; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0007279 (gene) of Chayote v1 genome

Gene IDSed0007279
OrganismSechium edule (Chayote v1)
Description60S ribosomal protein L34
Genome locationLG08:1211972..1214555
RNA-Seq ExpressionSed0007279
SyntenySed0007279
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0042254 - ribosome biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR008195 - Ribosomal protein L34Ae
IPR018065 - Ribosomal protein L34e, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1208050.1 60S ribosomal protein L34 [Morella rubra]6.1e-5596.67Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVTSKS
        KIVKKVLKIQKAK+K+ SKS
Subjt:  KIVKKVLKIQKAKDKVTSKS

KAB1211609.1 60S ribosomal protein L34 [Morella rubra]6.1e-5597.5Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVTSKS
        KIVKKVLKIQKAK+K TSKS
Subjt:  KIVKKVLKIQKAKDKVTSKS

KAG6583599.1 Crooked neck-like protein 1, partial [Cucurbita argyrosperma subsp. sororia]4.7e-5597.5Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVTSKS
        KIVKKVLKIQKAK+K+ SKS
Subjt:  KIVKKVLKIQKAKDKVTSKS

XP_004138175.3 60S ribosomal protein L34 [Cucumis sativus]4.7e-5597.5Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVTSKS
        KIVKKVLKIQKAK+K+ SKS
Subjt:  KIVKKVLKIQKAKDKVTSKS

XP_010066914.2 60S ribosomal protein L34 [Eucalyptus grandis]3.6e-5597.5Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVTSKS
        KIVKKVLKIQKAKDK+ SKS
Subjt:  KIVKKVLKIQKAKDKVTSKS

TrEMBL top hitse value%identityAlignment
A0A6A1VA59 60S ribosomal protein L343.0e-5596.67Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVTSKS
        KIVKKVLKIQKAK+K+ SKS
Subjt:  KIVKKVLKIQKAKDKVTSKS

A0A6A1VFE7 60S ribosomal protein L343.0e-5597.5Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVTSKS
        KIVKKVLKIQKAK+K TSKS
Subjt:  KIVKKVLKIQKAKDKVTSKS

A0A6J1DF78 60S ribosomal protein L342.3e-5597.5Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVTSKS
        KIVKKVLKIQKAK+K+ SKS
Subjt:  KIVKKVLKIQKAKDKVTSKS

A0A6J1HLN7 60S ribosomal protein L34-like2.3e-5597.5Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVTSKS
        KIVKKVLKIQKAK+K+ SKS
Subjt:  KIVKKVLKIQKAKDKVTSKS

A0A6J1I6I6 60S ribosomal protein L34-like2.3e-5597.5Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVTSKS
        KIVKKVLKIQKAK+K+ SKS
Subjt:  KIVKKVLKIQKAKDKVTSKS

SwissProt top hitse value%identityAlignment
P40590 60S ribosomal protein L342.9e-5592.5Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYR+RHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVTSKS
        KIVKKVLKIQK K+K  +K+
Subjt:  KIVKKVLKIQKAKDKVTSKS

P41098 60S ribosomal protein L341.7e-5592.5Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVTSKS
        KIVKKVLKIQKAK+K+ +KS
Subjt:  KIVKKVLKIQKAKDKVTSKS

Q42351 60S ribosomal protein L34-11.9e-5490.83Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVTSKS
        KIVKKVLK+QKAK+KV  K+
Subjt:  KIVKKVLKIQKAKDKVTSKS

Q9FE65 60S ribosomal protein L34-29.2e-5490.76Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVTSK
        KIVKKVLK+QKAK+KV  K
Subjt:  KIVKKVLKIQKAKDKVTSK

Q9LJW6 60S ribosomal protein L34-36.0e-5389.17Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARN RTVNRAYGGVLSG AVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVTSKS
        KIVKKVLK+QKAK+K   KS
Subjt:  KIVKKVLKIQKAKDKVTSKS

Arabidopsis top hitse value%identityAlignment
AT1G26880.1 Ribosomal protein L34e superfamily protein1.3e-5590.83Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVTSKS
        KIVKKVLK+QKAK+KV  K+
Subjt:  KIVKKVLKIQKAKDKVTSKS

AT1G26880.2 Ribosomal protein L34e superfamily protein1.5e-4391.3Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII
        MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNRAYGGVLSG AVRER +
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII

AT1G69620.1 ribosomal protein L346.5e-5590.76Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVTSK
        KIVKKVLK+QKAK+KV  K
Subjt:  KIVKKVLKIQKAKDKVTSK

AT3G28900.1 Ribosomal protein L34e superfamily protein4.2e-5489.17Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARN RTVNRAYGGVLSG AVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVTSKS
        KIVKKVLK+QKAK+K   KS
Subjt:  KIVKKVLKIQKAKDKVTSKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAGCGTCTCACATACCGCAAGCGCCATAGCTACGCTACCAAGTCTAATCAGCACCGCGTCGTCAAAACCCCTGGCGGGAAGCTTGTGTACCAGACTACCAAGAA
ACGAGCCAGTGGACCTAAATGTCCGGTCACCGGCAAAAGGATTCAGGGAATTCCTCACTTGAGGCCTGCTGAATATAAGAGGTCTAGACTGGCTCGGAACCGGAGGACTG
TGAACCGTGCATACGGTGGCGTTTTATCTGGCGGTGCTGTGAGGGAGAGGATCATTCGAGCCTTTTTGGTGGAAGAGCAAAAGATTGTGAAGAAGGTGTTGAAGATTCAG
AAGGCAAAGGATAAGGTGACATCAAAGAGCTAA
mRNA sequenceShow/hide mRNA sequence
GGGCAAAGGAGTCGTCTTCTTAGTGTTGTTATCTCCTCCTCCAAAATTCAGTAAAAATTGTCTGCAACAGCCTGTTGGACCAGAACCACCAAGATCGAGAAAGAGTGAAG
AATCGTTCGAGATGGTTCAGCGTCTCACATACCGCAAGCGCCATAGCTACGCTACCAAGTCTAATCAGCACCGCGTCGTCAAAACCCCTGGCGGGAAGCTTGTGTACCAG
ACTACCAAGAAACGAGCCAGTGGACCTAAATGTCCGGTCACCGGCAAAAGGATTCAGGGAATTCCTCACTTGAGGCCTGCTGAATATAAGAGGTCTAGACTGGCTCGGAA
CCGGAGGACTGTGAACCGTGCATACGGTGGCGTTTTATCTGGCGGTGCTGTGAGGGAGAGGATCATTCGAGCCTTTTTGGTGGAAGAGCAAAAGATTGTGAAGAAGGTGT
TGAAGATTCAGAAGGCAAAGGATAAGGTGACATCAAAGAGCTAAATTCATTGTGGTTCTGTTTTTTAGGAATTTGAAGCAAGTTTTGACCTTTCTTTTGTGACTTGATGT
TGAATTCTTCCAATTACTAAACTATCTTGAAGTTTGGTTTGGAAGATATGAGATTTTAGTTCCAGAATTCATCTTTAATTGATGTGGTATACACTTAAATGATATATTTG
TAATTTTTTTGTTTTTCAAATCAAATGATTGATTCTTGTC
Protein sequenceShow/hide protein sequence
MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQ
KAKDKVTSKS