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Sed0007263 (gene) of Chayote v1 genome

Gene IDSed0007263
OrganismSechium edule (Chayote v1)
Descriptionthionin-like protein 2
Genome locationLG09:39000919..39002531
RNA-Seq ExpressionSed0007263
SyntenySed0007263
Gene Ontology termsNA
InterPro domainsIPR038975 - Thionin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008461039.1 PREDICTED: thionin-like protein 2 [Cucumis melo]8.0e-1542.73Show/hide
Query:  KWALLVTWLVLSWLTMVQSSALTDCYVPCFQNCDLQKP---HYCPDSCLRGCLAPK---DHPANLADTTQKNQFFCQLGCVTSTCTNLSSKENPAETQVE
        KWAL+  WL+L+ L+   S++  +CY  CF  C +        CP  CL+ C+ P    D    +    Q+N FFC+LGC  S+CT  S+K+NP E +VE
Subjt:  KWALLVTWLVLSWLTMVQSSALTDCYVPCFQNCDLQKP---HYCPDSCLRGCLAPK---DHPANLADTTQKNQFFCQLGCVTSTCTNLSSKENPAETQVE

Query:  SCVHSCSQTC
         CV SCSQTC
Subjt:  SCVHSCSQTC

XP_022953260.1 thionin-like protein 2 [Cucurbita moschata]2.7e-1545.37Show/hide
Query:  LVTWLVLSWLTMVQSSALTDCYVPCFQNCDLQKP---HYCPDSCLRGCLAPKDHPANLA-----DTTQKNQFFCQLGCVTSTCTNLSSKENPAETQVESC
        L+ WLVLS LT   S++  +CY  CF  C +        CP  CL+ C+ P     N A        QKNQFFC+LGC  S+CT  S+ +NPAE +V SC
Subjt:  LVTWLVLSWLTMVQSSALTDCYVPCFQNCDLQKP---HYCPDSCLRGCLAPKDHPANLA-----DTTQKNQFFCQLGCVTSTCTNLSSKENPAETQVESC

Query:  VHSCSQTC
        V SCS+TC
Subjt:  VHSCSQTC

XP_022992447.1 thionin-like protein 2 [Cucurbita maxima]1.6e-1544.86Show/hide
Query:  LVTWLVLSWLTMVQSSALTDCYVPCFQNCDLQKP---HYCPDSCLRGCLAPK----DHPANLADTTQKNQFFCQLGCVTSTCTNLSSKENPAETQVESCV
        L+ WLVLS LT   S++  +CY  CF  C +        CP  CL+ C+ P     +  A+     QKNQFFC+LGC  S+CT  S+++NPAE +V SCV
Subjt:  LVTWLVLSWLTMVQSSALTDCYVPCFQNCDLQKP---HYCPDSCLRGCLAPK----DHPANLADTTQKNQFFCQLGCVTSTCTNLSSKENPAETQVESCV

Query:  HSCSQTC
         SCS+TC
Subjt:  HSCSQTC

XP_023547567.1 thionin-like protein 2 [Cucurbita pepo subsp. pepo]4.2e-1645.79Show/hide
Query:  LVTWLVLSWLTMVQSSALTDCYVPCFQNCDLQKP---HYCPDSCLRGCLAPK----DHPANLADTTQKNQFFCQLGCVTSTCTNLSSKENPAETQVESCV
        L+ WLVLS LT   S++  +CY  CF  C +        CP  CL+ C+ P     +  A+     QKNQFFC+LGC TS+CT  S+ +NPAE +V SCV
Subjt:  LVTWLVLSWLTMVQSSALTDCYVPCFQNCDLQKP---HYCPDSCLRGCLAPK----DHPANLADTTQKNQFFCQLGCVTSTCTNLSSKENPAETQVESCV

Query:  HSCSQTC
         SCS+TC
Subjt:  HSCSQTC

XP_038899383.1 thionin-like protein 2 [Benincasa hispida]1.2e-1544.95Show/hide
Query:  KWALLVTWLVLSWLTMVQSSALTDCYVPCFQNCDLQKP---HYCPDSCLRGCLAPKDHPANLADT--TQKNQFFCQLGCVTSTCTNLSSKENPAETQVES
        KWA L+ WL+LS L+   S++  +CY  CF  C +        CP  CL+ C+ P   P +  D    ++NQFFC+LGC  S+CT  S+K+NPAE +V +
Subjt:  KWALLVTWLVLSWLTMVQSSALTDCYVPCFQNCDLQKP---HYCPDSCLRGCLAPKDHPANLADT--TQKNQFFCQLGCVTSTCTNLSSKENPAETQVES

Query:  CVHSCSQTC
        CV SCSQTC
Subjt:  CVHSCSQTC

TrEMBL top hitse value%identityAlignment
A0A067ECA0 Uncharacterized protein3.3e-1444.23Show/hide
Query:  ALLVTWLVLSWLTMVQSSALTDCYVPCFQNCDLQKPHY--CPDSCLRGCLAPKDHPANLADTTQKNQFFCQLGCVTSTCTNLSSKENPAETQVESCVHSC
        +LL+  LVL  L    +++  DCY  CF +C +   +   C   CL+ C+ P     NL D      FFC+LGC ++ CTNLS+KE+PAE +VESCV+SC
Subjt:  ALLVTWLVLSWLTMVQSSALTDCYVPCFQNCDLQKPHY--CPDSCLRGCLAPKDHPANLADTTQKNQFFCQLGCVTSTCTNLSSKENPAETQVESCVHSC

