; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0007304 (gene) of Chayote v1 genome

Gene IDSed0007304
OrganismSechium edule (Chayote v1)
DescriptionE3 ubiquitin-protein ligase RBBP6 isoform X2
Genome locationLG02:48927413..48929335
RNA-Seq ExpressionSed0007304
SyntenySed0007304
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022956118.1 uncharacterized protein LOC111457905 isoform X1 [Cucurbita moschata]2.6e-5075.46Show/hide
Query:  MEDLTEEERRALRGSKFAPLPSQPTSSSRSLPRLAHPGGPLKTNKAAALAKFLERKRHQDPHALSSINPRILDLALRNAKASVLSSGTSGSGTNIRHVDS
        MEDL+EEERRALRGSKFAPLPSQPT SSRS PRLAHPGGPLKTNKAAALAKFL+RK HQDP+ LSSINP+IL+LA+RNAKASVLSS    SGTNIRHVD+
Subjt:  MEDLTEEERRALRGSKFAPLPSQPTSSSRSLPRLAHPGGPLKTNKAAALAKFLERKRHQDPHALSSINPRILDLALRNAKASVLSSGTSGSGTNIRHVDS

Query:  FDDPEVSLDEEEAKNSKPKKQKNK----KKNKHKR-------QKIVEDSDCGVGKKLRKKLAL
        FDDPE S D+ EA NS+PKKQKNK    KKNK+K+       +KIVEDS CGVGK+ +KKL L
Subjt:  FDDPEVSLDEEEAKNSKPKKQKNK----KKNKHKR-------QKIVEDSDCGVGKKLRKKLAL
XP_022956119.1 uncharacterized protein LOC111457905 isoform X2 [Cucurbita moschata]3.1e-5175.93Show/hide
Query:  MEDLTEEERRALRGSKFAPLPSQPTSSSRSLPRLAHPGGPLKTNKAAALAKFLERKRHQDPHALSSINPRILDLALRNAKASVLSSGTSGSGTNIRHVDS
        MEDL+EEERRALRGSKFAPLPSQPT SSRS PRLAHPGGPLKTNKAAALAKFL+RK HQDP+ LSSINP+IL+LA+RNAKASVLSS    SGTNIRHVD+
Subjt:  MEDLTEEERRALRGSKFAPLPSQPTSSSRSLPRLAHPGGPLKTNKAAALAKFLERKRHQDPHALSSINPRILDLALRNAKASVLSSGTSGSGTNIRHVDS

Query:  FDDPEVSLDEEEAKNSKPKKQKNKKK----------NKHKRQKIVEDSDCGVGKKLRKKLAL
        FDDPE S D+ EA NS+PKKQKNK K           K+KRQKIVEDS CGVGK+ +KKL L
Subjt:  FDDPEVSLDEEEAKNSKPKKQKNKKK----------NKHKRQKIVEDSDCGVGKKLRKKLAL
XP_022979960.1 uncharacterized protein LOC111479494 [Cucurbita maxima]1.8e-5176.88Show/hide
Query:  MEDLTEEERRALRGSKFAPLPSQPTSSSRSLPRLAHPGGPLKTNKAAALAKFLERKRHQDPHALSSINPRILDLALRNAKASVLSSGTSGSGTNIRHVDS
        MEDL+EEERRALRGSKFAPLPSQPT SSRS PRLAHPGGPLKTNKAAALAKFL+RK HQDP+ LSSINP+IL+LA+RNAKASVLSS    SGTNIRHVD+
Subjt:  MEDLTEEERRALRGSKFAPLPSQPTSSSRSLPRLAHPGGPLKTNKAAALAKFLERKRHQDPHALSSINPRILDLALRNAKASVLSSGTSGSGTNIRHVDS

Query:  FDDPEVSLDEEEAKNSKPKKQKNKKK--------NKHKRQKIVEDSDCGVGKKLRKKLAL
        FDDPE S D+ EA NS+PKKQKNK K         K+KRQKIVEDS CGVGK+ +KKL L
Subjt:  FDDPEVSLDEEEAKNSKPKKQKNKKK--------NKHKRQKIVEDSDCGVGKKLRKKLAL
XP_023527659.1 uncharacterized protein LOC111790822 isoform X1 [Cucurbita pepo subsp. pepo]3.7e-5276.07Show/hide
Query:  MEDLTEEERRALRGSKFAPLPSQPTSSSRSLPRLAHPGGPLKTNKAAALAKFLERKRHQDPHALSSINPRILDLALRNAKASVLSSGTSGSGTNIRHVDS
        MEDL+EEERRALRGSKFAPLPSQPTSSSRS PRLAHPGGPLKTNKAAALAKFL+RK HQDP+ LSSINP+IL+LA+RNAKASVLSS    SGTNIRHVD+
Subjt:  MEDLTEEERRALRGSKFAPLPSQPTSSSRSLPRLAHPGGPLKTNKAAALAKFLERKRHQDPHALSSINPRILDLALRNAKASVLSSGTSGSGTNIRHVDS

