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Sed0007261 (gene) of Chayote v1 genome

Gene IDSed0007261
OrganismSechium edule (Chayote v1)
DescriptionROTUNDIFOLIA like 21
Genome locationLG06:38532753..38533439
RNA-Seq ExpressionSed0007261
SyntenySed0007261
Gene Ontology termsGO:0008285 - negative regulation of cell population proliferation (biological process)
GO:0048367 - shoot system development (biological process)
GO:0005886 - plasma membrane (cellular component)
InterPro domainsIPR012552 - DVL


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650571.1 hypothetical protein Csa_009769, partial [Cucumis sativus]6.0e-1375.44Show/hide
Query:  MSRNPKVGDSTMGEG--KKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD
        MSR+ K   ++MG+G  KK KKVSWRSRSS GGYI+EQ+GRLYIIRSCIVMLLCWHD
Subjt:  MSRNPKVGDSTMGEG--KKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD

XP_008461574.1 PREDICTED: uncharacterized protein LOC103500144 [Cucumis melo]7.1e-1478.95Show/hide
Query:  MSRNPKVGDSTMGEG--KKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD
        MSR+ K   ++MGEG  KK+KKVSWRSRSS GGYIREQ+GRLYIIRSCIVMLLCWHD
Subjt:  MSRNPKVGDSTMGEG--KKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD

XP_011651363.1 uncharacterized protein LOC105434872 [Cucumis sativus]6.0e-1375.44Show/hide
Query:  MSRNPKVGDSTMGEG--KKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD
        MSR+ K   ++MG+G  KK KKVSWRSRSS GGYI+EQ+GRLYIIRSCIVMLLCWHD
Subjt:  MSRNPKVGDSTMGEG--KKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD

XP_023528694.1 uncharacterized protein LOC111791542 [Cucurbita pepo subsp. pepo]3.0e-1279.59Show/hide
Query:  MGEGK-----KKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD
        MG+GK     K KKVSWRSRSS+G YIREQ+GRLYIIRSCIVMLLCWHD
Subjt:  MGEGK-----KKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD

XP_038906924.1 uncharacterized protein LOC120092787 [Benincasa hispida]2.2e-1584.21Show/hide
Query:  MSRNPK-VGDSTMGEGKKK-KKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD
        MSR+ K V  +TMGEGKKK KKVSWRSRSS GGYIREQ+GRLYIIRSCIVMLLCWHD
Subjt:  MSRNPK-VGDSTMGEGKKK-KKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD

TrEMBL top hitse value%identityAlignment
A0A1S3CFH9 uncharacterized protein LOC1035001443.5e-1478.95Show/hide
Query:  MSRNPKVGDSTMGEG--KKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD
        MSR+ K   ++MGEG  KK+KKVSWRSRSS GGYIREQ+GRLYIIRSCIVMLLCWHD
Subjt:  MSRNPKVGDSTMGEG--KKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD

A0A5D3CQM7 ROTUNDIFOLIA like 213.5e-1478.95Show/hide
Query:  MSRNPKVGDSTMGEG--KKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD
        MSR+ K   ++MGEG  KK+KKVSWRSRSS GGYIREQ+GRLYIIRSCIVMLLCWHD
Subjt:  MSRNPKVGDSTMGEG--KKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD

A0A6J1CQ69 uncharacterized protein LOC1110132961.9e-1276.79Show/hide
Query:  MSRNPKVGDSTMGEGKKKKKVSWR-SRSSYGGYIREQRGRLYIIRSCIVMLLCWHD
        MSR    G    GEG KKKKVSWR SRSS GGYIREQ+G+LYIIRSCIVMLLCWHD
Subjt:  MSRNPKVGDSTMGEGKKKKKVSWR-SRSSYGGYIREQRGRLYIIRSCIVMLLCWHD

A0A6J1F4S9 uncharacterized protein LOC1114421692.5e-1276.47Show/hide
Query:  MGEGK-------KKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD
        MG+GK       K KKVSWRSRSS+G YIREQ+GRLYIIRSCIVMLLCWHD
Subjt:  MGEGK-------KKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD

A0A6J1IZ09 uncharacterized protein LOC1114819521.6e-1173.47Show/hide
Query:  VGDSTMGEGKKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD
        +GD       K KKV WRSRSS+G YIREQ+GRLYIIRSCIVMLLCWHD
Subjt:  VGDSTMGEGKKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD

SwissProt top hitse value%identityAlignment
Q6IM95 Small polypeptide DEVIL 63.7e-0556.1Show/hide
Query:  GKKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD
        G  K++VS  S    GG +REQR +LYII+ C+VMLLCW D
Subjt:  GKKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD

