGVSSSNNSR

Query:  RKSSWNRRPEDQVLRSSEGFFKKGVLDVKHLLGRAPPRNSE-----FRSCDFGNELGGGG------GKGRKKVGKKNSKNKKKGGGKKQ
        + +   R PE++VL+S+ G FK GVLDVKHLL   P  +S+      +       LGGGG       KG+KK GK  +K KKKGGGKK+
Subjt:  RKSSWNRRPEDQVLRSSEGFFKKGVLDVKHLLGRAPPRNSE-----FRSCDFGNELGGGG------GKGRKKVGKKNSKNKKKGGGKKQ

AT2G44820.2 unknown protein

6.5e-30

46.03

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Query:  KSAKAGSSRSSTDMDSEMDYFKIKKEIGFLTSSHMSWKDKKDIQNRKVVSLGGKSQKKQRLPLSVARPIMKKQKEREQKMVLES---QRFGGVSSSNNSR
        KS +       + +D  + +  I K++    SSHM+WKDKK ++++KV +LGGK+QK  RLPLSVAR  MKKQK+RE+KM+ ++    RFGG  SS  SR
Subjt:  KSAKAGSSRSSTDMDSEMDYFKIKKEIGFLTSSHMSWKDKKDIQNRKVVSLGGKSQKKQRLPLSVARPIMKKQKEREQKMVLES---QRFGGVSSSNNSR

Query:  RKSSWNRRPEDQVLRSSEGFFKKGVLDVKHLLGRAPPRNSE-----FRSCDFGNELGGGG------GKGRKKVGKKNSKNKKKGGGKKQ
        + +   R PE++VL+S+ G FK GVLDVKHLL   P  +S+      +       LGGGG       KG+KK GK  +K KKKGGGKK+
Subjt:  RKSSWNRRPEDQVLRSSEGFFKKGVLDVKHLLGRAPPRNSE-----FRSCDFGNELGGGG------GKGRKKVGKKNSKNKKKGGGKKQ

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCACTCCAGAGATAAAAGCGCAAAAGCCGGATCTTCTAGGAGCTCCACGGATATGGATTCTGAGATGGATTACTTTAAGATCAAGAAAGAAATCGGTTTCCTCACCTC
CTCGCATATGTCATGGAAAGACAAAAAGGATATTCAGAACAGAAAAGTTGTTTCTCTGGGTGGAAAGTCTCAAAAGAAACAAAGACTTCCTCTAAGTGTAGCACGTCCTA
TTATGAAGAAACAGAAGGAAAGAGAACAAAAGATGGTACTAGAGTCTCAACGATTTGGGGGTGTGTCGAGTAGCAACAATTCTAGAAGGAAATCCTCATGGAATCGCAGG
CCCGAGGACCAGGTTCTTAGGTCGAGCGAAGGCTTTTTTAAGAAAGGAGTGCTTGATGTCAAGCATCTACTAGGCCGAGCTCCTCCTAGGAATAGTGAATTTAGGAGTTG
TGACTTTGGAAATGAACTAGGAGGAGGAGGAGGTAAAGGCAGAAAAAAGGTGGGAAAAAAGAATAGTAAAAACAAGAAAAAGGGTGGTGGTAAGAAACAACGCCATTGA

mRNA sequence

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TACGTTAGGTTTTGATCACAGCTTTGGCGGCGCCTTCTTATTCTTCACTTTCGATTCGATTTTCCACAACTTGCTCGCCCGGCCGCCGTTGAACTCCGTGCTCGGCAGCG
TAAGAAAATGCACTCCAGAGATAAAAGCGCAAAAGCCGGATCTTCTAGGAGCTCCACGGATATGGATTCTGAGATGGATTACTTTAAGATCAAGAAAGAAATCGGTTTCC
TCACCTCCTCGCATATGTCATGGAAAGACAAAAAGGATATTCAGAACAGAAAAGTTGTTTCTCTGGGTGGAAAGTCTCAAAAGAAACAAAGACTTCCTCTAAGTGTAGCA
CGTCCTATTATGAAGAAACAGAAGGAAAGAGAACAAAAGATGGTACTAGAGTCTCAACGATTTGGGGGTGTGTCGAGTAGCAACAATTCTAGAAGGAAATCCTCATGGAA
TCGCAGGCCCGAGGACCAGGTTCTTAGGTCGAGCGAAGGCTTTTTTAAGAAAGGAGTGCTTGATGTCAAGCATCTACTAGGCCGAGCTCCTCCTAGGAATAGTGAATTTA
GGAGTTGTGACTTTGGAAATGAACTAGGAGGAGGAGGAGGTAAAGGCAGAAAAAAGGTGGGAAAAAAGAATAGTAAAAACAAGAAAAAGGGTGGTGGTAAGAAACAACGC
CATTGAAGTCGTTCAACTTAACAACATTCTTGTTTTACAATGGGGAGGGAGTACGAATATTGGTTATGTATTTATTCTGAGTTGCGGAATGGTACGAGCTTCGTGTGGGT
CTCTTTCTTTCTTTCTTTGGGACCCTGCTTTGTTTGTTCCTCTAATTTTGGTAACAGTTTATTTCAACAACAAAAAAGTTAAGTACATTACAAAAACTATGCAATTTTTA
AAATATTAGCAAAACTATCTTTAATTTGGAAAGAGAGGAATGCCACGATTTTTTTCCCCGGG

Protein sequence

Show/hide protein sequence

MHSRDKSAKAGSSRSSTDMDSEMDYFKIKKEIGFLTSSHMSWKDKKDIQNRKVVSLGGKSQKKQRLPLSVARPIMKKQKEREQKMVLESQRFGGVSSSNNSRRKSSWNRR
PEDQVLRSSEGFFKKGVLDVKHLLGRAPPRNSEFRSCDFGNELGGGGGKGRKKVGKKNSKNKKKGGGKKQRH

Sed0007255 (gene) of Chayote v1 genome