Query:  FDDPEVSLDEEEAKNSKPKKQKNK----KKNKHKR-------QKIVEDSDCGVGKKLRKKLAL
        FDDPE S D+ EA NS+PKKQKNK    KKNK+K+       +KIVEDS CGVGK+ +KKL L
Subjt:  FDDPEVSLDEEEAKNSKPKKQKNK----KKNKHKR-------QKIVEDSDCGVGKKLRKKLAL
XP_038890855.1 uncharacterized protein LOC120080295 [Benincasa hispida]3.0e-5480.13Show/hide
Query:  MEDLTEEERRALRGSKFAPLPSQPTSSSRSLPRLAHPGGPLKTNKAAALAKFLERKRHQDPHALSSINPRILDLALRNAKASVLSSGTSGSGTNIRHVDS
        MEDLTEEERRALRGSKFAPLPSQ T SSRS PRLAHPGGPLKTNKAAALAKFL+RK HQDP+ALSSI+P+ILDLA+RNAKASVLS G+SGSGTNIRHVD+
Subjt:  MEDLTEEERRALRGSKFAPLPSQPTSSSRSLPRLAHPGGPLKTNKAAALAKFLERKRHQDPHALSSINPRILDLALRNAKASVLSSGTSGSGTNIRHVDS

Query:  FDDPEVSLDEEEAKNSKPKKQKNKKK----NKHKRQKIVEDSDCGVGKKLRKKLAL
        FDDPE SLD+ EA NS+P++QK KKK     K+KRQKIV DS CGVGKK +KKL L
Subjt:  FDDPEVSLDEEEAKNSKPKKQKNKKK----NKHKRQKIVEDSDCGVGKKLRKKLAL
TrEMBL top hitse value%identityAlignment
A0A0A0LAK0 Uncharacterized protein6.3e-5076.25Show/hide
Query:  MAMEDLTEEERRALRGSKFAPLPSQPTSSSRSLPRLAHPGGPLKTNKAAALAKFLERKRHQDPHALSSINPRILDLALRNAKASVLSSGTSGSGTNIRHV
        M MEDLTEEERRALRGSKFAPLPSQ T SSRS PRLAHPGGPLKTNKAAALAKFL RK +QDP+ALSSINP+ILDLA+RNAKASV S     SGTNIRHV
Subjt:  MAMEDLTEEERRALRGSKFAPLPSQPTSSSRSLPRLAHPGGPLKTNKAAALAKFLERKRHQDPHALSSINPRILDLALRNAKASVLSSGTSGSGTNIRHV

Query:  DSFDDPEVSLDEEEAKNSKPKKQKNK------KKNKHKRQKIVEDSDCGVGKKLRKKLAL
        D+FDDPE S DE E+ NS+PKKQK K      K  K+KRQKIVEDS+CGVG K +KKL L
Subjt:  DSFDDPEVSLDEEEAKNSKPKKQKNK------KKNKHKRQKIVEDSDCGVGKKLRKKLAL
A0A1S3AY37 uncharacterized protein LOC1034838321.2e-4875.8Show/hide
Query:  MAMEDLTEEERRALRGSKFAPLPSQPTSSSRSLPRLAHPGGPLKTNKAAALAKFLERKRHQDPHALSSINPRILDLALRNAKASVLSSGTSGSGTNIRHV
        M MEDLTEEERRALRGSKFAPLPSQ T SSRS PRLAHPGGPLKTNKAAALAKFL RK HQDP+A SSINP+ILDLA+RNAKASV S     SGTNIRHV
Subjt:  MAMEDLTEEERRALRGSKFAPLPSQPTSSSRSLPRLAHPGGPLKTNKAAALAKFLERKRHQDPHALSSINPRILDLALRNAKASVLSSGTSGSGTNIRHV