Query:  SQTC
        S+TC
Subjt:  SQTC

A0A0A0K781 Uncharacterized protein6.6e-1543.24Show/hide
Query:  KWALLVTWLVLSWLTMVQSSALTDCYVPCFQNCDLQKP---HYCPDSCLRGCLAPKDHPANLADTT----QKNQFFCQLGCVTSTCTNLSSKENPAETQV
        KWAL+  WL+L+ L+   S++  +CY  CF  C +        CP  CL+ C+ P   P + AD      Q+N FFC+LGC  S+CT  S+K+NP E +V
Subjt:  KWALLVTWLVLSWLTMVQSSALTDCYVPCFQNCDLQKP---HYCPDSCLRGCLAPKDHPANLADTT----QKNQFFCQLGCVTSTCTNLSSKENPAETQV

Query:  ESCVHSCSQTC
          CV SCSQTC
Subjt:  ESCVHSCSQTC

A0A1S3CDU4 thionin-like protein 23.9e-1542.73Show/hide
Query:  KWALLVTWLVLSWLTMVQSSALTDCYVPCFQNCDLQKP---HYCPDSCLRGCLAPK---DHPANLADTTQKNQFFCQLGCVTSTCTNLSSKENPAETQVE
        KWAL+  WL+L+ L+   S++  +CY  CF  C +        CP  CL+ C+ P    D    +    Q+N FFC+LGC  S+CT  S+K+NP E +VE
Subjt:  KWALLVTWLVLSWLTMVQSSALTDCYVPCFQNCDLQKP---HYCPDSCLRGCLAPK---DHPANLADTTQKNQFFCQLGCVTSTCTNLSSKENPAETQVE

Query:  SCVHSCSQTC
         CV SCSQTC
Subjt:  SCVHSCSQTC

A0A6J1GMH5 thionin-like protein 21.3e-1545.37Show/hide
Query:  LVTWLVLSWLTMVQSSALTDCYVPCFQNCDLQKP---HYCPDSCLRGCLAPKDHPANLA-----DTTQKNQFFCQLGCVTSTCTNLSSKENPAETQVESC
        L+ WLVLS LT   S++  +CY  CF  C +        CP  CL+ C+ P     N A        QKNQFFC+LGC  S+CT  S+ +NPAE +V SC
Subjt:  LVTWLVLSWLTMVQSSALTDCYVPCFQNCDLQKP---HYCPDSCLRGCLAPKDHPANLA-----DTTQKNQFFCQLGCVTSTCTNLSSKENPAETQVESC

Query:  VHSCSQTC
        V SCS+TC
Subjt:  VHSCSQTC

A0A6J1JZ84 thionin-like protein 27.8e-1644.86Show/hide
Query:  LVTWLVLSWLTMVQSSALTDCYVPCFQNCDLQKP---HYCPDSCLRGCLAPK----DHPANLADTTQKNQFFCQLGCVTSTCTNLSSKENPAETQVESCV
        L+ WLVLS LT   S++  +CY  CF  C +        CP  CL+ C+ P     +  A+     QKNQFFC+LGC  S+CT  S+++NPAE +V SCV
Subjt:  LVTWLVLSWLTMVQSSALTDCYVPCFQNCDLQKP---HYCPDSCLRGCLAPK----DHPANLADTTQKNQFFCQLGCVTSTCTNLSSKENPAETQVESCV

Query:  HSCSQTC
         SCS+TC
Subjt:  HSCSQTC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGTAGTAGGCAAGCCAAGTGGGCTTTGTTAGTGACGTGGCTGGTGCTGAGTTGGCTGACGATGGTCCAGTCATCAGCACTCACAGACTGCTACGTTCCTTGTTT
CCAAAACTGCGACTTGCAAAAGCCGCACTATTGTCCCGACTCTTGCCTACGTGGCTGCCTCGCCCCTAAAGACCACCCAGCTAATCTTGCTGACACGACGCAAAAGAATC
AATTCTTTTGCCAGCTCGGATGCGTCACTTCCACGTGTACCAATCTCAGCTCCAAGGAAAACCCAGCTGAAACCCAAGTGGAAAGTTGTGTGCATTCCTGCTCTCAGACA
TGCCTTCAGAAATCACCTGGAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGTAGTAGGCAAGCCAAGTGGGCTTTGTTAGTGACGTGGCTGGTGCTGAGTTGGCTGACGATGGTCCAGTCATCAGCACTCACAGACTGCTACGTTCCTTGTTT
CCAAAACTGCGACTTGCAAAAGCCGCACTATTGTCCCGACTCTTGCCTACGTGGCTGCCTCGCCCCTAAAGACCACCCAGCTAATCTTGCTGACACGACGCAAAAGAATC
AATTCTTTTGCCAGCTCGGATGCGTCACTTCCACGTGTACCAATCTCAGCTCCAAGGAAAACCCAGCTGAAACCCAAGTGGAAAGTTGTGTGCATTCCTGCTCTCAGACA
TGCCTTCAGAAATCACCTGGAACTTGA
Protein sequenceShow/hide protein sequence
MGSSRQAKWALLVTWLVLSWLTMVQSSALTDCYVPCFQNCDLQKPHYCPDSCLRGCLAPKDHPANLADTTQKNQFFCQLGCVTSTCTNLSSKENPAETQVESCVHSCSQT
CLQKSPGT