Q6X5T8 Small polypeptide DEVIL 51.3e-0550Show/hide
Query:  KVGDSTMGEGKKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD
        K   S++G  K+K    W      GG +REQ+ +LYIIR C+VMLLCWHD
Subjt:  KVGDSTMGEGKKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD

Q6X5U0 Small polypeptide DEVIL 38.8e-0757.14Show/hide
Query:  EGKKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD
        +G KKK          GGY++EQ+GRLYIIR C+VML+CWHD
Subjt:  EGKKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD

Q6X5U1 Small polypeptide DEVIL 21.4e-0448.94Show/hide
Query:  DSTMGEGKKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD
        +S M   +K+KK   R     G Y++EQ+GR+YIIR C++MLLC HD
Subjt:  DSTMGEGKKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD

Q9SAF8 Small polypeptide DEVIL 42.8e-0552.27Show/hide
Query:  MGEGKKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD
        M  G  K++V   S    G  ++EQR +LYIIR C+VMLLCWHD
Subjt:  MGEGKKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD

Arabidopsis top hitse value%identityAlignment
AT1G13245.1 ROTUNDIFOLIA like 172.0e-0652.27Show/hide
Query:  MGEGKKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD
        M  G  K++V   S    G  ++EQR +LYIIR C+VMLLCWHD
Subjt:  MGEGKKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD

AT1G67265.1 ROTUNDIFOLIA like 216.2e-0857.14Show/hide
Query:  EGKKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD
        +G KKK          GGY++EQ+GRLYIIR C+VML+CWHD
Subjt:  EGKKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD

AT1G68825.1 ROTUNDIFOLIA like 159.0e-0750Show/hide
Query:  KVGDSTMGEGKKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD
        K   S++G  K+K    W      GG +REQ+ +LYIIR C+VMLLCWHD
Subjt:  KVGDSTMGEGKKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD

AT1G68825.2 ROTUNDIFOLIA like 159.0e-0750Show/hide
Query:  KVGDSTMGEGKKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD
        K   S++G  K+K    W      GG +REQ+ +LYIIR C+VMLLCWHD
Subjt:  KVGDSTMGEGKKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD

AT3G25717.1 ROTUNDIFOLIA like 162.6e-0656.1Show/hide
Query:  GKKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD
        G  K++VS  S    GG +REQR +LYII+ C+VMLLCW D
Subjt:  GKKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAGTAGAAACCCTAAAGTTGGAGATTCCACCATGGGAGAAGGGAAGAAGAAGAAGAAGGTTTCATGGAGATCGAGGTCATCTTATGGTGGTTATATTCGAGAGCA
AAGGGGAAGACTTTACATTATTCGAAGCTGCATCGTAATGCTCTTGTGCTGGCATGACTGA
mRNA sequenceShow/hide mRNA sequence
CAAAAAACCATTCTTCTTCTTCTTCTTGCCTACTTCCTCTTTTTTCCACTCCAAAATTTAATATTCAAAGGCCGACAAAATTTCTTGGGGGTTGAATCTCCAAATAAATG
CTCTTTCATACAAAGAGAGATAGTAAAAAAAAAAAAGAAAAAAAGATACATTTCTCTTCCACTTATATAAATTAAGAGCTCTACTATTGGCTTTCACAAAAGCCCTTGGC
CTTGCAAATCATAGAAAGAGAGCAAAAGGGTATTTGGTGGAAAAAGGTTAAAACAAGAAGAACACATGATGAGTAGAAACCCTAAAGTTGGAGATTCCACCATGGGAGAA
GGGAAGAAGAAGAAGAAGGTTTCATGGAGATCGAGGTCATCTTATGGTGGTTATATTCGAGAGCAAAGGGGAAGACTTTACATTATTCGAAGCTGCATCGTAATGCTCTT
GTGCTGGCATGACTGACTCCGAAGCGAGTATGATTTTTACGAGCTCGTATTAATGGAGATGTCGTTCAGTTTGAACTTTAATTTTGACAAATTTAGTTAGATTAGTGTGG
AGATGTGAAATGTTGTCTCTTTAGTCTAGAAAGTCCTTAGCCATTTTGCCATCTTCATATGTAAAAAGTAGATAGACAAAAAAATGGCTTCCTTTTGTGTTTCATAGGAA
GAGTAATGTTAGTTGTTTTTAGCCCAA
Protein sequenceShow/hide protein sequence
MMSRNPKVGDSTMGEGKKKKKVSWRSRSSYGGYIREQRGRLYIIRSCIVMLLCWHD