Query:  DSFDDPEVSLDEEEAKNSKPKKQKNK------KKNKHKRQKIVEDSDCGVGKKLRKK
        D+FDDPE S DE E+ NS+PKKQK K      K  K+KRQKIVEDS+CGVGK    K
Subjt:  DSFDDPEVSLDEEEAKNSKPKKQKNK------KKNKHKRQKIVEDSDCGVGKKLRKK
A0A6J1GVW4 uncharacterized protein LOC111457905 isoform X11.3e-5075.46Show/hide
Query:  MEDLTEEERRALRGSKFAPLPSQPTSSSRSLPRLAHPGGPLKTNKAAALAKFLERKRHQDPHALSSINPRILDLALRNAKASVLSSGTSGSGTNIRHVDS
        MEDL+EEERRALRGSKFAPLPSQPT SSRS PRLAHPGGPLKTNKAAALAKFL+RK HQDP+ LSSINP+IL+LA+RNAKASVLSS    SGTNIRHVD+
Subjt:  MEDLTEEERRALRGSKFAPLPSQPTSSSRSLPRLAHPGGPLKTNKAAALAKFLERKRHQDPHALSSINPRILDLALRNAKASVLSSGTSGSGTNIRHVDS

Query:  FDDPEVSLDEEEAKNSKPKKQKNK----KKNKHKR-------QKIVEDSDCGVGKKLRKKLAL
        FDDPE S D+ EA NS+PKKQKNK    KKNK+K+       +KIVEDS CGVGK+ +KKL L
Subjt:  FDDPEVSLDEEEAKNSKPKKQKNK----KKNKHKR-------QKIVEDSDCGVGKKLRKKLAL
A0A6J1GY51 uncharacterized protein LOC111457905 isoform X21.5e-5175.93Show/hide
Query:  MEDLTEEERRALRGSKFAPLPSQPTSSSRSLPRLAHPGGPLKTNKAAALAKFLERKRHQDPHALSSINPRILDLALRNAKASVLSSGTSGSGTNIRHVDS
        MEDL+EEERRALRGSKFAPLPSQPT SSRS PRLAHPGGPLKTNKAAALAKFL+RK HQDP+ LSSINP+IL+LA+RNAKASVLSS    SGTNIRHVD+
Subjt:  MEDLTEEERRALRGSKFAPLPSQPTSSSRSLPRLAHPGGPLKTNKAAALAKFLERKRHQDPHALSSINPRILDLALRNAKASVLSSGTSGSGTNIRHVDS

Query:  FDDPEVSLDEEEAKNSKPKKQKNKKK----------NKHKRQKIVEDSDCGVGKKLRKKLAL
        FDDPE S D+ EA NS+PKKQKNK K           K+KRQKIVEDS CGVGK+ +KKL L
Subjt:  FDDPEVSLDEEEAKNSKPKKQKNKKK----------NKHKRQKIVEDSDCGVGKKLRKKLAL
A0A6J1IUT6 uncharacterized protein LOC1114794948.8e-5276.88Show/hide
Query:  MEDLTEEERRALRGSKFAPLPSQPTSSSRSLPRLAHPGGPLKTNKAAALAKFLERKRHQDPHALSSINPRILDLALRNAKASVLSSGTSGSGTNIRHVDS
        MEDL+EEERRALRGSKFAPLPSQPT SSRS PRLAHPGGPLKTNKAAALAKFL+RK HQDP+ LSSINP+IL+LA+RNAKASVLSS    SGTNIRHVD+
Subjt:  MEDLTEEERRALRGSKFAPLPSQPTSSSRSLPRLAHPGGPLKTNKAAALAKFLERKRHQDPHALSSINPRILDLALRNAKASVLSSGTSGSGTNIRHVDS

Query:  FDDPEVSLDEEEAKNSKPKKQKNKKK--------NKHKRQKIVEDSDCGVGKKLRKKLAL
        FDDPE S D+ EA NS+PKKQKNK K         K+KRQKIVEDS CGVGK+ +KKL L
Subjt:  FDDPEVSLDEEEAKNSKPKKQKNKKK--------NKHKRQKIVEDSDCGVGKKLRKKLAL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G18540.1 unknown protein1.0e-3656.44Show/hide
Query:  EDLTEEERRALRGSKFAPLPSQPTSSSRSLPRLAHPGGPLKTNKAAALAKFLERKRHQDPHALSSINPRILDLALRNAKASVLSSGTSGSGTNIRHVDSF
        E+LTE+E+RALRGSKFAPL S P+SS    PRLAHPGGPLKTNKAAALAKFLERK  QDP+ L+SI+P +++LA++NAK +V+SSG S SG  I+HV SF
Subjt:  EDLTEEERRALRGSKFAPLPSQPTSSSRSLPRLAHPGGPLKTNKAAALAKFLERKRHQDPHALSSINPRILDLALRNAKASVLSSGTSGSGTNIRHVDSF

Query:  DDPEVSLDEEEAKNS------------KPKKQKNKKKNKHKRQKIVEDSDCGVGKKLRKKLAL
        +D EVS D+++ +N+            K K++K KKKNK  +Q+I  D D  + K+  KKL L
Subjt:  DDPEVSLDEEEAKNS------------KPKKQKNKKKNKHKRQKIVEDSDCGVGKKLRKKLAL
AT5G18540.2 unknown protein6.0e-3757.14Show/hide
Query:  EDLTEEERRALRGSKFAPLPSQPTSSSRSLPRLAHPGGPLKTNKAAALAKFLERKRHQDPHALSSINPRILDLALRNAKASVLSSGTSGSGTNIRHVDSF
        E+LTE+E+RALRGSKFAPL S P+SS    PRLAHPGGPLKTNKAAALAKFLERK  QDP+ L+SI+P +++LA++NAK +V+SSG S SG  I+HV SF
Subjt:  EDLTEEERRALRGSKFAPLPSQPTSSSRSLPRLAHPGGPLKTNKAAALAKFLERKRHQDPHALSSINPRILDLALRNAKASVLSSGTSGSGTNIRHVDSF

Query:  DDPEVSLDEEEAKNSK----------PKKQKNKKKNKHKRQKIVEDSDCGVGKKLRKKLAL
        +D EVS D+++ +N+K           KK++ KKK K+K+ KI  D D  + K+  KKL L
Subjt:  DDPEVSLDEEEAKNSK----------PKKQKNKKKNKHKRQKIVEDSDCGVGKKLRKKLAL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGGAGGATCTTACCGAAGAAGAAAGGCGTGCTTTGCGGGGCAGCAAATTCGCGCCTCTGCCATCGCAGCCCACTTCTTCCTCTCGATCTCTCCCAAGGTTGGC
TCACCCTGGTGGACCGTTGAAGACCAACAAGGCTGCGGCTCTGGCTAAGTTCCTCGAGCGGAAGCGGCACCAAGACCCCCACGCTCTCTCTTCCATCAATCCTCGCATTT
TGGACCTCGCCCTCAGAAACGCCAAAGCCTCTGTTCTTTCCAGTGGCACTTCAGGTTCTGGCACAAATATTCGCCACGTGGATTCATTTGATGATCCTGAGGTTTCTTTG
GATGAAGAGGAAGCCAAGAATTCCAAGCCTAAAAAACAAAAGAACAAGAAGAAAAACAAGCATAAGAGGCAAAAGATTGTTGAGGACTCCGACTGTGGCGTCGGGAAAAA
GCTCAGAAAGAAGTTGGCATTGTGA
mRNA sequenceShow/hide mRNA sequence
AAGCATATAATCAGAAAGAAAATAGAAGTTAGCATATTGGACACGTGGTGGTTGAGGTGGGCGAAGTGGGGCGACAAGATCTGAGAGAGTGAATTAGAAACCCTAATTCT
GCAATCTTCATCCATGGCGATGGAGGATCTTACCGAAGAAGAAAGGCGTGCTTTGCGGGGCAGCAAATTCGCGCCTCTGCCATCGCAGCCCACTTCTTCCTCTCGATCTC
TCCCAAGGTTGGCTCACCCTGGTGGACCGTTGAAGACCAACAAGGCTGCGGCTCTGGCTAAGTTCCTCGAGCGGAAGCGGCACCAAGACCCCCACGCTCTCTCTTCCATC
AATCCTCGCATTTTGGACCTCGCCCTCAGAAACGCCAAAGCCTCTGTTCTTTCCAGTGGCACTTCAGGTTCTGGCACAAATATTCGCCACGTGGATTCATTTGATGATCC
TGAGGTTTCTTTGGATGAAGAGGAAGCCAAGAATTCCAAGCCTAAAAAACAAAAGAACAAGAAGAAAAACAAGCATAAGAGGCAAAAGATTGTTGAGGACTCCGACTGTG
GCGTCGGGAAAAAGCTCAGAAAGAAGTTGGCATTGTGAGCTGAAAACGAGACATGAATATCCTTGTAATCTGGAAATATTCAGTCTTCAGAAGATTGAGGAACAAAACTT
GAAAGGAGTTAGCATGTGGTGTATTTTTTTTTGGGTGGAAAGACGAGCATTTTGGAAGCAAGGCAGCTTTTAATAAGCTCTATAGGGTTGCTGTTCCTGATATTTTGAAC
AAGGAGAACTATTAAATATCTCAGATTCAAGAGTTTAAACCACTTGATTTGATCTGATTTCTCTCTTTCTCTTGTTGCAACATTCTTTAAATCCAATGGC
Protein sequenceShow/hide protein sequence
MAMEDLTEEERRALRGSKFAPLPSQPTSSSRSLPRLAHPGGPLKTNKAAALAKFLERKRHQDPHALSSINPRILDLALRNAKASVLSSGTSGSGTNIRHVDSFDDPEVSL
DEEEAKNSKPKKQKNKKKNKHKRQKIVEDSDCGVGKKLRKKLAL